Protein–RNA interactions for Protein: O08811

Ercc2, General transcription and DNA repair factor IIH helicase subunit XPD, mousemouse

Known RBP Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ercc2O08811 Dnajc28-201ENSMUST00000049244 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Ercc2O08811 Prkab2-201ENSMUST00000045743 5006 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Ercc2O08811 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
Ercc2O08811 Klk6-202ENSMUST00000107967 1172 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Ercc2O08811 Gm11745-201ENSMUST00000121669 448 ntBASIC14.98□□□□□ -0.01
Ercc2O08811 Snu13-203ENSMUST00000166578 1061 ntTSL 2 BASIC14.98□□□□□ -0.01
Ercc2O08811 Thap4-205ENSMUST00000189728 713 ntTSL 2 BASIC14.98□□□□□ -0.01
Ercc2O08811 Klrg2-202ENSMUST00000201345 1225 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
Ercc2O08811 Gm45231-201ENSMUST00000208629 1064 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Ercc2O08811 9430081H08Rik-201ENSMUST00000217460 818 ntBASIC14.98□□□□□ -0.01
Ercc2O08811 Gm5628-201ENSMUST00000222318 1049 ntBASIC14.98□□□□□ -0.01
Ercc2O08811 Gnmt-201ENSMUST00000002846 1035 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Ercc2O08811 Tmem33-204ENSMUST00000161369 6164 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
Ercc2O08811 Rnf4-207ENSMUST00000182709 3046 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Ercc2O08811 Ap4b1-207ENSMUST00000200377 1823 ntTSL 5 BASIC14.98□□□□□ -0.01
Ercc2O08811 Kcnh1-202ENSMUST00000110844 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Ercc2O08811 Sbk2-205ENSMUST00000208109 1422 ntTSL 5 BASIC14.98□□□□□ -0.01
Ercc2O08811 Il9r-202ENSMUST00000128311 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Ercc2O08811 Fam3a-205ENSMUST00000114142 1586 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
Ercc2O08811 Gm5648-201ENSMUST00000122244 1587 ntBASIC14.98□□□□□ -0.01
Ercc2O08811 Vdac3-201ENSMUST00000009036 1354 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Ercc2O08811 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Ercc2O08811 Lgi3-201ENSMUST00000047331 3174 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Ercc2O08811 Tmem94-201ENSMUST00000093912 5329 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Ercc2O08811 P4ha2-215ENSMUST00000174616 2094 ntTSL 5 BASIC14.97□□□□□ -0.01
Ercc2O08811 Gm26840-201ENSMUST00000180784 2980 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Ercc2O08811 Ush1c-207ENSMUST00000176371 1865 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
Ercc2O08811 Gm9856-201ENSMUST00000217077 2578 ntBASIC14.97□□□□□ -0.01
Ercc2O08811 Coq10a-205ENSMUST00000220027 1307 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
Ercc2O08811 Fbxo25-201ENSMUST00000043520 2012 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
Ercc2O08811 Ism2-202ENSMUST00000125733 2526 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
Ercc2O08811 Zc3h13-203ENSMUST00000227049 6144 ntAPPRIS ALT2 BASIC14.97□□□□□ -0.01
Ercc2O08811 Ttc13-210ENSMUST00000214828 3301 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
Ercc2O08811 Gm11543-201ENSMUST00000120758 370 ntBASIC14.97□□□□□ -0.01
Ercc2O08811 Gm12017-201ENSMUST00000122453 1003 ntBASIC14.97□□□□□ -0.01
Ercc2O08811 Rps10-ps2-201ENSMUST00000127484 496 ntBASIC14.97□□□□□ -0.01
Ercc2O08811 Gm27494-201ENSMUST00000184735 189 ntBASIC14.97□□□□□ -0.01
Ercc2O08811 Gm45098-201ENSMUST00000207179 657 ntBASIC14.97□□□□□ -0.01
Ercc2O08811 Gm18057-201ENSMUST00000208220 503 ntBASIC14.97□□□□□ -0.01
Ercc2O08811 AC124549.3-201ENSMUST00000225541 367 ntBASIC14.97□□□□□ -0.01
Ercc2O08811 Gtpbp10-201ENSMUST00000088842 941 ntTSL 5 BASIC14.97□□□□□ -0.01
Ercc2O08811 Chdh-201ENSMUST00000067620 5690 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Ercc2O08811 Dot1l-201ENSMUST00000105336 6808 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Ercc2O08811 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Ercc2O08811 Gm16845-201ENSMUST00000180419 1415 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Ercc2O08811 Gm2109-201ENSMUST00000189326 1409 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Ercc2O08811 Abr-203ENSMUST00000094012 5236 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Ercc2O08811 Glis1-202ENSMUST00000106738 2744 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
Ercc2O08811 Cep170-205ENSMUST00000192961 2708 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Ercc2O08811 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC14.97□□□□□ -0.01
