Protein–RNA interactions for Protein: O54788

Dffb, DNA fragmentation factor subunit beta, mousemouse

Known RBP Predictions only

Length 344 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DffbO54788 Rasa4-202ENSMUST00000100570 2660 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
DffbO54788 Col9a2-201ENSMUST00000030372 2924 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
DffbO54788 Mapk8-201ENSMUST00000022504 2587 ntAPPRIS P5 TSL 1 (best) BASIC12.6□□□□□ -0.39
DffbO54788 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
DffbO54788 Zfp202-201ENSMUST00000026693 3461 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
DffbO54788 Peli3-202ENSMUST00000120475 2988 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
DffbO54788 Ctps-201ENSMUST00000030381 2705 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
DffbO54788 Kcnj12-201ENSMUST00000041944 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
DffbO54788 Pgd-201ENSMUST00000084124 2218 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
DffbO54788 Nrip2-202ENSMUST00000120405 1468 ntTSL 2 BASIC12.59□□□□□ -0.39
DffbO54788 Lipo3-201ENSMUST00000025694 2768 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
DffbO54788 Ablim1-209ENSMUST00000111546 2267 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
DffbO54788 Pcyox1l-201ENSMUST00000025472 2017 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
DffbO54788 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
DffbO54788 Fkbp10-201ENSMUST00000001595 2584 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
DffbO54788 Phtf2-201ENSMUST00000118174 4840 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
DffbO54788 Car7-201ENSMUST00000056051 1538 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
DffbO54788 Dnajb5-204ENSMUST00000107973 2300 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
DffbO54788 Arl5b-202ENSMUST00000069870 6981 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
DffbO54788 Arpc1b-201ENSMUST00000085679 3105 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
DffbO54788 Gucd1-201ENSMUST00000039796 3500 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
DffbO54788 Ghdc-201ENSMUST00000017891 2462 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
DffbO54788 Gm44645-201ENSMUST00000205492 1653 ntBASIC12.59□□□□□ -0.39
DffbO54788 Rhox2h-201ENSMUST00000115162 779 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
DffbO54788 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
DffbO54788 Gm18489-201ENSMUST00000172565 551 ntBASIC12.59□□□□□ -0.39
DffbO54788 Gm20496-202ENSMUST00000173770 523 ntTSL 5 BASIC12.59□□□□□ -0.39
DffbO54788 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC12.59□□□□□ -0.39
DffbO54788 Gm18669-201ENSMUST00000216049 778 ntBASIC12.59□□□□□ -0.39
DffbO54788 Cort-201ENSMUST00000030815 677 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
DffbO54788 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
DffbO54788 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
DffbO54788 Papd7-201ENSMUST00000044081 3994 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
DffbO54788 Pdk2-201ENSMUST00000038431 2246 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
DffbO54788 Ppp1r3g-201ENSMUST00000132661 2361 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
DffbO54788 Klrg1-201ENSMUST00000032207 1414 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
DffbO54788 Trim59-201ENSMUST00000107802 2939 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
DffbO54788 Cdkn2aip-201ENSMUST00000038738 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
DffbO54788 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
DffbO54788 Tacc3-201ENSMUST00000074849 2669 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
DffbO54788 Clic6-201ENSMUST00000023670 3758 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
DffbO54788 Shc4-203ENSMUST00000110480 3671 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
DffbO54788 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC12.59□□□□□ -0.39
DffbO54788 Ntrk2-208ENSMUST00000225583 2719 ntBASIC12.59□□□□□ -0.39
DffbO54788 BC003965-201ENSMUST00000088307 3022 ntAPPRIS P1 TSL 2 BASIC12.59□□□□□ -0.39
DffbO54788 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
DffbO54788 Usp33-201ENSMUST00000026507 4153 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
DffbO54788 Celf4-207ENSMUST00000225477 2626 ntAPPRIS P3 BASIC12.58□□□□□ -0.39
DffbO54788 Gm10457-201ENSMUST00000222619 1906 ntTSL 2 BASIC12.58□□□□□ -0.39
