Protein–RNA interactions for Protein: O54990

Prom1, Prominin-1, mousemouse

Predictions only

Length 867 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prom1O54990 4930500L23Rik-201ENSMUST00000198000 747 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Prom1O54990 Gm19265-201ENSMUST00000201818 894 ntTSL 3 BASIC16.09■□□□□ 0.17
Prom1O54990 Gm6916-202ENSMUST00000205523 195 ntBASIC16.09■□□□□ 0.17
Prom1O54990 Gm26953-206ENSMUST00000212840 619 ntTSL 5 BASIC16.09■□□□□ 0.17
Prom1O54990 2610528J11Rik-201ENSMUST00000030261 958 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Prom1O54990 Bccip-201ENSMUST00000033282 1244 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Prom1O54990 Mpc1-201ENSMUST00000046754 920 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
Prom1O54990 Ptp4a2-207ENSMUST00000165853 3382 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
Prom1O54990 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Prom1O54990 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Prom1O54990 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Prom1O54990 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Prom1O54990 Fntb-206ENSMUST00000137826 1442 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
Prom1O54990 Gm26560-201ENSMUST00000181240 2619 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Prom1O54990 Hs3st5-203ENSMUST00000168572 2715 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Prom1O54990 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
Prom1O54990 Acot10-201ENSMUST00000052910 1537 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
Prom1O54990 A830018L16Rik-201ENSMUST00000048613 2779 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
Prom1O54990 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Prom1O54990 Syt6-201ENSMUST00000090697 4416 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.17
Prom1O54990 Adgrb2-205ENSMUST00000106017 5104 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.17
Prom1O54990 Zmym3-208ENSMUST00000121429 1890 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
Prom1O54990 Map3k14-201ENSMUST00000021324 4246 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Prom1O54990 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Prom1O54990 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC16.08■□□□□ 0.16
Prom1O54990 Ighv8-8-201ENSMUST00000192591 358 ntAPPRIS P1 BASIC16.08■□□□□ 0.16
Prom1O54990 H2-Bl-210ENSMUST00000195833 829 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Prom1O54990 Tm2d3-207ENSMUST00000206517 905 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
Prom1O54990 Wdr45-225ENSMUST00000208443 1172 ntTSL 5 BASIC16.08■□□□□ 0.16
Prom1O54990 Gm30934-201ENSMUST00000215803 815 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Prom1O54990 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Prom1O54990 Gm29340-201ENSMUST00000188763 3854 ntBASIC16.08■□□□□ 0.16
Prom1O54990 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Prom1O54990 Hs3st5-201ENSMUST00000058738 3078 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Prom1O54990 Ccdc106-202ENSMUST00000108571 1318 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Prom1O54990 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
Prom1O54990 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Prom1O54990 Ginm1-204ENSMUST00000124838 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Prom1O54990 Disp2-202ENSMUST00000063975 1505 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Prom1O54990 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
Prom1O54990 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Prom1O54990 Gm45751-201ENSMUST00000210185 1573 ntBASIC16.08■□□□□ 0.16
Prom1O54990 2810006K23Rik-202ENSMUST00000111477 1637 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Prom1O54990 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Prom1O54990 Zscan22-204ENSMUST00000120809 1826 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Prom1O54990 Miip-201ENSMUST00000030886 1813 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Prom1O54990 Pmpca-201ENSMUST00000076431 3135 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Prom1O54990 Myl12a-206ENSMUST00000148960 1937 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Prom1O54990 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Prom1O54990 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Prom1O54990 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
Prom1O54990 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Prom1O54990 Fbxo46-202ENSMUST00000165913 2498 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Prom1O54990 Gm13074-201ENSMUST00000124848 2735 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Prom1O54990 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Prom1O54990 Sp2-203ENSMUST00000107624 3055 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Prom1O54990 Lman2l-204ENSMUST00000125304 3378 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Prom1O54990 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
Prom1O54990 Prrx2-202ENSMUST00000113592 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Prom1O54990 Tpt1-ps6-201ENSMUST00000121768 523 ntBASIC16.07■□□□□ 0.16
Prom1O54990 Atp6v1f-203ENSMUST00000149646 806 ntTSL 5 BASIC16.07■□□□□ 0.16
Prom1O54990 Gm21854-201ENSMUST00000179901 471 ntBASIC16.07■□□□□ 0.16
Prom1O54990 Tpi-rs2-201ENSMUST00000182471 756 ntBASIC16.07■□□□□ 0.16
Prom1O54990 Lamtor1-202ENSMUST00000193465 661 ntTSL 5 BASIC16.07■□□□□ 0.16
Prom1O54990 4933405L10Rik-202ENSMUST00000211852 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Prom1O54990 AC154846.1-201ENSMUST00000226278 862 ntBASIC16.07■□□□□ 0.16
Prom1O54990 Nup37-201ENSMUST00000052355 1267 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Prom1O54990 Gm9797-201ENSMUST00000052902 613 ntBASIC16.07■□□□□ 0.16
Prom1O54990 Mospd3-202ENSMUST00000111007 1318 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Prom1O54990 Gm45667-201ENSMUST00000210380 1316 ntBASIC16.07■□□□□ 0.16
Prom1O54990 Actl7b-201ENSMUST00000095080 1439 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
Prom1O54990 Gatsl3-201ENSMUST00000020699 1574 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Prom1O54990 Etfrf1-205ENSMUST00000111724 1618 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Prom1O54990 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Prom1O54990 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
Prom1O54990 Coasy-201ENSMUST00000001806 2138 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Prom1O54990 Wdr73-201ENSMUST00000026816 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Prom1O54990 Rbm22-201ENSMUST00000025506 2210 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Prom1O54990 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC16.07■□□□□ 0.16
Prom1O54990 Prelid1-201ENSMUST00000021942 2644 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Prom1O54990 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Prom1O54990 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
Prom1O54990 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Prom1O54990 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Prom1O54990 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
Prom1O54990 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Prom1O54990 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC16.06■□□□□ 0.16
Prom1O54990 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Prom1O54990 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Prom1O54990 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Prom1O54990 Gm36839-201ENSMUST00000222088 2093 ntTSL 5 BASIC16.06■□□□□ 0.16
Prom1O54990 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Prom1O54990 CN725425-202ENSMUST00000190436 2041 ntAPPRIS P5 TSL 5 BASIC16.06■□□□□ 0.16
Prom1O54990 Nupr1l-201ENSMUST00000178355 1827 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
Prom1O54990 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Prom1O54990 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC16.06■□□□□ 0.16
Prom1O54990 Dhrs1-201ENSMUST00000002403 1477 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Prom1O54990 Jpt1-201ENSMUST00000021083 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Prom1O54990 Sybu-209ENSMUST00000228639 4113 ntBASIC16.06■□□□□ 0.16
Prom1O54990 Mrps17-202ENSMUST00000118420 843 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 35.6 ms