Ercc2O08811 6530402F18Rik-203ENSMUST00000155949 4301 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Ercc2O08811 Cacna2d3-201ENSMUST00000022567 3695 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Ercc2O08811 Syne3-201ENSMUST00000067005 5097 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Ercc2O08811 Pcdha5-201ENSMUST00000192168 5206 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Ercc2O08811 Rnf180-203ENSMUST00000224662 2734 ntAPPRIS ALT2 BASIC14.96□□□□□ -0.01
Ercc2O08811 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC14.96□□□□□ -0.01
Ercc2O08811 Miga1-202ENSMUST00000073089 4965 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Ercc2O08811 Iffo1-201ENSMUST00000117675 2833 ntAPPRIS P4 TSL 1 (best) BASIC14.96□□□□□ -0.01
Ercc2O08811 Npas3-204ENSMUST00000223358 3143 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Ercc2O08811 Aqp11-205ENSMUST00000206389 3737 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Ercc2O08811 Zfp316-202ENSMUST00000161448 6891 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Ercc2O08811 Nme1-202ENSMUST00000107844 452 ntTSL 3 BASIC14.96□□□□□ -0.01
Ercc2O08811 Uqcc2-203ENSMUST00000119227 452 ntTSL 3 BASIC14.96□□□□□ -0.01
Ercc2O08811 Gm23547-201ENSMUST00000158210 271 ntBASIC14.96□□□□□ -0.01
Ercc2O08811 Nfya-203ENSMUST00000159063 1255 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Ercc2O08811 Sirpa-213ENSMUST00000163034 677 ntTSL 3 BASIC14.96□□□□□ -0.01
Ercc2O08811 Gm24513-201ENSMUST00000174964 138 ntBASIC14.96□□□□□ -0.01
Ercc2O08811 Gm2213-201ENSMUST00000197485 688 ntBASIC14.96□□□□□ -0.01
Ercc2O08811 Trip6-203ENSMUST00000199121 366 ntTSL 3 BASIC14.96□□□□□ -0.01
Ercc2O08811 9230114J08Rik-201ENSMUST00000200375 350 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Ercc2O08811 AC166341.4-201ENSMUST00000220625 123 ntBASIC14.96□□□□□ -0.01
Ercc2O08811 Ptcd2-201ENSMUST00000022153 1704 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Ercc2O08811 Olfr324-201ENSMUST00000054683 1122 ntAPPRIS P2 BASIC14.96□□□□□ -0.01
Ercc2O08811 Rhot1-202ENSMUST00000055056 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Ercc2O08811 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
Ercc2O08811 Cpeb3-201ENSMUST00000079754 5899 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
Ercc2O08811 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Ercc2O08811 Klc1-203ENSMUST00000120544 2261 ntAPPRIS ALT1 TSL 5 BASIC14.96□□□□□ -0.01
Ercc2O08811 Unc93b1-204ENSMUST00000165711 1991 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
Ercc2O08811 Echdc1-202ENSMUST00000160399 1845 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Ercc2O08811 Acaa2-201ENSMUST00000041053 1515 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Ercc2O08811 Egfl7-212ENSMUST00000166920 1391 ntAPPRIS P4 TSL 1 (best) BASIC14.96□□□□□ -0.02
Ercc2O08811 Atp4b-201ENSMUST00000033826 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Ercc2O08811 Gigyf1-201ENSMUST00000031727 5440 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Ercc2O08811 Rad51-201ENSMUST00000028795 3368 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Ercc2O08811 Usp51-201ENSMUST00000095755 2204 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Ercc2O08811 Agpat1-202ENSMUST00000114140 1941 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Ercc2O08811 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.02
Ercc2O08811 AC162938.1-201ENSMUST00000213140 2323 ntBASIC14.95□□□□□ -0.02
Ercc2O08811 Sowaha-201ENSMUST00000104955 3702 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
Ercc2O08811 Fkbp10-202ENSMUST00000107400 1467 ntTSL 5 BASIC14.95□□□□□ -0.02
Ercc2O08811 Tmem59l-201ENSMUST00000045286 1491 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Ercc2O08811 Foxs1-201ENSMUST00000099200 1311 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
Ercc2O08811 Pycr1-201ENSMUST00000026133 1861 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Ercc2O08811 Tex44-201ENSMUST00000046004 1724 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
Ercc2O08811 Gm9932-201ENSMUST00000194154 2116 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Ercc2O08811 Zfp12-201ENSMUST00000032591 5265 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Ercc2O08811 Tjp2-201ENSMUST00000099558 4591 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Ercc2O08811 Cacna1g-201ENSMUST00000021234 8139 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
Ercc2O08811 St6gal2-201ENSMUST00000025000 6066 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 28 ms