Protein–RNA interactions for Protein: O88393

Tgfbr3, Transforming growth factor beta receptor type 3, mousemouse

Predictions only

Length 850 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tgfbr3O88393 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Tgfbr3O88393 Ankrd44-201ENSMUST00000044359 6192 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
Tgfbr3O88393 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Tgfbr3O88393 Rubcn-201ENSMUST00000040986 5257 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
Tgfbr3O88393 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Tgfbr3O88393 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Tgfbr3O88393 Kmt5c-202ENSMUST00000108582 2774 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Tgfbr3O88393 Ptprt-202ENSMUST00000109442 7719 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
Tgfbr3O88393 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Tgfbr3O88393 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Tgfbr3O88393 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Tgfbr3O88393 Ctnna2-204ENSMUST00000160894 4162 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Tgfbr3O88393 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Tgfbr3O88393 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC13.87□□□□□ -0.19
Tgfbr3O88393 Cyp4f18-201ENSMUST00000003574 1702 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Tgfbr3O88393 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC13.87□□□□□ -0.19
Tgfbr3O88393 Acbd5-203ENSMUST00000114526 3725 ntAPPRIS P4 TSL 1 (best) BASIC13.87□□□□□ -0.19
Tgfbr3O88393 Por-202ENSMUST00000122113 2606 ntTSL 2 BASIC13.87□□□□□ -0.19
Tgfbr3O88393 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Tgfbr3O88393 C130074G19Rik-201ENSMUST00000048308 3035 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Tgfbr3O88393 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Tgfbr3O88393 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Tgfbr3O88393 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Tgfbr3O88393 Fcnb-202ENSMUST00000117486 873 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Tgfbr3O88393 Gm11478-201ENSMUST00000117851 599 ntBASIC13.87□□□□□ -0.19
Tgfbr3O88393 Gm16000-201ENSMUST00000146657 447 ntTSL 2 BASIC13.87□□□□□ -0.19
Tgfbr3O88393 Nfya-203ENSMUST00000159063 1255 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Tgfbr3O88393 Gsg1l2-202ENSMUST00000181566 1158 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
Tgfbr3O88393 Gm37667-201ENSMUST00000193103 752 ntTSL 5 BASIC13.87□□□□□ -0.19
Tgfbr3O88393 Inpp4a-213ENSMUST00000193774 1243 ntTSL 5 BASIC13.87□□□□□ -0.19
Tgfbr3O88393 Cxcl17-202ENSMUST00000200880 760 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Tgfbr3O88393 Tbc1d17-209ENSMUST00000207293 692 ntTSL 3 BASIC13.87□□□□□ -0.19
Tgfbr3O88393 Gm45668-201ENSMUST00000211271 493 ntBASIC13.87□□□□□ -0.19
Tgfbr3O88393 Ppcdc-205ENSMUST00000214144 724 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Tgfbr3O88393 Gm9182-201ENSMUST00000217829 639 ntBASIC13.87□□□□□ -0.19
Tgfbr3O88393 Gm15823-201ENSMUST00000064305 670 ntBASIC13.87□□□□□ -0.19
Tgfbr3O88393 Rpl13a-ps1-201ENSMUST00000071866 612 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
Tgfbr3O88393 Cxcl17-201ENSMUST00000074040 761 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
Tgfbr3O88393 Hist1h3f-201ENSMUST00000075558 1261 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
Tgfbr3O88393 Mir125a-201ENSMUST00000083545 68 ntBASIC13.87□□□□□ -0.19
Tgfbr3O88393 Adcy3-207ENSMUST00000152065 4728 ntAPPRIS ALT1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Tgfbr3O88393 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Tgfbr3O88393 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Tgfbr3O88393 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Tgfbr3O88393 Mbp-204ENSMUST00000080658 2063 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Tgfbr3O88393 Gm21981-201ENSMUST00000143789 2721 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
Tgfbr3O88393 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC13.87□□□□□ -0.19
