Protein–RNA interactions for Protein: O54941

Smarce1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1, mousemouse

Known RBP Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarce1O54941 Ifnar2-202ENSMUST00000089042 2580 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Smarce1O54941 AC126250.1-201ENSMUST00000228343 1768 ntBASIC17.42■□□□□ 0.38
Smarce1O54941 Ylpm1-207ENSMUST00000168977 4893 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
Smarce1O54941 Akap17b-201ENSMUST00000051906 6003 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
Smarce1O54941 Gm13294-201ENSMUST00000121757 1330 ntBASIC17.42■□□□□ 0.38
Smarce1O54941 Mon1a-202ENSMUST00000191906 2821 ntTSL 2 BASIC17.42■□□□□ 0.38
Smarce1O54941 Hps5-201ENSMUST00000014562 4953 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
Smarce1O54941 Map2k6-201ENSMUST00000020949 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Smarce1O54941 Rassf10-201ENSMUST00000182858 3496 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
Smarce1O54941 Ntng2-204ENSMUST00000102873 1593 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Smarce1O54941 Gm8096-201ENSMUST00000209921 1591 ntBASIC17.41■□□□□ 0.38
Smarce1O54941 Nfya-206ENSMUST00000160319 1407 ntTSL 5 BASIC17.41■□□□□ 0.38
Smarce1O54941 Cops9-202ENSMUST00000112999 653 ntTSL 3 BASIC17.41■□□□□ 0.38
Smarce1O54941 Gm13464-201ENSMUST00000119418 935 ntBASIC17.41■□□□□ 0.38
Smarce1O54941 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC17.41■□□□□ 0.38
Smarce1O54941 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Smarce1O54941 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Smarce1O54941 Vopp1-202ENSMUST00000127485 2908 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Smarce1O54941 Itpk1-201ENSMUST00000046518 2918 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Smarce1O54941 Bag6-201ENSMUST00000025250 3858 ntAPPRIS P3 TSL 5 BASIC17.41■□□□□ 0.38
Smarce1O54941 Gm5105-201ENSMUST00000053318 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Smarce1O54941 Ino80-202ENSMUST00000110808 3928 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Smarce1O54941 A530083I20Rik-203ENSMUST00000214426 1855 ntTSL 5 BASIC17.41■□□□□ 0.38
Smarce1O54941 Gm10110-201ENSMUST00000081204 1891 ntTSL 5 BASIC17.41■□□□□ 0.38
Smarce1O54941 Aggf1-201ENSMUST00000022189 3249 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Smarce1O54941 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Smarce1O54941 Mccc2-201ENSMUST00000022148 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Smarce1O54941 Mcrs1-202ENSMUST00000163506 1795 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Smarce1O54941 Asah1-201ENSMUST00000034000 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Smarce1O54941 Gm11190-201ENSMUST00000132487 3414 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Smarce1O54941 Fbxl19-207ENSMUST00000206893 3449 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
Smarce1O54941 Efcab14-202ENSMUST00000106522 2636 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Smarce1O54941 Smpd3-202ENSMUST00000212896 2626 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Smarce1O54941 Lzts1-201ENSMUST00000037049 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Smarce1O54941 Osbpl10-201ENSMUST00000046627 1872 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Smarce1O54941 Rab9b-201ENSMUST00000058814 3980 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Smarce1O54941 Asap1-216ENSMUST00000177083 4415 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Smarce1O54941 Sdhb-201ENSMUST00000010007 1142 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Smarce1O54941 Gm15598-201ENSMUST00000156965 763 ntTSL 5 BASIC17.4■□□□□ 0.38
Smarce1O54941 5033428I22Rik-203ENSMUST00000210614 952 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Smarce1O54941 Ndufv2-201ENSMUST00000024909 927 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Smarce1O54941 6030498E09Rik-201ENSMUST00000050744 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Smarce1O54941 Rasl12-202ENSMUST00000165682 1903 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Smarce1O54941 H13-202ENSMUST00000089059 1743 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Smarce1O54941 Psma3-202ENSMUST00000160027 2846 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Smarce1O54941 Pigg-203ENSMUST00000119014 4573 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
Smarce1O54941 Olah-201ENSMUST00000027955 1533 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Smarce1O54941 Ntng2-201ENSMUST00000048455 1770 ntAPPRIS P4 TSL 1 (best) BASIC17.4■□□□□ 0.38
Smarce1O54941 Aldh16a1-201ENSMUST00000107815 2685 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Smarce1O54941 Nfatc4-204ENSMUST00000226357 2680 ntAPPRIS ALT2 BASIC17.4■□□□□ 0.38