DffbO54788 Slc39a4-201ENSMUST00000073428 2224 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
DffbO54788 Psma3-202ENSMUST00000160027 2846 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
DffbO54788 Gpank1-202ENSMUST00000165306 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
DffbO54788 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
DffbO54788 Ptger1-201ENSMUST00000019608 4694 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
DffbO54788 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC12.58□□□□□ -0.4
DffbO54788 Gm9103-201ENSMUST00000119371 405 ntBASIC12.58□□□□□ -0.4
DffbO54788 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC12.58□□□□□ -0.4
DffbO54788 Mfng-201ENSMUST00000018313 1865 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
DffbO54788 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
DffbO54788 Gm5253-201ENSMUST00000187104 1025 ntBASIC12.58□□□□□ -0.4
DffbO54788 Ank2-226ENSMUST00000189368 339 ntBASIC12.58□□□□□ -0.4
DffbO54788 Gm9682-201ENSMUST00000197505 556 ntBASIC12.58□□□□□ -0.4
DffbO54788 Gm43570-201ENSMUST00000199951 3688 ntBASIC12.58□□□□□ -0.4
DffbO54788 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC12.58□□□□□ -0.4
DffbO54788 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC12.58□□□□□ -0.4
DffbO54788 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
DffbO54788 Anxa2-201ENSMUST00000034756 1447 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
DffbO54788 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
DffbO54788 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
DffbO54788 Apol7d-201ENSMUST00000097699 826 ntTSL 2 BASIC12.58□□□□□ -0.4
DffbO54788 Slc25a37-201ENSMUST00000037064 4174 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
DffbO54788 Abi3-201ENSMUST00000059026 4006 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
DffbO54788 Slc19a2-202ENSMUST00000159230 3432 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
DffbO54788 Lrp10-201ENSMUST00000022782 4228 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
DffbO54788 Stx5a-201ENSMUST00000010254 1780 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
DffbO54788 Prpf31-202ENSMUST00000108636 1798 ntTSL 5 BASIC12.58□□□□□ -0.4
DffbO54788 Taf2-201ENSMUST00000041733 5031 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
DffbO54788 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
DffbO54788 Arhgap4-204ENSMUST00000114406 2749 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
DffbO54788 Ror2-201ENSMUST00000021918 3985 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
DffbO54788 Foxj3-201ENSMUST00000044564 4789 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
DffbO54788 Ptprn2-201ENSMUST00000070733 3201 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
DffbO54788 Trmt1-205ENSMUST00000125370 2114 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
DffbO54788 Leng8-201ENSMUST00000037472 5105 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
DffbO54788 Pls1-201ENSMUST00000093800 3704 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
DffbO54788 Echdc1-202ENSMUST00000160399 1845 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
DffbO54788 Wsb1-201ENSMUST00000017821 2476 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
DffbO54788 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC12.57□□□□□ -0.4
DffbO54788 Sema3b-201ENSMUST00000073448 2987 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
DffbO54788 Rbm47-201ENSMUST00000094756 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
DffbO54788 Grik4-202ENSMUST00000114865 5887 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
DffbO54788 Pars2-201ENSMUST00000058905 2191 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
DffbO54788 Ube3a-201ENSMUST00000107537 4911 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
DffbO54788 Gstt2-201ENSMUST00000038257 1370 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
DffbO54788 Spon2-201ENSMUST00000046186 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
DffbO54788 Marveld2-203ENSMUST00000168772 1888 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
DffbO54788 Lims2-201ENSMUST00000025254 1870 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
DffbO54788 B4galnt1-201ENSMUST00000006914 2395 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
DffbO54788 Chtf8-202ENSMUST00000175940 2890 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
DffbO54788 Trim27-201ENSMUST00000021761 4204 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 72.8 ms