Protein–RNA interactions for Protein: O35604

Npc1, Niemann-Pick C1 protein, mousemouse

Predictions only

Length 1,277 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Npc1O35604 9130230N09Rik-201ENSMUST00000174568 663 ntTSL 3 BASIC14.3□□□□□ -0.12
Npc1O35604 Prr29-205ENSMUST00000190268 1141 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Npc1O35604 Tpi-rs5-201ENSMUST00000216947 774 ntBASIC14.3□□□□□ -0.12
Npc1O35604 AC131710.1-201ENSMUST00000228336 990 ntBASIC14.3□□□□□ -0.12
Npc1O35604 Sbk2-201ENSMUST00000032598 1139 ntAPPRIS P1 TSL 3 BASIC14.3□□□□□ -0.12
Npc1O35604 Atp6v0b-201ENSMUST00000036380 1000 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Npc1O35604 Vps25-202ENSMUST00000042477 1106 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Npc1O35604 Syt3-201ENSMUST00000118831 2627 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Npc1O35604 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC14.3□□□□□ -0.12
Npc1O35604 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Npc1O35604 Alx4-201ENSMUST00000042078 5253 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Npc1O35604 Coq10a-205ENSMUST00000220027 1307 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Npc1O35604 Kcnq2-217ENSMUST00000149964 8209 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Npc1O35604 Cpeb2-205ENSMUST00000169035 7050 ntAPPRIS P2 TSL 5 BASIC14.3□□□□□ -0.12
Npc1O35604 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Npc1O35604 Six4-201ENSMUST00000043208 6402 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Npc1O35604 Maea-201ENSMUST00000114449 2193 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Npc1O35604 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Npc1O35604 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Npc1O35604 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC14.3□□□□□ -0.12
Npc1O35604 Fbxl5-207ENSMUST00000124610 2306 ntTSL 5 BASIC14.3□□□□□ -0.12
Npc1O35604 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Npc1O35604 Ephx3-202ENSMUST00000162117 1590 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Npc1O35604 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC14.3□□□□□ -0.12
Npc1O35604 Krt14-201ENSMUST00000007272 1698 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Npc1O35604 AI849053-201ENSMUST00000181021 2658 ntTSL 3 BASIC14.29□□□□□ -0.12
Npc1O35604 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Npc1O35604 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Npc1O35604 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Npc1O35604 Ankrd10-202ENSMUST00000169782 5156 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Npc1O35604 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Npc1O35604 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC14.29□□□□□ -0.12
Npc1O35604 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Npc1O35604 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Npc1O35604 Lrp11-201ENSMUST00000019931 3386 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Npc1O35604 Wnt11-201ENSMUST00000067495 3451 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Npc1O35604 Trav3-1-201ENSMUST00000103569 385 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
Npc1O35604 Trav3-4-201ENSMUST00000103670 458 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
Npc1O35604 Meig1-204ENSMUST00000115083 567 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
Npc1O35604 Gm8597-201ENSMUST00000191525 1109 ntBASIC14.29□□□□□ -0.12
Npc1O35604 Gm37171-201ENSMUST00000192636 1185 ntBASIC14.29□□□□□ -0.12
Npc1O35604 6030443J06Rik-204ENSMUST00000195898 786 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Npc1O35604 Gm44335-201ENSMUST00000196879 141 ntBASIC14.29□□□□□ -0.12
Npc1O35604 Gm44297-201ENSMUST00000198304 141 ntBASIC14.29□□□□□ -0.12
Npc1O35604 Gm44346-201ENSMUST00000198851 141 ntBASIC14.29□□□□□ -0.12
Npc1O35604 Gm29683-202ENSMUST00000208511 720 ntTSL 3 BASIC14.29□□□□□ -0.12
Npc1O35604 Atf5-203ENSMUST00000209072 595 ntTSL 5 BASIC14.29□□□□□ -0.12
Npc1O35604 Snrnp25-201ENSMUST00000039601 821 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Npc1O35604 Zfp410-201ENSMUST00000045931 2597 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Npc1O35604 4933412A08Rik-201ENSMUST00000061046 1343 ntBASIC14.29□□□□□ -0.12
