Protein–RNA interactions for Protein: O55017

Cacna1b, Voltage-dependent N-type calcium channel subunit alpha-1B, mousemouse

Predictions only

Length 2,327 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1bO55017 Abhd18-205ENSMUST00000203472 588 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Cacna1bO55017 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC14.09□□□□□ -0.15
Cacna1bO55017 Slc7a15-204ENSMUST00000165657 1467 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Cacna1bO55017 Slc7a15-202ENSMUST00000095863 1467 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cacna1bO55017 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cacna1bO55017 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cacna1bO55017 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cacna1bO55017 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cacna1bO55017 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cacna1bO55017 Adrb3-203ENSMUST00000121838 1864 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cacna1bO55017 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cacna1bO55017 Gm21981-201ENSMUST00000143789 2721 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Cacna1bO55017 Mettl22-201ENSMUST00000046470 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cacna1bO55017 Exo5-204ENSMUST00000177880 1969 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
Cacna1bO55017 Exo5-201ENSMUST00000030375 1996 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cacna1bO55017 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cacna1bO55017 BC001981-202ENSMUST00000191393 1545 ntBASIC14.09□□□□□ -0.15
Cacna1bO55017 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cacna1bO55017 Itga3-203ENSMUST00000120375 4697 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cacna1bO55017 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cacna1bO55017 Cndp2-202ENSMUST00000168419 2088 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cacna1bO55017 Kcnq2-208ENSMUST00000103051 4200 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Cacna1bO55017 Gstt1-201ENSMUST00000001713 1037 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cacna1bO55017 Spag7-201ENSMUST00000018431 1159 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cacna1bO55017 Mrpl30-205ENSMUST00000193673 662 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
Cacna1bO55017 Selenov-201ENSMUST00000056589 1267 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cacna1bO55017 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cacna1bO55017 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cacna1bO55017 Zfp36l2-201ENSMUST00000060366 3530 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cacna1bO55017 Gm10371-201ENSMUST00000127429 1411 ntTSL 2 BASIC14.09□□□□□ -0.15
Cacna1bO55017 4930473A02Rik-202ENSMUST00000136793 1409 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Cacna1bO55017 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cacna1bO55017 Sirt5-203ENSMUST00000220576 1579 ntTSL 5 BASIC14.09□□□□□ -0.15
Cacna1bO55017 Mib1-201ENSMUST00000052838 10231 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cacna1bO55017 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Cacna1bO55017 Sesn3-207ENSMUST00000209187 1700 ntTSL 5 BASIC14.09□□□□□ -0.15
Cacna1bO55017 Pmvk-202ENSMUST00000107410 652 ntTSL 5 BASIC14.08□□□□□ -0.16
Cacna1bO55017 Zfp125-202ENSMUST00000144811 704 ntTSL 5 BASIC14.08□□□□□ -0.16
Cacna1bO55017 Gm33320-201ENSMUST00000192232 530 ntBASIC14.08□□□□□ -0.16
Cacna1bO55017 Apoa5-203ENSMUST00000213878 727 ntTSL 3 BASIC14.08□□□□□ -0.16
Cacna1bO55017 AC238811.3-201ENSMUST00000225422 709 ntBASIC14.08□□□□□ -0.16
Cacna1bO55017 Upk3bl-201ENSMUST00000006303 1045 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cacna1bO55017 Nfe2-207ENSMUST00000134554 1761 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
Cacna1bO55017 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC14.08□□□□□ -0.16
Cacna1bO55017 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cacna1bO55017 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cacna1bO55017 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC14.08□□□□□ -0.16
Cacna1bO55017 Anks1-203ENSMUST00000114842 5610 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cacna1bO55017 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC14.08□□□□□ -0.16
Cacna1bO55017 Gm29154-231ENSMUST00000215120 1367 ntTSL 5 BASIC14.08□□□□□ -0.16
Cacna1bO55017 Gm13589-201ENSMUST00000146404 1675 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Cacna1bO55017 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
Cacna1bO55017 Plin5-201ENSMUST00000019808 1986 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cacna1bO55017 Slc25a32-201ENSMUST00000022908 5905 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cacna1bO55017 Txndc11-203ENSMUST00000118679 3523 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Cacna1bO55017 Arpc4-203ENSMUST00000203578 1323 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Cacna1bO55017 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC14.08□□□□□ -0.16
Cacna1bO55017 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Cacna1bO55017 Gm27731-201ENSMUST00000185192 107 ntBASIC14.08□□□□□ -0.16
Cacna1bO55017 Nsmaf-201ENSMUST00000029910 3507 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cacna1bO55017 Uts2-201ENSMUST00000030803 538 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cacna1bO55017 Lce3a-201ENSMUST00000067318 549 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cacna1bO55017 S100a7a-201ENSMUST00000079286 1280 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cacna1bO55017 S100a16-201ENSMUST00000098910 1123 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cacna1bO55017 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cacna1bO55017 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
Cacna1bO55017 Bcl2l14-206ENSMUST00000163589 2131 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Cacna1bO55017 Cdk5r1-201ENSMUST00000053413 4162 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
Cacna1bO55017 Gm42853-201ENSMUST00000201273 1387 ntBASIC14.08□□□□□ -0.16
Cacna1bO55017 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cacna1bO55017 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cacna1bO55017 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Cacna1bO55017 Clcc1-201ENSMUST00000029483 2224 ntAPPRIS P3 TSL 5 BASIC14.08□□□□□ -0.16
Cacna1bO55017 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cacna1bO55017 Wscd2-201ENSMUST00000094452 4302 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cacna1bO55017 Zbed4-201ENSMUST00000041297 5425 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cacna1bO55017 Rnf44-201ENSMUST00000037422 3734 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Cacna1bO55017 Kcnk6-201ENSMUST00000085818 4084 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cacna1bO55017 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cacna1bO55017 Papd5-201ENSMUST00000066748 4489 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Cacna1bO55017 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Cacna1bO55017 Piezo1-209ENSMUST00000156333 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cacna1bO55017 Piezo1-201ENSMUST00000067252 8216 ntAPPRIS P2 TSL 5 BASIC14.07□□□□□ -0.16
Cacna1bO55017 Arfrp1-202ENSMUST00000108808 1133 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cacna1bO55017 Gm12057-202ENSMUST00000189990 882 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Cacna1bO55017 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Cacna1bO55017 Ralgapa2-211ENSMUST00000228797 8245 ntAPPRIS ALT2 BASIC14.07□□□□□ -0.16
Cacna1bO55017 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cacna1bO55017 Wwc2-201ENSMUST00000057561 8678 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cacna1bO55017 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cacna1bO55017 Myg1-202ENSMUST00000113682 1480 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cacna1bO55017 Ccnh-204ENSMUST00000164127 1718 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Cacna1bO55017 Ephx3-202ENSMUST00000162117 1590 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cacna1bO55017 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC14.07□□□□□ -0.16
Cacna1bO55017 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cacna1bO55017 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cacna1bO55017 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cacna1bO55017 Srcin1-202ENSMUST00000107593 3733 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Cacna1bO55017 E2f3-203ENSMUST00000221536 4597 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cacna1bO55017 E2f3-204ENSMUST00000222730 4579 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 35.6 ms