Protein–RNA interactions for Protein: O88551

Cldn1, Claudin-1, mousemouse

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn1O88551 Gm12264-201ENSMUST00000123949 500 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Cldn1O88551 Mettl26-204ENSMUST00000169085 324 ntTSL 5 BASIC12.57□□□□□ -0.4
Cldn1O88551 AL593843.1-201ENSMUST00000195891 145 ntBASIC12.57□□□□□ -0.4
Cldn1O88551 Armc12-201ENSMUST00000025060 1083 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Cldn1O88551 Caly-201ENSMUST00000026541 1220 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Cldn1O88551 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Cldn1O88551 Clec4g-202ENSMUST00000062037 1242 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Cldn1O88551 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Cldn1O88551 Ablim3-201ENSMUST00000049378 4532 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Cldn1O88551 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Cldn1O88551 Zfp212-201ENSMUST00000009411 2801 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Cldn1O88551 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Cldn1O88551 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC12.57□□□□□ -0.4
Cldn1O88551 Cyp2f2-201ENSMUST00000003100 1866 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Cldn1O88551 Slc8a2-202ENSMUST00000211649 5261 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Cldn1O88551 Slc23a3-201ENSMUST00000027405 2059 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Cldn1O88551 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Cldn1O88551 Gm5357-201ENSMUST00000212720 1924 ntBASIC12.56□□□□□ -0.4
Cldn1O88551 Nt5c3b-201ENSMUST00000092688 1399 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cldn1O88551 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cldn1O88551 Gm7901-201ENSMUST00000120430 1597 ntBASIC12.56□□□□□ -0.4
Cldn1O88551 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Cldn1O88551 Slfnl1-201ENSMUST00000062990 1762 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cldn1O88551 Abhd16b-201ENSMUST00000069649 1775 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
Cldn1O88551 Abi2-201ENSMUST00000052332 5768 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Cldn1O88551 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cldn1O88551 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cldn1O88551 Ccdc69-202ENSMUST00000108880 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cldn1O88551 Rpl39-201ENSMUST00000115231 612 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cldn1O88551 Gm6912-201ENSMUST00000117218 544 ntBASIC12.56□□□□□ -0.4
Cldn1O88551 Ccdc169-203ENSMUST00000118963 740 ntTSL 3 BASIC12.56□□□□□ -0.4
Cldn1O88551 Tmem128-202ENSMUST00000119047 726 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cldn1O88551 Rgs20-203ENSMUST00000119256 883 ntAPPRIS ALT2 TSL 3 BASIC12.56□□□□□ -0.4
Cldn1O88551 4932443L11Rik-201ENSMUST00000148353 414 ntTSL 5 BASIC12.56□□□□□ -0.4
Cldn1O88551 2810408I11Rik-202ENSMUST00000150749 711 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Cldn1O88551 Gm15494-202ENSMUST00000171665 451 ntTSL 2 BASIC12.56□□□□□ -0.4
Cldn1O88551 4930573H18Rik-201ENSMUST00000197696 906 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Cldn1O88551 Gm44344-201ENSMUST00000200287 129 ntBASIC12.56□□□□□ -0.4
Cldn1O88551 AI467606-202ENSMUST00000206102 832 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Cldn1O88551 Gm6218-201ENSMUST00000219812 628 ntBASIC12.56□□□□□ -0.4
Cldn1O88551 AC160980.1-201ENSMUST00000224136 970 ntBASIC12.56□□□□□ -0.4
Cldn1O88551 Ccdc169-202ENSMUST00000061099 887 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Cldn1O88551 Tmem107-201ENSMUST00000075980 779 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cldn1O88551 Gpbar1-201ENSMUST00000077985 1075 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
Cldn1O88551 Plppr2-202ENSMUST00000188468 1480 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Cldn1O88551 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cldn1O88551 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cldn1O88551 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cldn1O88551 Abcb4-201ENSMUST00000003717 4079 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cldn1O88551 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cldn1O88551 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cldn1O88551 Eps8l1-201ENSMUST00000086372 2522 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cldn1O88551 Max-202ENSMUST00000110395 1942 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cldn1O88551 Gm44616-201ENSMUST00000206417 1732 ntBASIC12.56□□□□□ -0.4
Cldn1O88551 Mdm1-208ENSMUST00000219087 1318 ntTSL 2 BASIC12.56□□□□□ -0.4
Cldn1O88551 Tsc2-221ENSMUST00000228412 5432 ntAPPRIS ALT2 BASIC12.56□□□□□ -0.4
Cldn1O88551 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cldn1O88551 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cldn1O88551 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cldn1O88551 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cldn1O88551 Tex19.2-201ENSMUST00000039146 2046 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cldn1O88551 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC12.55□□□□□ -0.4
Cldn1O88551 Ccnj-202ENSMUST00000119316 3763 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Cldn1O88551 Rexo4-202ENSMUST00000114020 2278 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cldn1O88551 Grin3a-202ENSMUST00000093859 7491 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Cldn1O88551 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cldn1O88551 1700022A21Rik-202ENSMUST00000182910 1448 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Cldn1O88551 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cldn1O88551 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Cldn1O88551 Otub1-201ENSMUST00000025679 1713 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cldn1O88551 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cldn1O88551 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cldn1O88551 Gm15321-201ENSMUST00000121290 288 ntBASIC12.55□□□□□ -0.4
Cldn1O88551 A530058N18Rik-202ENSMUST00000134129 411 ntTSL 3 BASIC12.55□□□□□ -0.4
Cldn1O88551 Gm20444-201ENSMUST00000174014 648 ntTSL 3 BASIC12.55□□□□□ -0.4
Cldn1O88551 Gm26839-201ENSMUST00000180686 842 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Cldn1O88551 Gm6745-201ENSMUST00000199216 526 ntBASIC12.55□□□□□ -0.4
Cldn1O88551 AC087891.2-201ENSMUST00000219293 658 ntTSL 5 BASIC12.55□□□□□ -0.4
Cldn1O88551 Mrpl36-201ENSMUST00000022098 923 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cldn1O88551 Olfr750-201ENSMUST00000048478 1132 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
Cldn1O88551 Cited1-201ENSMUST00000050551 901 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cldn1O88551 Myl3-201ENSMUST00000079784 937 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cldn1O88551 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cldn1O88551 Phka1-204ENSMUST00000119229 6025 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Cldn1O88551 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cldn1O88551 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cldn1O88551 Prkcz2-201ENSMUST00000206136 1756 ntBASIC12.55□□□□□ -0.4
Cldn1O88551 Ntrk2-205ENSMUST00000224402 2284 ntBASIC12.55□□□□□ -0.4
Cldn1O88551 Gm8096-201ENSMUST00000209921 1591 ntBASIC12.55□□□□□ -0.4
Cldn1O88551 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Cldn1O88551 Snx1-201ENSMUST00000034946 2073 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cldn1O88551 Clec16a-211ENSMUST00000155633 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cldn1O88551 Fzd6-202ENSMUST00000179165 4325 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cldn1O88551 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cldn1O88551 Psmd5-201ENSMUST00000028225 4397 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cldn1O88551 Leng8-201ENSMUST00000037472 5105 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cldn1O88551 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cldn1O88551 Rplp0-201ENSMUST00000086519 1358 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cldn1O88551 Ttll5-204ENSMUST00000110220 2655 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Cldn1O88551 Dkk1-201ENSMUST00000025803 2427 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 26.1 ms