Smarce1O54941 Myef2-206ENSMUST00000142718 2942 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
Smarce1O54941 Wsb1-201ENSMUST00000017821 2476 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Smarce1O54941 Skida1-201ENSMUST00000066885 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Smarce1O54941 Zbtb14-201ENSMUST00000062369 3625 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Smarce1O54941 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC17.4■□□□□ 0.38
Smarce1O54941 Epha2-201ENSMUST00000006614 3913 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Smarce1O54941 Ttc3-201ENSMUST00000117648 7417 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.38
Smarce1O54941 Itga3-201ENSMUST00000001548 4861 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.38
Smarce1O54941 Hnrnpa2b1-204ENSMUST00000203220 1638 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.38
Smarce1O54941 AC131743.5-201ENSMUST00000220775 1618 ntBASIC17.39■□□□□ 0.38
Smarce1O54941 Chac1-201ENSMUST00000028780 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Smarce1O54941 Rbbp8nl-201ENSMUST00000038529 2319 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Smarce1O54941 Hmga2-201ENSMUST00000072777 3710 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Smarce1O54941 App-204ENSMUST00000227021 3264 ntAPPRIS ALT2 BASIC17.39■□□□□ 0.38
Smarce1O54941 Rabggta-202ENSMUST00000163889 1886 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Smarce1O54941 Fgfr1op-202ENSMUST00000097419 3505 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.38
Smarce1O54941 Gdap1l1-201ENSMUST00000018087 2220 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Smarce1O54941 Lin54-201ENSMUST00000046154 4451 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Smarce1O54941 Eif2a-201ENSMUST00000029387 2299 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Smarce1O54941 Lrch4-202ENSMUST00000175968 2036 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
Smarce1O54941 Olfml2a-201ENSMUST00000057279 5579 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Smarce1O54941 Zmym3-204ENSMUST00000118092 1502 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Smarce1O54941 Nme1-202ENSMUST00000107844 452 ntTSL 3 BASIC17.39■□□□□ 0.37
Smarce1O54941 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Smarce1O54941 Erdr1-202ENSMUST00000177671 708 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
Smarce1O54941 H2-Bl-211ENSMUST00000195838 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Smarce1O54941 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC17.39■□□□□ 0.37
Smarce1O54941 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Smarce1O54941 Itgb1-201ENSMUST00000090006 3815 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Smarce1O54941 Plekha1-201ENSMUST00000048180 3321 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Smarce1O54941 Rspry1-207ENSMUST00000212729 2800 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Smarce1O54941 Mtss1-201ENSMUST00000080371 4938 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Smarce1O54941 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Smarce1O54941 Krt74-201ENSMUST00000088018 1648 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
Smarce1O54941 Kcnj8-201ENSMUST00000032374 2269 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Smarce1O54941 Tle3-210ENSMUST00000161207 2592 ntTSL 5 BASIC17.38■□□□□ 0.37
Smarce1O54941 Sf1-204ENSMUST00000113489 2863 ntTSL 5 BASIC17.38■□□□□ 0.37
Smarce1O54941 Tc2n-203ENSMUST00000160830 2005 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Smarce1O54941 Eif2d-202ENSMUST00000068805 2009 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Smarce1O54941 Ccp110-202ENSMUST00000106557 5073 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Smarce1O54941 C230004F18Rik-203ENSMUST00000137153 2138 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Smarce1O54941 Pard3-222ENSMUST00000162536 5175 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
Smarce1O54941 Skap1-205ENSMUST00000107662 1861 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Smarce1O54941 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Smarce1O54941 Gm13344-201ENSMUST00000137714 1557 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Smarce1O54941 Pcsk4-201ENSMUST00000020340 2539 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Smarce1O54941 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Smarce1O54941 Gm7153-201ENSMUST00000117092 455 ntBASIC17.38■□□□□ 0.37
Smarce1O54941 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC17.38■□□□□ 0.37
Smarce1O54941 Fbxo17-205ENSMUST00000167118 861 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 24.5 ms