Protein–RNA interactions for Protein: O35188

Cx3cl1, Fractalkine, mousemouse

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cx3cl1O35188 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC13.76□□□□□ -0.21
Cx3cl1O35188 Pcdha11-202ENSMUST00000115657 5360 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Cx3cl1O35188 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Cx3cl1O35188 Grk5-201ENSMUST00000003313 3165 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Cx3cl1O35188 Ghr-201ENSMUST00000069451 4175 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Cx3cl1O35188 Ppp1r8-201ENSMUST00000030702 2037 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
Cx3cl1O35188 Hspa1a-201ENSMUST00000087328 2967 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
Cx3cl1O35188 Gm3373-202ENSMUST00000177556 1955 ntAPPRIS P5 TSL 5 BASIC13.76□□□□□ -0.21
Cx3cl1O35188 Gm3500-201ENSMUST00000177986 1955 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
Cx3cl1O35188 Ppip5k2-201ENSMUST00000042509 5882 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Cx3cl1O35188 Gm3252-201ENSMUST00000165619 1949 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
Cx3cl1O35188 Gm9768-201ENSMUST00000206007 2861 ntBASIC13.76□□□□□ -0.21
Cx3cl1O35188 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Cx3cl1O35188 Gm14780-201ENSMUST00000118387 2737 ntBASIC13.76□□□□□ -0.21
Cx3cl1O35188 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cx3cl1O35188 Rrnad1-206ENSMUST00000160074 1620 ntTSL 5 BASIC13.75□□□□□ -0.21
Cx3cl1O35188 Sfn-201ENSMUST00000057311 1613 ntAPPRIS P1 BASIC13.75□□□□□ -0.21
Cx3cl1O35188 Ncs1-201ENSMUST00000000199 4653 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cx3cl1O35188 Dnajc6-205ENSMUST00000106933 5191 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cx3cl1O35188 Gm37736-201ENSMUST00000193564 2802 ntBASIC13.75□□□□□ -0.21
Cx3cl1O35188 Olfr718-ps1-203ENSMUST00000215102 4913 ntAPPRIS P5 TSL 5 BASIC13.75□□□□□ -0.21
Cx3cl1O35188 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC13.75□□□□□ -0.21
Cx3cl1O35188 Eif2d-202ENSMUST00000068805 2009 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cx3cl1O35188 Mef2b-205ENSMUST00000163756 1337 ntAPPRIS P3 TSL 2 BASIC13.75□□□□□ -0.21
Cx3cl1O35188 Foxs1-201ENSMUST00000099200 1311 ntAPPRIS P1 BASIC13.75□□□□□ -0.21
Cx3cl1O35188 Gm23935-201ENSMUST00000102303 57 ntBASIC13.75□□□□□ -0.21
Cx3cl1O35188 Gm24270-201ENSMUST00000102326 57 ntBASIC13.75□□□□□ -0.21
Cx3cl1O35188 Ercc8-202ENSMUST00000120672 1144 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Cx3cl1O35188 Gm11745-201ENSMUST00000121669 448 ntBASIC13.75□□□□□ -0.21
Cx3cl1O35188 Ms4a6d-202ENSMUST00000125291 679 ntTSL 3 BASIC13.75□□□□□ -0.21
Cx3cl1O35188 Gm24245-201ENSMUST00000157318 57 ntBASIC13.75□□□□□ -0.21
Cx3cl1O35188 Fxyd5-208ENSMUST00000161805 1166 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cx3cl1O35188 Gm17251-201ENSMUST00000170103 925 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Cx3cl1O35188 Prss29-201ENSMUST00000024993 1178 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cx3cl1O35188 Gm5867-201ENSMUST00000063197 592 ntBASIC13.75□□□□□ -0.21
Cx3cl1O35188 A330035P11Rik-202ENSMUST00000144926 3074 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Cx3cl1O35188 Rgs14-201ENSMUST00000063771 2356 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cx3cl1O35188 Evx1os-201ENSMUST00000125305 2916 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Cx3cl1O35188 Cnnm2-201ENSMUST00000077666 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cx3cl1O35188 Dcp1b-201ENSMUST00000073909 1748 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cx3cl1O35188 Guca1b-201ENSMUST00000024774 1668 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cx3cl1O35188 S100pbp-204ENSMUST00000106061 4426 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cx3cl1O35188 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC13.75□□□□□ -0.21
Cx3cl1O35188 Lat2-201ENSMUST00000036362 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cx3cl1O35188 Cdhr5-201ENSMUST00000080654 2133 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cx3cl1O35188 Mctp1-204ENSMUST00000125209 4715 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cx3cl1O35188 Gatsl3-201ENSMUST00000020699 1574 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cx3cl1O35188 Snx11-201ENSMUST00000021246 2551 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cx3cl1O35188 Rbm33-202ENSMUST00000059644 9510 ntAPPRIS P2 TSL 5 BASIC13.74□□□□□ -0.21
