Protein–RNA interactions for Protein: O35206

Col15a1, Collagen alpha-1(XV) chain, mousemouse

Predictions only

Length 1,367 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col15a1O35206 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Col15a1O35206 AC174678.1-201ENSMUST00000228007 2749 ntBASIC18.57■□□□□ 0.56
Col15a1O35206 4930402H24Rik-202ENSMUST00000110243 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Col15a1O35206 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC18.57■□□□□ 0.56
Col15a1O35206 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Col15a1O35206 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Col15a1O35206 Wfdc3-201ENSMUST00000103096 911 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Col15a1O35206 Apoc3-203ENSMUST00000121916 709 ntTSL 2 BASIC18.56■□□□□ 0.56
Col15a1O35206 Gm14285-201ENSMUST00000146049 380 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Col15a1O35206 Gm4804-201ENSMUST00000182234 999 ntBASIC18.56■□□□□ 0.56
Col15a1O35206 2810429I04Rik-210ENSMUST00000189464 868 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Col15a1O35206 Gm18307-201ENSMUST00000206864 949 ntBASIC18.56■□□□□ 0.56
Col15a1O35206 Gm7067-201ENSMUST00000207698 1249 ntBASIC18.56■□□□□ 0.56
Col15a1O35206 1700011B04Rik-206ENSMUST00000221013 824 ntTSL 5 BASIC18.56■□□□□ 0.56
Col15a1O35206 Tmem242-201ENSMUST00000005053 948 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Col15a1O35206 Pcgf1-201ENSMUST00000092614 866 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Col15a1O35206 Tppp3-203ENSMUST00000177126 1396 ntAPPRIS P1 TSL 3 BASIC18.56■□□□□ 0.56
Col15a1O35206 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Col15a1O35206 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Col15a1O35206 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC18.56■□□□□ 0.56
Col15a1O35206 Cyp20a1-201ENSMUST00000060608 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Col15a1O35206 Zfp57-201ENSMUST00000069250 1749 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
Col15a1O35206 3830417A13Rik-201ENSMUST00000033522 1649 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Col15a1O35206 AC114008.2-201ENSMUST00000227699 1347 ntBASIC18.56■□□□□ 0.56
Col15a1O35206 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Col15a1O35206 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Col15a1O35206 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Col15a1O35206 Gm12390-201ENSMUST00000117897 397 ntBASIC18.55■□□□□ 0.56
Col15a1O35206 Med28-203ENSMUST00000119579 636 ntTSL 3 BASIC18.55■□□□□ 0.56
Col15a1O35206 Mrps10-202ENSMUST00000119841 1113 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Col15a1O35206 H60b-202ENSMUST00000131558 1080 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
Col15a1O35206 Nabp1-202ENSMUST00000185534 708 ntTSL 2 BASIC18.55■□□□□ 0.56
Col15a1O35206 Gm2495-201ENSMUST00000191160 466 ntBASIC18.55■□□□□ 0.56
Col15a1O35206 Rpl18-208ENSMUST00000211061 552 ntTSL 5 BASIC18.55■□□□□ 0.56
Col15a1O35206 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Col15a1O35206 Olfr373-201ENSMUST00000074540 945 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
Col15a1O35206 Rnase2b-201ENSMUST00000075648 759 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
Col15a1O35206 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Col15a1O35206 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Col15a1O35206 Zfp707-201ENSMUST00000109966 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Col15a1O35206 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Col15a1O35206 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Col15a1O35206 Ptpa-203ENSMUST00000113603 2169 ntTSL 5 BASIC18.55■□□□□ 0.56
Col15a1O35206 Gm26882-201ENSMUST00000181611 1537 ntTSL 5 BASIC18.55■□□□□ 0.56
Col15a1O35206 Gm13074-201ENSMUST00000124848 2735 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Col15a1O35206 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
Col15a1O35206 Sp2-203ENSMUST00000107624 3055 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Col15a1O35206 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC18.55■□□□□ 0.56
Col15a1O35206 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Col15a1O35206 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Col15a1O35206 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC18.55■□□□□ 0.56
Col15a1O35206 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Col15a1O35206 Fkbp10-201ENSMUST00000001595 2584 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Col15a1O35206 Dnajc5g-201ENSMUST00000066544 1565 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
Col15a1O35206 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Col15a1O35206 Hoxc10-201ENSMUST00000001699 1909 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Col15a1O35206 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
Col15a1O35206 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Col15a1O35206 Gcnt2-205ENSMUST00000225759 1366 ntAPPRIS ALT2 BASIC18.55■□□□□ 0.56
Col15a1O35206 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Col15a1O35206 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Col15a1O35206 Selenoh-202ENSMUST00000102647 654 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Col15a1O35206 Nudt1-203ENSMUST00000110825 599 ntTSL 2 BASIC18.55■□□□□ 0.56
Col15a1O35206 Ercc1-203ENSMUST00000160369 1175 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Col15a1O35206 Pcgf1-202ENSMUST00000165164 918 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Col15a1O35206 Gm6244-201ENSMUST00000178732 841 ntBASIC18.55■□□□□ 0.56
Col15a1O35206 Gm34086-201ENSMUST00000196486 743 ntTSL 3 BASIC18.55■□□□□ 0.56
Col15a1O35206 Gm6007-201ENSMUST00000208170 823 ntBASIC18.55■□□□□ 0.56
Col15a1O35206 A730061H03Rik-201ENSMUST00000066106 465 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
Col15a1O35206 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Col15a1O35206 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Col15a1O35206 F420014N23Rik-201ENSMUST00000181578 2396 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Col15a1O35206 Pdia4-201ENSMUST00000077290 2399 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Col15a1O35206 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Col15a1O35206 D830030K20Rik-201ENSMUST00000112797 1695 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Col15a1O35206 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Col15a1O35206 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Col15a1O35206 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
Col15a1O35206 Tbx6-201ENSMUST00000094037 1727 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Col15a1O35206 Zfp296-201ENSMUST00000108453 1530 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Col15a1O35206 Pnck-201ENSMUST00000002087 1536 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Col15a1O35206 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Col15a1O35206 Mif4gd-202ENSMUST00000106506 993 ntTSL 3 BASIC18.54■□□□□ 0.56
Col15a1O35206 Gm15821-201ENSMUST00000121995 1210 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Col15a1O35206 Mir1938-201ENSMUST00000158746 100 ntBASIC18.54■□□□□ 0.56
Col15a1O35206 1700037F24Rik-201ENSMUST00000181254 973 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Col15a1O35206 1700094J05Rik-202ENSMUST00000190491 997 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Col15a1O35206 Ube2a-205ENSMUST00000201068 1298 ntTSL 5 BASIC18.54■□□□□ 0.56
Col15a1O35206 Ndufs6-201ENSMUST00000022097 568 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Col15a1O35206 Pogk-204ENSMUST00000135673 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Col15a1O35206 Car7-202ENSMUST00000159416 1943 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Col15a1O35206 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
Col15a1O35206 Abcf2-201ENSMUST00000030795 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Col15a1O35206 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Col15a1O35206 Ptpn6-203ENSMUST00000171549 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Col15a1O35206 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Col15a1O35206 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Col15a1O35206 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC18.53■□□□□ 0.56
Col15a1O35206 Nfe2-205ENSMUST00000133600 1605 ntTSL 5 BASIC18.53■□□□□ 0.56
Col15a1O35206 Zbtb4-201ENSMUST00000108638 2552 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 36.6 ms