Protein–RNA interactions for Protein: O09113

Otp, Homeobox protein orthopedia, mousemouse

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
OtpO09113 Gm11750-201ENSMUST00000146016 583 ntTSL 5 BASIC13.07□□□□□ -0.32
OtpO09113 Hrh3-204ENSMUST00000165248 1224 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
OtpO09113 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
OtpO09113 Gm42670-201ENSMUST00000201816 1292 ntBASIC13.07□□□□□ -0.32
OtpO09113 Timm9-205ENSMUST00000221178 529 ntTSL 3 BASIC13.07□□□□□ -0.32
OtpO09113 Gm9925-201ENSMUST00000066583 483 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
OtpO09113 Pde7b-205ENSMUST00000169404 1697 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
OtpO09113 4930429P21Rik-202ENSMUST00000194547 2061 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
OtpO09113 Fam174a-202ENSMUST00000186780 3460 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
OtpO09113 Casc3-204ENSMUST00000169695 3741 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
OtpO09113 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
OtpO09113 Mtg2-201ENSMUST00000087563 1346 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
OtpO09113 Fgfr3-210ENSMUST00000169212 4245 ntAPPRIS P4 TSL 1 (best) BASIC13.07□□□□□ -0.32
OtpO09113 Gpr153-202ENSMUST00000105650 3838 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
OtpO09113 Gm12620-201ENSMUST00000119791 1986 ntBASIC13.07□□□□□ -0.32
OtpO09113 Gm12612-201ENSMUST00000140182 1986 ntBASIC13.07□□□□□ -0.32
OtpO09113 Psen2-201ENSMUST00000010753 2004 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
OtpO09113 F2r-201ENSMUST00000059193 3336 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
OtpO09113 Sorbs3-204ENSMUST00000227929 2460 ntBASIC13.06□□□□□ -0.32
OtpO09113 Tmem251-201ENSMUST00000057416 3367 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
OtpO09113 Mus81-202ENSMUST00000124334 2067 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
OtpO09113 AC013548.1-201ENSMUST00000228850 4738 ntAPPRIS P1 BASIC13.06□□□□□ -0.32
OtpO09113 Ada-201ENSMUST00000017841 1688 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
OtpO09113 Gm11738-201ENSMUST00000134069 2158 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
OtpO09113 Get4-202ENSMUST00000110878 1180 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
OtpO09113 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC13.06□□□□□ -0.32
OtpO09113 Gm9449-201ENSMUST00000207265 1011 ntBASIC13.06□□□□□ -0.32
OtpO09113 AC154222.1-201ENSMUST00000223882 475 ntBASIC13.06□□□□□ -0.32
OtpO09113 Treml1-204ENSMUST00000224001 1220 ntAPPRIS P2 BASIC13.06□□□□□ -0.32
OtpO09113 1700080E11Rik-201ENSMUST00000035180 883 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
OtpO09113 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
OtpO09113 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
OtpO09113 Col9a2-201ENSMUST00000030372 2924 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
OtpO09113 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
OtpO09113 Rtn4-201ENSMUST00000060992 1773 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
OtpO09113 Aldh1b1-201ENSMUST00000044384 2298 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
OtpO09113 Gm5366-201ENSMUST00000215494 1338 ntBASIC13.06□□□□□ -0.32
OtpO09113 Pprc1-202ENSMUST00000099392 3956 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
OtpO09113 Gli1-201ENSMUST00000026474 4057 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
OtpO09113 Sirt4-202ENSMUST00000112067 1645 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
OtpO09113 Gatm-201ENSMUST00000028624 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
OtpO09113 Dlgap3-201ENSMUST00000046659 3884 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
OtpO09113 Slc4a7-201ENSMUST00000057015 8132 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
OtpO09113 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
OtpO09113 Mok-202ENSMUST00000070565 1693 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
OtpO09113 Diaph1-202ENSMUST00000080033 4378 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
OtpO09113 Srgn-204ENSMUST00000160987 1727 ntAPPRIS P1 TSL 3 BASIC13.05□□□□□ -0.32
OtpO09113 Gbe1-207ENSMUST00000171132 3303 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
OtpO09113 Ly6h-207ENSMUST00000163116 2801 ntAPPRIS ALT1 TSL 2 BASIC13.05□□□□□ -0.32
OtpO09113 Mon1a-202ENSMUST00000191906 2821 ntTSL 2 BASIC13.05□□□□□ -0.32