Cx3cl1O35188 Upk1a-201ENSMUST00000006476 1421 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Cx3cl1O35188 Slc16a9-201ENSMUST00000046807 3756 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Cx3cl1O35188 Ttll5-203ENSMUST00000095536 4150 ntAPPRIS ALT2 TSL 2 BASIC13.74□□□□□ -0.21
Cx3cl1O35188 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Cx3cl1O35188 Pycrl-201ENSMUST00000053918 1353 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Cx3cl1O35188 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Cx3cl1O35188 Tmem253-201ENSMUST00000100638 1234 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Cx3cl1O35188 Paxx-201ENSMUST00000114261 981 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Cx3cl1O35188 2410006H16Rik-201ENSMUST00000131787 462 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Cx3cl1O35188 Rprl2-201ENSMUST00000157150 290 ntBASIC13.74□□□□□ -0.21
Cx3cl1O35188 Med22-201ENSMUST00000015920 973 ntAPPRIS P4 TSL 2 BASIC13.74□□□□□ -0.21
Cx3cl1O35188 H2-Bl-211ENSMUST00000195838 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Cx3cl1O35188 Klrg2-202ENSMUST00000201345 1225 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
Cx3cl1O35188 Chchd1-203ENSMUST00000224633 557 ntBASIC13.74□□□□□ -0.21
Cx3cl1O35188 Lce1b-201ENSMUST00000029531 647 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Cx3cl1O35188 Eef1akmt2-201ENSMUST00000033257 1107 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Cx3cl1O35188 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Cx3cl1O35188 Gm10073-201ENSMUST00000073722 496 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
Cx3cl1O35188 Rplp1-201ENSMUST00000008036 499 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Cx3cl1O35188 Gm5105-201ENSMUST00000053318 1665 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Cx3cl1O35188 Psrc1-201ENSMUST00000090561 1686 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Cx3cl1O35188 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Cx3cl1O35188 Slc38a7-201ENSMUST00000040481 3333 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Cx3cl1O35188 Tle1-204ENSMUST00000102848 3660 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Cx3cl1O35188 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Cx3cl1O35188 Phldb1-212ENSMUST00000138356 5600 ntTSL 5 BASIC13.74□□□□□ -0.21
Cx3cl1O35188 Fdx1-202ENSMUST00000214013 2759 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Cx3cl1O35188 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Cx3cl1O35188 Fgfr1op-202ENSMUST00000097419 3505 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Cx3cl1O35188 Ispd-202ENSMUST00000220519 3122 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Cx3cl1O35188 Neurod2-201ENSMUST00000041685 3142 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Cx3cl1O35188 Nfe2l1-201ENSMUST00000081775 4654 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
Cx3cl1O35188 Map6-204ENSMUST00000127492 4920 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Cx3cl1O35188 Mdh2-201ENSMUST00000019323 1456 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Cx3cl1O35188 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Cx3cl1O35188 Gm13332-201ENSMUST00000120451 1398 ntBASIC13.73□□□□□ -0.21
Cx3cl1O35188 Wdtc1-202ENSMUST00000105906 4057 ntTSL 5 BASIC13.73□□□□□ -0.21
Cx3cl1O35188 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Cx3cl1O35188 Cyp2a5-201ENSMUST00000005685 2013 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Cx3cl1O35188 Mcc-202ENSMUST00000164666 3606 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Cx3cl1O35188 Cryzl1-201ENSMUST00000073466 1965 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Cx3cl1O35188 Gm20482-201ENSMUST00000172746 1644 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Cx3cl1O35188 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Cx3cl1O35188 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Cx3cl1O35188 Gm6973-201ENSMUST00000117080 721 ntBASIC13.73□□□□□ -0.21
Cx3cl1O35188 Trav13-3-201ENSMUST00000117226 336 ntBASIC13.73□□□□□ -0.21
Cx3cl1O35188 Gm13365-201ENSMUST00000121188 973 ntBASIC13.73□□□□□ -0.21
Cx3cl1O35188 Rasd2-201ENSMUST00000132133 1299 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Cx3cl1O35188 Gm20509-201ENSMUST00000174203 1016 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
Cx3cl1O35188 Gm18057-201ENSMUST00000208220 503 ntBASIC13.73□□□□□ -0.21
Cx3cl1O35188 Dmrt1-202ENSMUST00000087525 1130 ntTSL 5 BASIC13.73□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 38.7 ms