Protein–RNA interactions for Protein: P09632

Hoxb8, Homeobox protein Hox-B8, mousemouse

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxb8P09632 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Hoxb8P09632 Rrp8-201ENSMUST00000033179 3053 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
Hoxb8P09632 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Hoxb8P09632 Mapk8ip3-203ENSMUST00000115229 5603 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.08
Hoxb8P09632 Oser1-202ENSMUST00000104954 1702 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Hoxb8P09632 Rtn4-201ENSMUST00000060992 1773 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Hoxb8P09632 Tpt1-ps6-201ENSMUST00000121768 523 ntBASIC15.58■□□□□ 0.08
Hoxb8P09632 Gm13383-201ENSMUST00000131190 1171 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Hoxb8P09632 Gm20650-201ENSMUST00000175690 198 ntTSL 3 BASIC15.58■□□□□ 0.08
Hoxb8P09632 Prrg2-207ENSMUST00000210500 922 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.08
Hoxb8P09632 Fam162a-201ENSMUST00000004057 635 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Hoxb8P09632 Agap1-202ENSMUST00000074945 10069 ntTSL 5 BASIC15.58■□□□□ 0.08
Hoxb8P09632 Pltp-201ENSMUST00000059954 1809 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Hoxb8P09632 Zbtb14-203ENSMUST00000112676 3909 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Hoxb8P09632 Vwa8-202ENSMUST00000227255 3406 ntAPPRIS ALT2 BASIC15.58■□□□□ 0.08
Hoxb8P09632 Tex13a-201ENSMUST00000096314 1317 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Hoxb8P09632 Ankrd27-202ENSMUST00000186245 1926 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Hoxb8P09632 Serhl-201ENSMUST00000078218 1371 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Hoxb8P09632 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Hoxb8P09632 Dclk1-211ENSMUST00000199169 1499 ntTSL 2 BASIC15.58■□□□□ 0.08
Hoxb8P09632 Gdf3-201ENSMUST00000032211 2125 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Hoxb8P09632 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Hoxb8P09632 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC15.58■□□□□ 0.08
Hoxb8P09632 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Hoxb8P09632 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
Hoxb8P09632 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
Hoxb8P09632 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Hoxb8P09632 Bahd1-201ENSMUST00000036578 4594 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Hoxb8P09632 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Hoxb8P09632 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC15.57■□□□□ 0.08
Hoxb8P09632 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
Hoxb8P09632 Baz1b-201ENSMUST00000002825 6492 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Hoxb8P09632 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC15.57■□□□□ 0.08
Hoxb8P09632 Msmp-201ENSMUST00000107884 743 ntAPPRIS P1 TSL 3 BASIC15.57■□□□□ 0.08
Hoxb8P09632 Dancr-202ENSMUST00000120364 575 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Hoxb8P09632 Gm20412-201ENSMUST00000173249 633 ntTSL 5 BASIC15.57■□□□□ 0.08
Hoxb8P09632 Trp53tg5-201ENSMUST00000017864 934 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Hoxb8P09632 Gltpd2-202ENSMUST00000179000 794 ntAPPRIS ALT2 TSL 2 BASIC15.57■□□□□ 0.08
Hoxb8P09632 Gm28630-201ENSMUST00000187806 498 ntBASIC15.57■□□□□ 0.08
Hoxb8P09632 Gm37596-201ENSMUST00000193565 1021 ntAPPRIS P1 BASIC15.57■□□□□ 0.08
Hoxb8P09632 Papd7-204ENSMUST00000223344 2118 ntAPPRIS P2 TSL 3 BASIC15.57■□□□□ 0.08
Hoxb8P09632 Neurl2-201ENSMUST00000042775 1014 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Hoxb8P09632 Mlf1-202ENSMUST00000077916 1114 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Hoxb8P09632 Gm4559-201ENSMUST00000080669 600 ntAPPRIS P1 BASIC15.57■□□□□ 0.08
Hoxb8P09632 Wnk2-207ENSMUST00000159559 6584 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
Hoxb8P09632 Zfp868-202ENSMUST00000121886 2259 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Hoxb8P09632 Trnt1-201ENSMUST00000057578 2283 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Hoxb8P09632 Gm16845-201ENSMUST00000180419 1415 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Hoxb8P09632 Hnrnpa2b1-210ENSMUST00000204188 1518 ntTSL 5 BASIC15.57■□□□□ 0.08
