Protein–RNA interactions for Protein: O88384

Vti1b, Vesicle transport through interaction with t-SNAREs homolog 1B, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vti1bO88384 AC151836.1-202ENSMUST00000226259 753 ntBASIC13.98□□□□□ -0.17
Vti1bO88384 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Vti1bO88384 Bhlha9-201ENSMUST00000056184 1207 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
Vti1bO88384 Selenov-201ENSMUST00000056589 1267 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Vti1bO88384 Gm15590-201ENSMUST00000078419 552 ntBASIC13.98□□□□□ -0.17
Vti1bO88384 Brix1-201ENSMUST00000022855 2664 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Vti1bO88384 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Vti1bO88384 Rbbp8nl-201ENSMUST00000038529 2319 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Vti1bO88384 Col1a2-201ENSMUST00000031668 5348 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Vti1bO88384 Abhd16b-201ENSMUST00000069649 1775 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
Vti1bO88384 Plod2-201ENSMUST00000070522 3649 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
Vti1bO88384 Tbx15-201ENSMUST00000029462 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Vti1bO88384 Gm29683-203ENSMUST00000209071 2488 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Vti1bO88384 Gspt2-201ENSMUST00000096368 2491 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
Vti1bO88384 Olfml2a-201ENSMUST00000057279 5579 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Vti1bO88384 Eef2kmt-201ENSMUST00000064635 2170 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Vti1bO88384 Atp6v0d1-201ENSMUST00000013304 1629 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Vti1bO88384 Ubc-203ENSMUST00000156249 2581 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
Vti1bO88384 Gm9856-201ENSMUST00000217077 2578 ntBASIC13.97□□□□□ -0.17
Vti1bO88384 Mbp-203ENSMUST00000075372 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Vti1bO88384 Vwa2-201ENSMUST00000026068 4049 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Vti1bO88384 Slc22a15-207ENSMUST00000190824 3010 ntTSL 5 BASIC13.97□□□□□ -0.17
Vti1bO88384 Gak-201ENSMUST00000046603 4453 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Vti1bO88384 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Vti1bO88384 Klhl21-201ENSMUST00000097773 3986 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Vti1bO88384 Bet1l-201ENSMUST00000026557 2268 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Vti1bO88384 Fbrs-202ENSMUST00000205432 4166 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
Vti1bO88384 Rplp2-203ENSMUST00000106004 421 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
Vti1bO88384 Gm6184-201ENSMUST00000120403 1261 ntBASIC13.97□□□□□ -0.17
Vti1bO88384 Enkd1-201ENSMUST00000013299 1275 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Vti1bO88384 Gm15677-201ENSMUST00000152302 766 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Vti1bO88384 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Vti1bO88384 Gm23547-201ENSMUST00000158210 271 ntBASIC13.97□□□□□ -0.17
Vti1bO88384 Washc3-202ENSMUST00000171151 837 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Vti1bO88384 Gm20680-201ENSMUST00000176881 789 ntTSL 5 BASIC13.97□□□□□ -0.17
Vti1bO88384 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC13.97□□□□□ -0.17
Vti1bO88384 AC138767.1-201ENSMUST00000222661 415 ntBASIC13.97□□□□□ -0.17
Vti1bO88384 AC147366.1-201ENSMUST00000227671 852 ntBASIC13.97□□□□□ -0.17
Vti1bO88384 Ly6k-201ENSMUST00000060301 791 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Vti1bO88384 Ptk2-202ENSMUST00000170939 3598 ntTSL 2 BASIC13.97□□□□□ -0.17
Vti1bO88384 Ror2-201ENSMUST00000021918 3985 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Vti1bO88384 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Vti1bO88384 Fam57b-203ENSMUST00000205324 1915 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Vti1bO88384 Fut11-201ENSMUST00000048016 4163 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Vti1bO88384 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Vti1bO88384 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
Vti1bO88384 Pcsk6-202ENSMUST00000098391 4207 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Vti1bO88384 Tle1-204ENSMUST00000102848 3660 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Vti1bO88384 Camta2-203ENSMUST00000108544 4632 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Vti1bO88384 Hsd3b7-202ENSMUST00000106271 1713 ntTSL 5 BASIC13.96□□□□□ -0.17