OtpO09113 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
OtpO09113 Rnf168-201ENSMUST00000014218 3932 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
OtpO09113 Abr-205ENSMUST00000108408 3534 ntTSL 5 BASIC13.05□□□□□ -0.32
OtpO09113 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC13.05□□□□□ -0.32
OtpO09113 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
OtpO09113 Ccer2-201ENSMUST00000178767 1054 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
OtpO09113 Gm18195-201ENSMUST00000207604 706 ntBASIC13.05□□□□□ -0.32
OtpO09113 CT010506.4-201ENSMUST00000225457 351 ntBASIC13.05□□□□□ -0.32
OtpO09113 Col5a3-201ENSMUST00000004201 6119 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
OtpO09113 Rbbp9-201ENSMUST00000028915 2170 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
OtpO09113 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
OtpO09113 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
OtpO09113 Arpc1b-201ENSMUST00000085679 3105 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
OtpO09113 Zfp568-203ENSMUST00000148442 4005 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
OtpO09113 Zfp664-201ENSMUST00000111417 4092 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
OtpO09113 Daxx-201ENSMUST00000079421 2580 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
OtpO09113 Cep126-201ENSMUST00000037397 3819 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
OtpO09113 Ankhd1-214ENSMUST00000155329 8223 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
OtpO09113 Klf15-202ENSMUST00000113530 2374 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
OtpO09113 Dnajc6-205ENSMUST00000106933 5191 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
OtpO09113 Olfr718-ps1-203ENSMUST00000215102 4913 ntAPPRIS P5 TSL 5 BASIC13.04□□□□□ -0.32
OtpO09113 Cyp27a1-201ENSMUST00000027356 1892 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
OtpO09113 Fam189b-202ENSMUST00000117278 2593 ntTSL 5 BASIC13.04□□□□□ -0.32
OtpO09113 Pja1-205ENSMUST00000167246 2666 ntAPPRIS P4 TSL 1 (best) BASIC13.04□□□□□ -0.32
OtpO09113 2410002F23Rik-218ENSMUST00000188382 2301 ntAPPRIS P2 TSL 5 BASIC13.04□□□□□ -0.32
OtpO09113 Gm8281-202ENSMUST00000163719 1954 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
OtpO09113 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC13.04□□□□□ -0.32
OtpO09113 Tma7-203ENSMUST00000192801 386 ntTSL 3 BASIC13.04□□□□□ -0.32
OtpO09113 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC13.04□□□□□ -0.32
OtpO09113 Ilf2-201ENSMUST00000001042 2027 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
OtpO09113 Peli1-201ENSMUST00000093290 3514 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
OtpO09113 Gins2-201ENSMUST00000034278 3900 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
OtpO09113 Psmb10-201ENSMUST00000034369 1311 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
OtpO09113 Mdfic-203ENSMUST00000125326 3635 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
OtpO09113 Klhdc8b-207ENSMUST00000193286 2956 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
OtpO09113 Map7d1-201ENSMUST00000061143 3351 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
OtpO09113 Smpd3-202ENSMUST00000212896 2626 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
OtpO09113 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
OtpO09113 Arid3c-201ENSMUST00000084698 1417 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
OtpO09113 Tpd52-203ENSMUST00000091355 3081 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
OtpO09113 Rcn3-201ENSMUST00000019683 1462 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
OtpO09113 Rcn3-208ENSMUST00000211352 1453 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
OtpO09113 Hist1h1e-201ENSMUST00000062045 1930 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
OtpO09113 Kcng1-202ENSMUST00000109191 4089 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
OtpO09113 Ncln-202ENSMUST00000118498 2841 ntAPPRIS ALT1 TSL 5 BASIC13.03□□□□□ -0.32
OtpO09113 Slc18b1-206ENSMUST00000179321 2843 ntTSL 5 BASIC13.03□□□□□ -0.32
OtpO09113 Msh2-201ENSMUST00000024967 3283 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
OtpO09113 Tnfrsf11a-201ENSMUST00000027559 5027 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
OtpO09113 Cblb-204ENSMUST00000227062 3728 ntAPPRIS P2 BASIC13.03□□□□□ -0.32
OtpO09113 Wwp2-205ENSMUST00000212543 1996 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 64.8 ms