Protein–RNA interactions for Protein: P02463

Col4a1, Collagen alpha-1(IV) chain, mousemouse

Predictions only

Length 1,669 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a1P02463 Olfr455-201ENSMUST00000171307 954 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
Col4a1P02463 Tmem179-202ENSMUST00000222836 521 ntTSL 5 BASIC17.72■□□□□ 0.43
Col4a1P02463 Ube2i-201ENSMUST00000049911 1138 ntAPPRIS P1 TSL 3 BASIC17.72■□□□□ 0.43
Col4a1P02463 Mir497b-201ENSMUST00000093601 125 ntBASIC17.72■□□□□ 0.43
Col4a1P02463 Slc8b1-203ENSMUST00000111889 1624 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
Col4a1P02463 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Col4a1P02463 Pgap2-225ENSMUST00000156529 2034 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Col4a1P02463 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Col4a1P02463 Rnf4-207ENSMUST00000182709 3046 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Col4a1P02463 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Col4a1P02463 Ssr1-204ENSMUST00000225319 1610 ntBASIC17.71■□□□□ 0.43
Col4a1P02463 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Col4a1P02463 Rpl27a-203ENSMUST00000143107 1158 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Col4a1P02463 Krtap16-3-201ENSMUST00000179707 601 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
Col4a1P02463 Gm31728-201ENSMUST00000192164 435 ntTSL 3 BASIC17.71■□□□□ 0.43
Col4a1P02463 Lrp8os1-201ENSMUST00000030352 672 ntTSL 5 BASIC17.71■□□□□ 0.43
Col4a1P02463 Tmem107-201ENSMUST00000075980 779 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Col4a1P02463 AC131068.2-201ENSMUST00000226175 1453 ntBASIC17.71■□□□□ 0.43
Col4a1P02463 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
Col4a1P02463 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Col4a1P02463 Supt5-208ENSMUST00000209141 3755 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Col4a1P02463 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Col4a1P02463 Slc22a20-201ENSMUST00000041827 1897 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Col4a1P02463 D830030K20Rik-201ENSMUST00000112797 1695 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Col4a1P02463 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Col4a1P02463 Chst4-202ENSMUST00000211894 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Col4a1P02463 Slc8b1-201ENSMUST00000068326 2898 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.42
Col4a1P02463 Gm13689-201ENSMUST00000119360 685 ntBASIC17.71■□□□□ 0.42
Col4a1P02463 Gm15755-201ENSMUST00000133698 659 ntTSL 3 BASIC17.71■□□□□ 0.42
Col4a1P02463 Gm18062-201ENSMUST00000208020 547 ntBASIC17.71■□□□□ 0.42
Col4a1P02463 4930438A08Rik-202ENSMUST00000208022 918 ntTSL 5 BASIC17.71■□□□□ 0.42
Col4a1P02463 Gm18055-201ENSMUST00000208254 547 ntBASIC17.71■□□□□ 0.42
Col4a1P02463 AC166349.1-201ENSMUST00000220866 695 ntBASIC17.71■□□□□ 0.42
Col4a1P02463 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC17.7■□□□□ 0.42
Col4a1P02463 Sbds-201ENSMUST00000026387 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Col4a1P02463 Fam109b-201ENSMUST00000050349 2745 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Col4a1P02463 Trim15-201ENSMUST00000025329 1843 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
Col4a1P02463 Snrpn-202ENSMUST00000098402 2076 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
Col4a1P02463 Art3-208ENSMUST00000121096 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Col4a1P02463 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Col4a1P02463 Gm2885-201ENSMUST00000181895 1442 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Col4a1P02463 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Col4a1P02463 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Col4a1P02463 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Col4a1P02463 Cyp2ab1-205ENSMUST00000182741 1497 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
Col4a1P02463 Zscan22-203ENSMUST00000119989 2087 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Col4a1P02463 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC17.7■□□□□ 0.42
Col4a1P02463 1700030C10Rik-202ENSMUST00000186243 126 ntBASIC17.7■□□□□ 0.42
Col4a1P02463 Mrpl30-205ENSMUST00000193673 662 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
