Protein–RNA interactions for Protein: O35449

Prrt1, Proline-rich transmembrane protein 1, mousemouse

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prrt1O35449 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Prrt1O35449 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC12.38□□□□□ -0.43
Prrt1O35449 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Prrt1O35449 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Prrt1O35449 1700021A07Rik-203ENSMUST00000188024 404 ntTSL 3 BASIC12.38□□□□□ -0.43
Prrt1O35449 Gm45328-201ENSMUST00000210942 917 ntBASIC12.38□□□□□ -0.43
Prrt1O35449 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC12.38□□□□□ -0.43
Prrt1O35449 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Prrt1O35449 Ankrd34b-203ENSMUST00000168871 3397 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Prrt1O35449 Lrriq4-202ENSMUST00000108267 2387 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Prrt1O35449 Gars-201ENSMUST00000003572 2380 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Prrt1O35449 Clcnkb-202ENSMUST00000105788 2490 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Prrt1O35449 Rbbp5-206ENSMUST00000190825 2456 ntAPPRIS ALT1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Prrt1O35449 Adamts7-208ENSMUST00000167122 5338 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Prrt1O35449 Igsf9b-202ENSMUST00000133213 4239 ntAPPRIS P2 TSL 5 BASIC12.38□□□□□ -0.43
Prrt1O35449 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC12.38□□□□□ -0.43
Prrt1O35449 Prss23-201ENSMUST00000041761 3228 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Prrt1O35449 Sh3bp5-201ENSMUST00000091903 2684 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Prrt1O35449 Fam3a-205ENSMUST00000114142 1586 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Prrt1O35449 Pid1-204ENSMUST00000176559 1564 ntTSL 2 BASIC12.38□□□□□ -0.43
Prrt1O35449 Gtf2ird1-229ENSMUST00000202554 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Prrt1O35449 Diaph1-202ENSMUST00000080033 4378 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Prrt1O35449 Heatr3-201ENSMUST00000034079 3251 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Prrt1O35449 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Prrt1O35449 Hp1bp3-202ENSMUST00000097836 3113 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Prrt1O35449 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC12.37□□□□□ -0.43
Prrt1O35449 Gm14451-201ENSMUST00000121581 1542 ntBASIC12.37□□□□□ -0.43
Prrt1O35449 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Prrt1O35449 Megf6-201ENSMUST00000030897 6851 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Prrt1O35449 Dnase1l1-201ENSMUST00000019232 1625 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Prrt1O35449 Peli3-202ENSMUST00000120475 2988 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Prrt1O35449 March8-213ENSMUST00000203193 4245 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Prrt1O35449 Gtf2ird1-205ENSMUST00000100654 3156 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Prrt1O35449 Hes2-201ENSMUST00000030782 2521 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Prrt1O35449 Ppp2r5b-201ENSMUST00000025695 2742 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Prrt1O35449 Asb16-201ENSMUST00000036467 2843 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Prrt1O35449 Gm15358-201ENSMUST00000119249 520 ntBASIC12.37□□□□□ -0.43
Prrt1O35449 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Prrt1O35449 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC12.37□□□□□ -0.43
Prrt1O35449 Gm11615-201ENSMUST00000156205 818 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Prrt1O35449 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC12.37□□□□□ -0.43
Prrt1O35449 AC122024.2-201ENSMUST00000220086 871 ntBASIC12.37□□□□□ -0.43
Prrt1O35449 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC12.37□□□□□ -0.43
Prrt1O35449 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Prrt1O35449 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC12.37□□□□□ -0.43
Prrt1O35449 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
Prrt1O35449 Tagap1-201ENSMUST00000063683 2358 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Prrt1O35449 Slc4a1ap-213ENSMUST00000202950 2499 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Prrt1O35449 Rbm47-201ENSMUST00000094756 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Prrt1O35449 Zbtb5-202ENSMUST00000107817 3867 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Prrt1O35449 Camk2d-202ENSMUST00000066466 4075 ntAPPRIS ALT1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Prrt1O35449 Pcyox1-201ENSMUST00000032065 4295 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Prrt1O35449 Psap-202ENSMUST00000105465 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Prrt1O35449 Gm38197-201ENSMUST00000192320 2122 ntBASIC12.37□□□□□ -0.43
Prrt1O35449 Cyp4x1os-201ENSMUST00000153951 2003 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Prrt1O35449 Ccdc181-201ENSMUST00000027867 1909 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Prrt1O35449 Col22a1-202ENSMUST00000159993 8809 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Prrt1O35449 Renbp-201ENSMUST00000114379 1318 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Prrt1O35449 Tmprss9-201ENSMUST00000105333 3497 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Prrt1O35449 Tle3-204ENSMUST00000159386 4527 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Prrt1O35449 Fkbp10-201ENSMUST00000001595 2584 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Prrt1O35449 Vars-201ENSMUST00000087315 4137 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Prrt1O35449 Rnf40-202ENSMUST00000205694 5279 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Prrt1O35449 Itpripl1-203ENSMUST00000154021 1753 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Prrt1O35449 Cacna1g-206ENSMUST00000107788 8050 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Prrt1O35449 Cacna1g-211ENSMUST00000107793 8071 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Prrt1O35449 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
Prrt1O35449 Zfp467-205ENSMUST00000114560 3266 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Prrt1O35449 Rasgrp2-205ENSMUST00000113471 535 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Prrt1O35449 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC12.36□□□□□ -0.43
Prrt1O35449 Gm12497-201ENSMUST00000138778 237 ntBASIC12.36□□□□□ -0.43
Prrt1O35449 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC12.36□□□□□ -0.43
Prrt1O35449 Noct-203ENSMUST00000167780 2992 ntAPPRIS P2 TSL 5 BASIC12.36□□□□□ -0.43
Prrt1O35449 Tpi-rs2-201ENSMUST00000182471 756 ntBASIC12.36□□□□□ -0.43
Prrt1O35449 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC12.36□□□□□ -0.43
Prrt1O35449 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Prrt1O35449 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Prrt1O35449 Ighv6-1-201ENSMUST00000193612 343 ntBASIC12.36□□□□□ -0.43
Prrt1O35449 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC12.36□□□□□ -0.43
Prrt1O35449 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Prrt1O35449 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
Prrt1O35449 Nrxn1-201ENSMUST00000054059 4697 ntTSL 5 BASIC12.36□□□□□ -0.43
Prrt1O35449 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Prrt1O35449 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Prrt1O35449 Mlkl-201ENSMUST00000056157 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Prrt1O35449 Aste1-201ENSMUST00000035181 2755 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Prrt1O35449 Tcn2-204ENSMUST00000109990 1914 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Prrt1O35449 Snx8-205ENSMUST00000196566 1914 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Prrt1O35449 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Prrt1O35449 Slc5a2-202ENSMUST00000118169 2277 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Prrt1O35449 Dnase1l2-202ENSMUST00000119932 1629 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Prrt1O35449 4732463B04Rik-201ENSMUST00000180751 2932 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Prrt1O35449 Fbln7-201ENSMUST00000028864 2905 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Prrt1O35449 Chrnb1-201ENSMUST00000045971 2155 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Prrt1O35449 Ssh3-202ENSMUST00000113852 2735 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Prrt1O35449 Ssh3-201ENSMUST00000037992 2728 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Prrt1O35449 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC12.36□□□□□ -0.43
Prrt1O35449 Fam76a-201ENSMUST00000030696 3053 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Prrt1O35449 Sphk2-201ENSMUST00000072836 2968 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Prrt1O35449 Cyp27a1-201ENSMUST00000027356 1892 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 40.4 ms