Npc1O35604 Akirin2-201ENSMUST00000084299 1397 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Npc1O35604 Sbk2-205ENSMUST00000208109 1422 ntTSL 5 BASIC14.29□□□□□ -0.12
Npc1O35604 Fech-201ENSMUST00000025484 2901 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Npc1O35604 Gm27198-201ENSMUST00000184172 1517 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Npc1O35604 Fbxl12-205ENSMUST00000140702 1555 ntBASIC14.29□□□□□ -0.12
Npc1O35604 Gm12620-201ENSMUST00000119791 1986 ntBASIC14.29□□□□□ -0.12
Npc1O35604 Gm12612-201ENSMUST00000140182 1986 ntBASIC14.29□□□□□ -0.12
Npc1O35604 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Npc1O35604 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Npc1O35604 Nell1-201ENSMUST00000081872 6617 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Npc1O35604 Kctd14-204ENSMUST00000205577 2310 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Npc1O35604 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Npc1O35604 Chdh-201ENSMUST00000067620 5690 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Npc1O35604 Syt17-204ENSMUST00000203796 2957 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Npc1O35604 Ppard-201ENSMUST00000002320 3218 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Npc1O35604 Reep1-201ENSMUST00000121469 3924 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Npc1O35604 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Npc1O35604 Edem3-201ENSMUST00000059498 6327 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Npc1O35604 Dock4-201ENSMUST00000037488 8552 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Npc1O35604 Bad-203ENSMUST00000113426 740 ntTSL 5 BASIC14.28□□□□□ -0.12
Npc1O35604 Ercc8-202ENSMUST00000120672 1144 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Npc1O35604 Gm15706-201ENSMUST00000139612 899 ntTSL 2 BASIC14.28□□□□□ -0.12
Npc1O35604 Gm13849-201ENSMUST00000153328 835 ntTSL 5 BASIC14.28□□□□□ -0.12
Npc1O35604 Lpar5-203ENSMUST00000171989 1458 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
Npc1O35604 Psmg3-202ENSMUST00000182602 733 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Npc1O35604 9330121J05Rik-201ENSMUST00000192267 3009 ntBASIC14.28□□□□□ -0.12
Npc1O35604 Slc12a5-208ENSMUST00000202479 1202 ntTSL 5 BASIC14.28□□□□□ -0.12
Npc1O35604 Luc7l3-201ENSMUST00000021226 3373 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Npc1O35604 Stard3nl-209ENSMUST00000221380 1268 ntTSL 5 BASIC14.28□□□□□ -0.12
Npc1O35604 Ftl1-ps1-202ENSMUST00000222435 938 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
Npc1O35604 Ap5m1-205ENSMUST00000227431 3757 ntBASIC14.28□□□□□ -0.12
Npc1O35604 Trem2-201ENSMUST00000024791 1088 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Npc1O35604 Rubcn-201ENSMUST00000040986 5257 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Npc1O35604 Npb-201ENSMUST00000061309 418 ntTSL 3 BASIC14.28□□□□□ -0.12
Npc1O35604 Smim4-202ENSMUST00000064032 791 ntTSL 3 BASIC14.28□□□□□ -0.12
Npc1O35604 Mok-202ENSMUST00000070565 1693 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Npc1O35604 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Npc1O35604 Dsel-201ENSMUST00000035462 5759 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Npc1O35604 AC013548.1-201ENSMUST00000228850 4738 ntAPPRIS P1 BASIC14.27□□□□□ -0.12
Npc1O35604 Trnt1-201ENSMUST00000057578 2283 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Npc1O35604 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Npc1O35604 Kmt5b-206ENSMUST00000113973 6130 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
Npc1O35604 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Npc1O35604 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Npc1O35604 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Npc1O35604 Krt74-201ENSMUST00000088018 1648 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.12
Npc1O35604 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Npc1O35604 Rgs3-201ENSMUST00000065870 4698 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Npc1O35604 Nfe2l1-201ENSMUST00000081775 4654 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
Npc1O35604 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 56.5 ms