Protein–RNA interactions for Protein: O88545

Cops6, COP9 signalosome complex subunit 6, mousemouse

Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cops6O88545 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Cops6O88545 Gm16279-201ENSMUST00000149452 2945 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Cops6O88545 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Cops6O88545 Nme1-202ENSMUST00000107844 452 ntTSL 3 BASIC17.81■□□□□ 0.44
Cops6O88545 1700121C08Rik-201ENSMUST00000137546 677 ntTSL 3 BASIC17.81■□□□□ 0.44
Cops6O88545 Gm42612-201ENSMUST00000197986 623 ntBASIC17.81■□□□□ 0.44
Cops6O88545 Gm43170-201ENSMUST00000199827 612 ntBASIC17.81■□□□□ 0.44
Cops6O88545 Mt1-201ENSMUST00000034215 549 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Cops6O88545 Hist1h3f-201ENSMUST00000075558 1261 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
Cops6O88545 Zfp639-205ENSMUST00000193287 2211 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Cops6O88545 Nfkbia-201ENSMUST00000021413 1578 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Cops6O88545 Mex3c-201ENSMUST00000091852 3738 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Cops6O88545 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Cops6O88545 Sp2-203ENSMUST00000107624 3055 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Cops6O88545 Mapk8ip3-201ENSMUST00000088345 5543 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
Cops6O88545 Nupr1l-201ENSMUST00000178355 1827 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
Cops6O88545 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
Cops6O88545 Ppia-206ENSMUST00000213200 1450 ntTSL 5 BASIC17.81■□□□□ 0.44
Cops6O88545 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Cops6O88545 CN725425-202ENSMUST00000190436 2041 ntAPPRIS P5 TSL 5 BASIC17.81■□□□□ 0.44
Cops6O88545 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
Cops6O88545 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Cops6O88545 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Cops6O88545 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
Cops6O88545 Plin5-201ENSMUST00000019808 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Cops6O88545 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Cops6O88545 Gm29154-231ENSMUST00000215120 1367 ntTSL 5 BASIC17.8■□□□□ 0.44
Cops6O88545 Gm9252-201ENSMUST00000172364 1602 ntBASIC17.8■□□□□ 0.44
Cops6O88545 Mcm9-201ENSMUST00000075540 4882 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
Cops6O88545 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
Cops6O88545 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
Cops6O88545 Rhoj-202ENSMUST00000118602 2396 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Cops6O88545 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Cops6O88545 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Cops6O88545 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Cops6O88545 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Cops6O88545 Rdm1-201ENSMUST00000010506 1124 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Cops6O88545 Gm14928-201ENSMUST00000120198 477 ntBASIC17.8■□□□□ 0.44
Cops6O88545 Gm7820-201ENSMUST00000121012 1052 ntBASIC17.8■□□□□ 0.44
Cops6O88545 AI413582-204ENSMUST00000154473 836 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Cops6O88545 Rab40c-203ENSMUST00000164982 789 ntTSL 5 BASIC17.8■□□□□ 0.44
Cops6O88545 Gm36979-201ENSMUST00000193616 539 ntTSL 5 BASIC17.8■□□□□ 0.44
Cops6O88545 Gm6916-202ENSMUST00000205523 195 ntBASIC17.8■□□□□ 0.44
Cops6O88545 Coa6-202ENSMUST00000211868 564 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Cops6O88545 5430427M07Rik-202ENSMUST00000221524 1023 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Cops6O88545 Cnpy2-201ENSMUST00000026446 763 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
Cops6O88545 Gm9949-201ENSMUST00000067743 962 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Cops6O88545 Fbxo27-202ENSMUST00000108280 2031 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Cops6O88545 Abl1-201ENSMUST00000028190 5794 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
Cops6O88545 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Cops6O88545 Hnrnpa3-202ENSMUST00000111961 1734 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Cops6O88545 Ccnh-204ENSMUST00000164127 1718 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Cops6O88545 Pdk1-201ENSMUST00000006669 5185 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Cops6O88545 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
Cops6O88545 Ptprs-211ENSMUST00000223859 5588 ntBASIC17.8■□□□□ 0.44
Cops6O88545 Ecsit-201ENSMUST00000098937 1673 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Cops6O88545 Klf4-201ENSMUST00000107619 3029 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Cops6O88545 Ece2-204ENSMUST00000133344 3042 ntAPPRIS ALT1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Cops6O88545 Gm36839-201ENSMUST00000222088 2093 ntTSL 5 BASIC17.79■□□□□ 0.44
Cops6O88545 Bscl2-201ENSMUST00000086058 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Cops6O88545 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Cops6O88545 Hadh-201ENSMUST00000029610 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Cops6O88545 Mospd3-202ENSMUST00000111007 1318 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Cops6O88545 Gm5763-201ENSMUST00000155951 1530 ntBASIC17.79■□□□□ 0.44
Cops6O88545 Tex44-201ENSMUST00000046004 1724 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
Cops6O88545 Gm29682-201ENSMUST00000210896 1251 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Cops6O88545 Cplx3-202ENSMUST00000215487 594 ntTSL 3 BASIC17.79■□□□□ 0.44
Cops6O88545 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
Cops6O88545 Uts2-201ENSMUST00000030803 538 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Cops6O88545 Srd5a2-201ENSMUST00000043458 854 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Cops6O88545 Prtn3-201ENSMUST00000006679 1025 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Cops6O88545 Dhrs1-201ENSMUST00000002403 1477 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Cops6O88545 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC17.79■□□□□ 0.44
Cops6O88545 Rxrb-202ENSMUST00000116612 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Cops6O88545 Zbed5-201ENSMUST00000041466 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Cops6O88545 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Cops6O88545 Abcf2-201ENSMUST00000030795 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Cops6O88545 Rwdd2a-201ENSMUST00000034988 1355 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Cops6O88545 Eftud2-202ENSMUST00000107060 3339 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Cops6O88545 Skida1-201ENSMUST00000066885 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Cops6O88545 Gm13074-201ENSMUST00000124848 2735 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Cops6O88545 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Cops6O88545 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
Cops6O88545 4930438A08Rik-201ENSMUST00000108834 2093 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
Cops6O88545 Gm10110-201ENSMUST00000081204 1891 ntTSL 5 BASIC17.78■□□□□ 0.44
Cops6O88545 Cyp2a5-201ENSMUST00000005685 2013 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Cops6O88545 B230359F08Rik-201ENSMUST00000103671 426 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
Cops6O88545 Gm14042-201ENSMUST00000120139 833 ntBASIC17.78■□□□□ 0.44
Cops6O88545 Tmem262-201ENSMUST00000143303 545 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Cops6O88545 Gm29585-201ENSMUST00000185270 514 ntTSL 5 BASIC17.78■□□□□ 0.44
Cops6O88545 Agrp-202ENSMUST00000194091 734 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
Cops6O88545 Cxcl17-202ENSMUST00000200880 760 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Cops6O88545 Gm9794-201ENSMUST00000202370 423 ntBASIC17.78■□□□□ 0.44
Cops6O88545 1700028J19Rik-203ENSMUST00000206686 1166 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Cops6O88545 Tgif2-ps2-201ENSMUST00000061746 711 ntBASIC17.78■□□□□ 0.44
Cops6O88545 Cxcl17-201ENSMUST00000074040 761 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
Cops6O88545 Crat-202ENSMUST00000102854 2160 ntTSL 5 BASIC17.78■□□□□ 0.44
Cops6O88545 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Cops6O88545 Trim68-205ENSMUST00000210855 2301 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Cops6O88545 Nyx-201ENSMUST00000050434 5183 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 24.9 ms