Protein–RNA interactions for Protein: P09633

Hoxc9, Homeobox protein Hox-C9, mousemouse

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc9P09633 AC174678.1-201ENSMUST00000228007 2749 ntBASIC18.87■□□□□ 0.61
Hoxc9P09633 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Hoxc9P09633 Abcf2-201ENSMUST00000030795 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Hoxc9P09633 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
Hoxc9P09633 Cyp2a5-201ENSMUST00000005685 2013 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Hoxc9P09633 Chaf1b-202ENSMUST00000117099 1894 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
Hoxc9P09633 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Hoxc9P09633 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
Hoxc9P09633 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Hoxc9P09633 Slc35c1-202ENSMUST00000125276 2668 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Hoxc9P09633 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Hoxc9P09633 Hoxa7-203ENSMUST00000140316 643 ntTSL 3 BASIC18.86■□□□□ 0.61
Hoxc9P09633 Gm13066-201ENSMUST00000145263 884 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Hoxc9P09633 2210408F21Rik-214ENSMUST00000155345 1022 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Hoxc9P09633 Gm28942-201ENSMUST00000186334 365 ntTSL 3 BASIC18.86■□□□□ 0.61
Hoxc9P09633 Lyzl6-201ENSMUST00000021328 900 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Hoxc9P09633 AC162801.1-201ENSMUST00000220612 198 ntBASIC18.86■□□□□ 0.61
Hoxc9P09633 AC099934.3-201ENSMUST00000223192 1147 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Hoxc9P09633 Tmem219-201ENSMUST00000032926 941 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Hoxc9P09633 Nupr1-201ENSMUST00000032961 829 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Hoxc9P09633 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC18.86■□□□□ 0.61
Hoxc9P09633 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Hoxc9P09633 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Hoxc9P09633 Cyp4x1os-201ENSMUST00000153951 2003 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Hoxc9P09633 4930402H24Rik-202ENSMUST00000110243 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Hoxc9P09633 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC18.86■□□□□ 0.61
Hoxc9P09633 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
Hoxc9P09633 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Hoxc9P09633 Cd300lf-203ENSMUST00000106562 1762 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Hoxc9P09633 Ash2l-201ENSMUST00000068892 3307 ntAPPRIS P4 TSL 1 (best) BASIC18.85■□□□□ 0.61
Hoxc9P09633 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
Hoxc9P09633 Gm14452-201ENSMUST00000118680 1632 ntBASIC18.85■□□□□ 0.61
Hoxc9P09633 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Hoxc9P09633 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Hoxc9P09633 Aldh1b1-201ENSMUST00000044384 2298 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Hoxc9P09633 Eml3-202ENSMUST00000224272 2978 ntAPPRIS ALT2 BASIC18.85■□□□□ 0.61
Hoxc9P09633 Slc5a5-201ENSMUST00000000809 2928 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Hoxc9P09633 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Hoxc9P09633 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Hoxc9P09633 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Hoxc9P09633 Dtd2-201ENSMUST00000021339 2564 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Hoxc9P09633 Plekhb1-206ENSMUST00000107047 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Hoxc9P09633 Tmem176b-201ENSMUST00000101429 1238 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
Hoxc9P09633 Gm15678-201ENSMUST00000117573 960 ntBASIC18.85■□□□□ 0.61
Hoxc9P09633 Rapgef3os2-201ENSMUST00000124374 920 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Hoxc9P09633 Cenpa-206ENSMUST00000149759 346 ntTSL 3 BASIC18.85■□□□□ 0.61
Hoxc9P09633 Atp5j2-202ENSMUST00000161741 955 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Hoxc9P09633 Ucma-204ENSMUST00000167607 785 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Hoxc9P09633 Flg-208ENSMUST00000180308 1076 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Hoxc9P09633 Blvra-201ENSMUST00000002064 1160 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Hoxc9P09633 AC166574.6-201ENSMUST00000227889 1806 ntBASIC18.85■□□□□ 0.61
Hoxc9P09633 Prss44-201ENSMUST00000098345 1838 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Hoxc9P09633 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Hoxc9P09633 Arid5a-201ENSMUST00000097778 2270 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Hoxc9P09633 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Hoxc9P09633 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Hoxc9P09633 Zyx-207ENSMUST00000203652 2605 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
Hoxc9P09633 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
Hoxc9P09633 Sec24a-203ENSMUST00000109092 2094 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Hoxc9P09633 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Hoxc9P09633 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Hoxc9P09633 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
Hoxc9P09633 Uqcrq-203ENSMUST00000109021 405 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Hoxc9P09633 Sumo2-204ENSMUST00000118155 884 ntTSL 2 BASIC18.84■□□□□ 0.61
Hoxc9P09633 Gm15957-201ENSMUST00000118893 974 ntBASIC18.84■□□□□ 0.61
Hoxc9P09633 Pisd-ps1-201ENSMUST00000119128 1115 ntBASIC18.84■□□□□ 0.61
Hoxc9P09633 Gm21887-201ENSMUST00000178789 441 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
Hoxc9P09633 Platr12-202ENSMUST00000189722 549 ntTSL 3 BASIC18.84■□□□□ 0.61
Hoxc9P09633 Tcta-203ENSMUST00000195615 597 ntTSL 5 BASIC18.84■□□□□ 0.61
Hoxc9P09633 Sftpa1-201ENSMUST00000022314 851 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Hoxc9P09633 AC149294.4-201ENSMUST00000227870 882 ntBASIC18.84■□□□□ 0.61
Hoxc9P09633 Akr1b7-201ENSMUST00000007449 1281 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Hoxc9P09633 Ap2s1-201ENSMUST00000086112 836 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Hoxc9P09633 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Hoxc9P09633 3830417A13Rik-201ENSMUST00000033522 1649 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Hoxc9P09633 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Hoxc9P09633 Acadm-201ENSMUST00000072697 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Hoxc9P09633 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Hoxc9P09633 Ddb2-201ENSMUST00000028696 1557 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Hoxc9P09633 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Hoxc9P09633 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Hoxc9P09633 Gjb4-202ENSMUST00000106090 1446 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.61
Hoxc9P09633 4930473A02Rik-202ENSMUST00000136793 1409 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Hoxc9P09633 Gjb4-201ENSMUST00000060419 1445 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Hoxc9P09633 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.61
Hoxc9P09633 Fkbp10-201ENSMUST00000001595 2584 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Hoxc9P09633 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
Hoxc9P09633 Gm17409-201ENSMUST00000167423 962 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
Hoxc9P09633 Gm5354-201ENSMUST00000182417 973 ntBASIC18.83■□□□□ 0.6
Hoxc9P09633 Gm37748-201ENSMUST00000194379 1140 ntBASIC18.83■□□□□ 0.6
Hoxc9P09633 Gm42918-201ENSMUST00000199249 1580 ntBASIC18.83■□□□□ 0.6
Hoxc9P09633 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Hoxc9P09633 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
Hoxc9P09633 Adam15-202ENSMUST00000074582 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Hoxc9P09633 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Hoxc9P09633 Sept8-202ENSMUST00000117061 4563 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
Hoxc9P09633 Slc22a18-201ENSMUST00000052348 1525 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Hoxc9P09633 Fam174b-201ENSMUST00000107456 2683 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Hoxc9P09633 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Hoxc9P09633 Gm16279-201ENSMUST00000149452 2945 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 22 ms