Col4a1P02463 Ins2-209ENSMUST00000210288 918 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
Col4a1P02463 AC150560.1-201ENSMUST00000227731 1187 ntBASIC17.7■□□□□ 0.42
Col4a1P02463 Nr1d1-201ENSMUST00000064941 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Col4a1P02463 Bckdha-201ENSMUST00000071329 1899 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Col4a1P02463 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Col4a1P02463 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Col4a1P02463 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Col4a1P02463 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
Col4a1P02463 Bbs5-201ENSMUST00000074963 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Col4a1P02463 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
Col4a1P02463 Nepro-201ENSMUST00000048788 2866 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Col4a1P02463 Nrsn1-204ENSMUST00000167305 1891 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Col4a1P02463 Gnpda2-201ENSMUST00000031117 1894 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
Col4a1P02463 Tepsin-203ENSMUST00000106225 2566 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
Col4a1P02463 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Col4a1P02463 R3hcc1-202ENSMUST00000121142 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Col4a1P02463 Cd209g-201ENSMUST00000130372 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Col4a1P02463 Rnf2-203ENSMUST00000186415 1106 ntTSL 5 BASIC17.69■□□□□ 0.42
Col4a1P02463 Gm43630-201ENSMUST00000201550 776 ntBASIC17.69■□□□□ 0.42
Col4a1P02463 Abhd18-205ENSMUST00000203472 588 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Col4a1P02463 Gm6007-201ENSMUST00000208170 823 ntBASIC17.69■□□□□ 0.42
Col4a1P02463 Tdrp-206ENSMUST00000210414 323 ntTSL 3 BASIC17.69■□□□□ 0.42
Col4a1P02463 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Col4a1P02463 Hadhb-201ENSMUST00000026841 2033 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Col4a1P02463 Gm15816-201ENSMUST00000141930 1688 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Col4a1P02463 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Col4a1P02463 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Col4a1P02463 Atpaf2-201ENSMUST00000108721 1813 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Col4a1P02463 AL645783.1-201ENSMUST00000221416 1832 ntBASIC17.69■□□□□ 0.42
Col4a1P02463 Zfp977-201ENSMUST00000173283 1425 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
Col4a1P02463 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Col4a1P02463 Ttll11-202ENSMUST00000112976 3077 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
Col4a1P02463 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Col4a1P02463 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
Col4a1P02463 4921513I03Rik-201ENSMUST00000056994 1534 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Col4a1P02463 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
Col4a1P02463 AC159196.2-201ENSMUST00000224082 1622 ntBASIC17.68■□□□□ 0.42
Col4a1P02463 Tbk1-201ENSMUST00000020316 3024 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Col4a1P02463 Lgi3-201ENSMUST00000047331 3174 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Col4a1P02463 Acbd5-203ENSMUST00000114526 3725 ntAPPRIS P4 TSL 1 (best) BASIC17.68■□□□□ 0.42
Col4a1P02463 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Col4a1P02463 Rph3al-203ENSMUST00000108420 695 ntTSL 3 BASIC17.68■□□□□ 0.42
Col4a1P02463 Shf-202ENSMUST00000110530 910 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
Col4a1P02463 Gm26464-201ENSMUST00000157094 305 ntBASIC17.68■□□□□ 0.42
Col4a1P02463 Gm27839-201ENSMUST00000184242 106 ntBASIC17.68■□□□□ 0.42
Col4a1P02463 AY702102-202ENSMUST00000194651 1173 ntBASIC17.68■□□□□ 0.42
Col4a1P02463 Oxt-201ENSMUST00000028764 537 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Col4a1P02463 Mrps17-201ENSMUST00000042191 832 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Col4a1P02463 Elane-201ENSMUST00000046091 984 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Col4a1P02463 Lce3a-201ENSMUST00000067318 549 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Col4a1P02463 Atp5h-202ENSMUST00000073791 659 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 36.7 ms