Vti1bO88384 Ptprk-201ENSMUST00000166468 6177 ntAPPRIS P2 TSL 2 BASIC13.96□□□□□ -0.17
Vti1bO88384 Ism2-202ENSMUST00000125733 2526 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
Vti1bO88384 Fbxo34-203ENSMUST00000163324 3132 ntAPPRIS ALT2 TSL 2 BASIC13.96□□□□□ -0.17
Vti1bO88384 Mfrp-202ENSMUST00000161381 4254 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Vti1bO88384 Mtrr-209ENSMUST00000223398 3861 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Vti1bO88384 Ablim1-209ENSMUST00000111546 2267 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
Vti1bO88384 Lpar2-202ENSMUST00000164890 5800 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Vti1bO88384 AC154527.4-201ENSMUST00000224364 1667 ntBASIC13.96□□□□□ -0.17
Vti1bO88384 Gm11453-201ENSMUST00000117318 1007 ntBASIC13.96□□□□□ -0.17
Vti1bO88384 Wdr61-203ENSMUST00000121204 1290 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Vti1bO88384 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC13.96□□□□□ -0.17
Vti1bO88384 Gm11750-201ENSMUST00000146016 583 ntTSL 5 BASIC13.96□□□□□ -0.17
Vti1bO88384 Gm15598-201ENSMUST00000156965 763 ntTSL 5 BASIC13.96□□□□□ -0.17
Vti1bO88384 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Vti1bO88384 1700039E22Rik-201ENSMUST00000174082 770 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Vti1bO88384 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC13.96□□□□□ -0.17
Vti1bO88384 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC13.96□□□□□ -0.17
Vti1bO88384 Gm45167-201ENSMUST00000208007 322 ntBASIC13.96□□□□□ -0.17
Vti1bO88384 Pih1d1-206ENSMUST00000210139 1077 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Vti1bO88384 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Vti1bO88384 Sesn1-201ENSMUST00000041438 2600 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
Vti1bO88384 Smo-201ENSMUST00000001812 3779 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Vti1bO88384 Adam22-207ENSMUST00000115388 9161 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
Vti1bO88384 Pomt2-201ENSMUST00000037788 5064 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Vti1bO88384 Cacna1g-203ENSMUST00000103166 8104 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
Vti1bO88384 Zfp553-202ENSMUST00000106312 3342 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Vti1bO88384 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
Vti1bO88384 Mdfic-203ENSMUST00000125326 3635 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
Vti1bO88384 Mdfic-201ENSMUST00000101663 3431 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Vti1bO88384 Mdfic-206ENSMUST00000189359 3435 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Vti1bO88384 Mdfic-207ENSMUST00000190255 3431 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
Vti1bO88384 Atp2a2-202ENSMUST00000177974 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Vti1bO88384 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.18
Vti1bO88384 Trmt10c-201ENSMUST00000059052 3002 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Vti1bO88384 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC13.95□□□□□ -0.18
Vti1bO88384 Zfp628-201ENSMUST00000116354 3523 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Vti1bO88384 Emilin3-201ENSMUST00000057169 3547 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
Vti1bO88384 4930438A08Rik-201ENSMUST00000108834 2093 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
Vti1bO88384 Zmym4-201ENSMUST00000106108 7102 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Vti1bO88384 Trim27-201ENSMUST00000021761 4204 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Vti1bO88384 Zfp568-203ENSMUST00000148442 4005 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
Vti1bO88384 Mroh1-202ENSMUST00000096385 5268 ntAPPRIS P4 TSL 1 (best) BASIC13.95□□□□□ -0.18
Vti1bO88384 D6Ertd527e-204ENSMUST00000204927 2218 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
Vti1bO88384 Epha1-201ENSMUST00000073387 3273 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Vti1bO88384 Esyt1-201ENSMUST00000026427 3981 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Vti1bO88384 Gm26546-201ENSMUST00000181000 4276 ntTSL 5 BASIC13.95□□□□□ -0.18
Vti1bO88384 Cry2-202ENSMUST00000111278 2160 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Vti1bO88384 Reck-201ENSMUST00000030198 4433 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Vti1bO88384 Bbs7-203ENSMUST00000108156 2687 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Vti1bO88384 Lrp10-201ENSMUST00000022782 4228 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 39.4 ms