Hoxb8P09632 Cobl-201ENSMUST00000046755 5615 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
Hoxb8P09632 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Hoxb8P09632 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Hoxb8P09632 Mrc2-202ENSMUST00000100335 5795 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Hoxb8P09632 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Hoxb8P09632 4930438A08Rik-201ENSMUST00000108834 2093 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
Hoxb8P09632 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
Hoxb8P09632 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Hoxb8P09632 Hist1h4n-201ENSMUST00000102979 430 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
Hoxb8P09632 Hist1h4m-201ENSMUST00000104941 402 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
Hoxb8P09632 Gm15593-201ENSMUST00000122085 1008 ntBASIC15.56■□□□□ 0.08
Hoxb8P09632 Gm7030-203ENSMUST00000173322 913 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Hoxb8P09632 Oaz1-203ENSMUST00000179172 744 ntTSL 5 BASIC15.56■□□□□ 0.08
Hoxb8P09632 Erdr1-204ENSMUST00000179483 688 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Hoxb8P09632 Gm29541-201ENSMUST00000191351 678 ntBASIC15.56■□□□□ 0.08
Hoxb8P09632 Gm42854-201ENSMUST00000201262 722 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Hoxb8P09632 AC135669.1-201ENSMUST00000213585 412 ntBASIC15.56■□□□□ 0.08
Hoxb8P09632 Treml1-204ENSMUST00000224001 1220 ntAPPRIS P2 BASIC15.56■□□□□ 0.08
Hoxb8P09632 Cript-201ENSMUST00000024959 1184 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Hoxb8P09632 Gm7030-201ENSMUST00000046131 913 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
Hoxb8P09632 Haus1-201ENSMUST00000048192 1004 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Hoxb8P09632 Klk5-201ENSMUST00000048444 1239 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Hoxb8P09632 Oaz1-ps-201ENSMUST00000052440 681 ntBASIC15.56■□□□□ 0.08
Hoxb8P09632 Mdm1-208ENSMUST00000219087 1318 ntTSL 2 BASIC15.56■□□□□ 0.08
Hoxb8P09632 Pdzrn3-201ENSMUST00000075994 4104 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Hoxb8P09632 Dse-201ENSMUST00000048010 4389 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Hoxb8P09632 Rnf25-201ENSMUST00000027357 1479 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
Hoxb8P09632 Zfyve19-202ENSMUST00000102519 1505 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Hoxb8P09632 Krt14-201ENSMUST00000007272 1698 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Hoxb8P09632 Arhgef40-220ENSMUST00000182909 5108 ntAPPRIS P4 TSL 5 BASIC15.56■□□□□ 0.08
Hoxb8P09632 Otub1-201ENSMUST00000025679 1713 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Hoxb8P09632 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Hoxb8P09632 Gata1-201ENSMUST00000033502 1902 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Hoxb8P09632 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Hoxb8P09632 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Hoxb8P09632 Fbxl5-207ENSMUST00000124610 2306 ntTSL 5 BASIC15.56■□□□□ 0.08
Hoxb8P09632 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC15.56■□□□□ 0.08
Hoxb8P09632 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Hoxb8P09632 Acsl3-201ENSMUST00000035779 3950 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Hoxb8P09632 Zc3h13-203ENSMUST00000227049 6144 ntAPPRIS ALT2 BASIC15.55■□□□□ 0.08
Hoxb8P09632 Tmem94-201ENSMUST00000093912 5329 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Hoxb8P09632 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Hoxb8P09632 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Hoxb8P09632 Ocrl-201ENSMUST00000001202 5253 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Hoxb8P09632 Cgn-202ENSMUST00000107273 5016 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
Hoxb8P09632 Aph1a-202ENSMUST00000056710 1601 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Hoxb8P09632 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC15.55■□□□□ 0.08
Hoxb8P09632 Gm13233-201ENSMUST00000118760 1443 ntBASIC15.55■□□□□ 0.08
Hoxb8P09632 Gm13244-201ENSMUST00000118855 1446 ntBASIC15.55■□□□□ 0.08
Hoxb8P09632 Arfgap1-214ENSMUST00000185115 1393 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
Hoxb8P09632 Atat1-203ENSMUST00000077494 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 31.8 ms