Tgfbr3O88393 Btaf1-201ENSMUST00000099494 7204 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Tgfbr3O88393 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Tgfbr3O88393 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
Tgfbr3O88393 Gm9115-201ENSMUST00000120192 1348 ntBASIC13.87□□□□□ -0.19
Tgfbr3O88393 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC13.87□□□□□ -0.19
Tgfbr3O88393 Gpd2-202ENSMUST00000112618 5759 ntTSL 5 BASIC13.86□□□□□ -0.19
Tgfbr3O88393 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Tgfbr3O88393 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
Tgfbr3O88393 Cblb-201ENSMUST00000114471 6648 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Tgfbr3O88393 Map3k12-207ENSMUST00000169377 4210 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Tgfbr3O88393 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Tgfbr3O88393 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Tgfbr3O88393 Atg4d-201ENSMUST00000065005 5951 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Tgfbr3O88393 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Tgfbr3O88393 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Tgfbr3O88393 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Tgfbr3O88393 Ngf-202ENSMUST00000106925 1187 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Tgfbr3O88393 Snhg17-201ENSMUST00000133449 933 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Tgfbr3O88393 Gm11899-201ENSMUST00000142373 745 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Tgfbr3O88393 U2af1l4-216ENSMUST00000166510 835 ntTSL 5 BASIC13.86□□□□□ -0.19
Tgfbr3O88393 Gm15494-202ENSMUST00000171665 451 ntTSL 2 BASIC13.86□□□□□ -0.19
Tgfbr3O88393 Gm21854-201ENSMUST00000179901 471 ntBASIC13.86□□□□□ -0.19
Tgfbr3O88393 Gm10766-202ENSMUST00000194123 606 ntBASIC13.86□□□□□ -0.19
Tgfbr3O88393 Gm37917-201ENSMUST00000194711 392 ntBASIC13.86□□□□□ -0.19
Tgfbr3O88393 4930500L23Rik-201ENSMUST00000198000 747 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Tgfbr3O88393 Isca2-201ENSMUST00000021667 883 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Tgfbr3O88393 AC156016.3-201ENSMUST00000228623 344 ntBASIC13.86□□□□□ -0.19
Tgfbr3O88393 Lrif1-202ENSMUST00000098751 929 ntTSL 2 BASIC13.86□□□□□ -0.19
Tgfbr3O88393 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC13.86□□□□□ -0.19
Tgfbr3O88393 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
Tgfbr3O88393 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Tgfbr3O88393 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Tgfbr3O88393 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Tgfbr3O88393 Gm44443-201ENSMUST00000204396 5633 ntBASIC13.86□□□□□ -0.19
Tgfbr3O88393 Myl12a-206ENSMUST00000148960 1937 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Tgfbr3O88393 Il18r1-203ENSMUST00000167723 1919 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Tgfbr3O88393 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Tgfbr3O88393 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Tgfbr3O88393 Wnk2-207ENSMUST00000159559 6584 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
Tgfbr3O88393 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Tgfbr3O88393 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Tgfbr3O88393 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
Tgfbr3O88393 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Tgfbr3O88393 Cyp27a1-201ENSMUST00000027356 1892 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Tgfbr3O88393 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Tgfbr3O88393 Spaca3-202ENSMUST00000103223 947 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Tgfbr3O88393 Gm7820-201ENSMUST00000121012 1052 ntBASIC13.85□□□□□ -0.19
Tgfbr3O88393 Gm9726-201ENSMUST00000180321 678 ntBASIC13.85□□□□□ -0.19
Tgfbr3O88393 Rpp21-201ENSMUST00000025319 729 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Tgfbr3O88393 Nudt17-201ENSMUST00000029742 1039 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Tgfbr3O88393 Gm9797-201ENSMUST00000052902 613 ntBASIC13.85□□□□□ -0.19
Tgfbr3O88393 Uqcr10-201ENSMUST00000058407 434 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Tgfbr3O88393 Pdlim7-202ENSMUST00000069929 899 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 78.5 ms