Protein–RNA interactions for Protein: O88322

Nid2, Nidogen-2, mousemouse

Predictions only

Length 1,403 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nid2O88322 Gm9728-201ENSMUST00000200197 1055 ntBASIC18.8■□□□□ 0.6
Nid2O88322 Sit1-201ENSMUST00000030180 1228 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Nid2O88322 Tmem54-202ENSMUST00000030577 988 ntAPPRIS ALT2 TSL 3 BASIC18.8■□□□□ 0.6
Nid2O88322 Gm10570-201ENSMUST00000097865 513 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
Nid2O88322 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
Nid2O88322 Car7-202ENSMUST00000159416 1943 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Nid2O88322 4833422C13Rik-201ENSMUST00000099331 2083 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Nid2O88322 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
Nid2O88322 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Nid2O88322 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Nid2O88322 Gm11978-202ENSMUST00000127510 1303 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Nid2O88322 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Nid2O88322 Eif2a-201ENSMUST00000029387 2299 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Nid2O88322 Orc6-202ENSMUST00000170141 1466 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Nid2O88322 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Nid2O88322 Eml3-202ENSMUST00000224272 2978 ntAPPRIS ALT2 BASIC18.79■□□□□ 0.6
Nid2O88322 Art3-208ENSMUST00000121096 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Nid2O88322 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Nid2O88322 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
Nid2O88322 Trem1-202ENSMUST00000113251 2077 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Nid2O88322 Pdia2-202ENSMUST00000120333 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Nid2O88322 Leng8-202ENSMUST00000117274 874 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Nid2O88322 Car15-201ENSMUST00000118960 1283 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Nid2O88322 Gm11524-201ENSMUST00000119349 807 ntBASIC18.79■□□□□ 0.6
Nid2O88322 Trav4d-2-201ENSMUST00000120914 335 ntBASIC18.79■□□□□ 0.6
Nid2O88322 Gm15376-201ENSMUST00000122258 783 ntBASIC18.79■□□□□ 0.6
Nid2O88322 Smim5-201ENSMUST00000131566 700 ntTSL 2 BASIC18.79■□□□□ 0.6
Nid2O88322 Gm11684-201ENSMUST00000144975 757 ntTSL 5 BASIC18.79■□□□□ 0.6
Nid2O88322 Gm8652-201ENSMUST00000181363 964 ntBASIC18.79■□□□□ 0.6
Nid2O88322 Gm18905-201ENSMUST00000205454 928 ntBASIC18.79■□□□□ 0.6
Nid2O88322 Gm44756-201ENSMUST00000206172 1069 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Nid2O88322 Gm7561-201ENSMUST00000211203 886 ntBASIC18.79■□□□□ 0.6
Nid2O88322 Gm33460-201ENSMUST00000212286 536 ntTSL 5 BASIC18.79■□□□□ 0.6
Nid2O88322 Lyzl6-201ENSMUST00000021328 900 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Nid2O88322 Mal-201ENSMUST00000028853 486 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Nid2O88322 Bpifa6-201ENSMUST00000109753 1572 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Nid2O88322 Bbs10-201ENSMUST00000040454 2744 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
Nid2O88322 Gm13034-201ENSMUST00000121342 3177 ntBASIC18.79■□□□□ 0.6
Nid2O88322 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Nid2O88322 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Nid2O88322 Aqp8-201ENSMUST00000033023 1487 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Nid2O88322 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Nid2O88322 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Nid2O88322 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Nid2O88322 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Nid2O88322 D130052B06Rik-201ENSMUST00000101371 2295 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Nid2O88322 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Nid2O88322 Opn5-201ENSMUST00000068355 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Nid2O88322 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Nid2O88322 Spidr-201ENSMUST00000040248 3279 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Nid2O88322 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Nid2O88322 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Nid2O88322 Tbx6-201ENSMUST00000094037 1727 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Nid2O88322 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
Nid2O88322 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
Nid2O88322 Ppm1h-208ENSMUST00000162969 811 ntTSL 3 BASIC18.78■□□□□ 0.6
Nid2O88322 Gm29417-201ENSMUST00000188160 571 ntTSL 5 BASIC18.78■□□□□ 0.6
Nid2O88322 Gm29127-201ENSMUST00000188304 517 ntBASIC18.78■□□□□ 0.6
Nid2O88322 AC122459.1-201ENSMUST00000228373 885 ntBASIC18.78■□□□□ 0.6
Nid2O88322 4921530L21Rik-201ENSMUST00000045892 1161 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Nid2O88322 Gm8399-201ENSMUST00000082300 1117 ntBASIC18.78■□□□□ 0.6
Nid2O88322 Ifitm10-202ENSMUST00000084412 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Nid2O88322 Pigb-207ENSMUST00000184389 2079 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Nid2O88322 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Nid2O88322 Itm2b-201ENSMUST00000022704 1796 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Nid2O88322 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Nid2O88322 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Nid2O88322 B3gntl1-201ENSMUST00000062654 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Nid2O88322 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC18.78■□□□□ 0.6
Nid2O88322 Mpp4-201ENSMUST00000066374 2344 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
Nid2O88322 Mpp4-202ENSMUST00000078874 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Nid2O88322 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Nid2O88322 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Nid2O88322 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Nid2O88322 Tifa-203ENSMUST00000164447 1538 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Nid2O88322 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Nid2O88322 Gm15557-201ENSMUST00000109629 1380 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
Nid2O88322 Nat3-201ENSMUST00000070514 1395 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Nid2O88322 Vav1-204ENSMUST00000169220 2810 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Nid2O88322 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Nid2O88322 Apoa5-201ENSMUST00000034584 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Nid2O88322 Zfp57-202ENSMUST00000089968 1991 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Nid2O88322 Dnase1l2-202ENSMUST00000119932 1629 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Nid2O88322 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC18.77■□□□□ 0.6
Nid2O88322 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Nid2O88322 Pyy-204ENSMUST00000177304 551 ntAPPRIS ALT2 TSL 2 BASIC18.77■□□□□ 0.6
Nid2O88322 Gm37714-201ENSMUST00000194742 342 ntBASIC18.77■□□□□ 0.6
Nid2O88322 Aym1-201ENSMUST00000066573 528 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
Nid2O88322 Atp5h-202ENSMUST00000073791 659 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
Nid2O88322 Gm6091-201ENSMUST00000098307 165 ntBASIC18.77■□□□□ 0.6
Nid2O88322 Ccdc33-202ENSMUST00000098681 1093 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Nid2O88322 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Nid2O88322 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Nid2O88322 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Nid2O88322 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Nid2O88322 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.59
Nid2O88322 Gcnt2-205ENSMUST00000225759 1366 ntAPPRIS ALT2 BASIC18.77■□□□□ 0.59
Nid2O88322 Gm9954-202ENSMUST00000198686 4725 ntBASIC18.77■□□□□ 0.59
Nid2O88322 Zbtb14-201ENSMUST00000062369 3625 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Nid2O88322 Arhgap40-203ENSMUST00000165398 2028 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 41.9 ms