Protein–RNA interactions for Protein: O08791

Ebf3, Transcription factor COE3, mousemouse

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf3O08791 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
Ebf3O08791 Nt5dc2-201ENSMUST00000090212 1407 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Ebf3O08791 Ppdpf-202ENSMUST00000108841 689 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ebf3O08791 Gm13453-201ENSMUST00000118708 357 ntBASIC15.21■□□□□ 0.03
Ebf3O08791 Gm15593-201ENSMUST00000122085 1008 ntBASIC15.21■□□□□ 0.03
Ebf3O08791 2810408I11Rik-202ENSMUST00000150749 711 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Ebf3O08791 Gm5866-201ENSMUST00000177881 973 ntBASIC15.21■□□□□ 0.03
Ebf3O08791 C330022C24Rik-201ENSMUST00000190581 1077 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Ebf3O08791 4930573H18Rik-201ENSMUST00000197696 906 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Ebf3O08791 Vmn2r-ps89-201ENSMUST00000209195 1010 ntBASIC15.21■□□□□ 0.03
Ebf3O08791 Gm6888-201ENSMUST00000221983 706 ntBASIC15.21■□□□□ 0.03
Ebf3O08791 Arhgef33-209ENSMUST00000225223 714 ntBASIC15.21■□□□□ 0.03
Ebf3O08791 Caly-201ENSMUST00000026541 1220 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ebf3O08791 Vps25-202ENSMUST00000042477 1106 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ebf3O08791 Gpbar1-201ENSMUST00000077985 1075 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
Ebf3O08791 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Ebf3O08791 Skor1-203ENSMUST00000119146 3610 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ebf3O08791 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ebf3O08791 9130024F11Rik-202ENSMUST00000185204 2628 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Ebf3O08791 Gm10010-201ENSMUST00000071101 2346 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
Ebf3O08791 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.02
Ebf3O08791 Ubc-203ENSMUST00000156249 2581 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.02
Ebf3O08791 Gm20482-201ENSMUST00000172746 1644 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
Ebf3O08791 AC131743.5-201ENSMUST00000220775 1618 ntBASIC15.21■□□□□ 0.02
Ebf3O08791 Tmem30b-201ENSMUST00000042975 2991 ntAPPRIS P1 BASIC15.21■□□□□ 0.02
Ebf3O08791 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Ebf3O08791 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Ebf3O08791 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ebf3O08791 Mccc2-201ENSMUST00000022148 2123 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ebf3O08791 Traf5-201ENSMUST00000085573 1964 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Ebf3O08791 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC15.2■□□□□ 0.02
Ebf3O08791 Klf15-203ENSMUST00000203039 2482 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Ebf3O08791 Bag6-202ENSMUST00000166426 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ebf3O08791 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ebf3O08791 Gcsh-201ENSMUST00000040484 1443 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ebf3O08791 D1Pas1-201ENSMUST00000045108 3212 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
Ebf3O08791 Hist1h2br-202ENSMUST00000110476 381 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
Ebf3O08791 Gm13015-201ENSMUST00000118674 204 ntBASIC15.2■□□□□ 0.02
Ebf3O08791 Gm14206-201ENSMUST00000132973 747 ntTSL 3 BASIC15.2■□□□□ 0.02
Ebf3O08791 Gm23547-201ENSMUST00000158210 271 ntBASIC15.2■□□□□ 0.02
Ebf3O08791 Cend1-204ENSMUST00000164387 1206 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ebf3O08791 Gm8116-201ENSMUST00000182917 1201 ntBASIC15.2■□□□□ 0.02
Ebf3O08791 Gm29541-201ENSMUST00000191351 678 ntBASIC15.2■□□□□ 0.02
Ebf3O08791 Ociad1-210ENSMUST00000202250 800 ntTSL 2 BASIC15.2■□□□□ 0.02
Ebf3O08791 Gm18049-201ENSMUST00000208909 581 ntBASIC15.2■□□□□ 0.02
Ebf3O08791 Rab33a-201ENSMUST00000033430 1158 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ebf3O08791 Hes5-201ENSMUST00000049621 1273 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ebf3O08791 Erp29-201ENSMUST00000052590 1123 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Ebf3O08791 Rhbdl2-201ENSMUST00000053202 1217 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Ebf3O08791 Tmod4-201ENSMUST00000005769 1242 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ebf3O08791 Ifng-201ENSMUST00000068592 1208 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ebf3O08791 Hist1h2bq-201ENSMUST00000078156 381 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
Ebf3O08791 Pdhb-201ENSMUST00000022268 1513 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ebf3O08791 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Ebf3O08791 Pdk1-201ENSMUST00000006669 5185 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ebf3O08791 Mcc-202ENSMUST00000164666 3606 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Ebf3O08791 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ebf3O08791 Serinc1-201ENSMUST00000020027 2880 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ebf3O08791 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
Ebf3O08791 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ebf3O08791 Galnt13-203ENSMUST00000112635 7531 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ebf3O08791 Slc27a5-202ENSMUST00000120903 1468 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Ebf3O08791 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ebf3O08791 B4galt2-203ENSMUST00000106421 1801 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ebf3O08791 Gtf2e2-201ENSMUST00000167264 1566 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Ebf3O08791 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Ebf3O08791 Slc16a6-202ENSMUST00000070152 4219 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
Ebf3O08791 Tmem199-201ENSMUST00000052566 1347 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Ebf3O08791 Tmod2-208ENSMUST00000215614 1921 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Ebf3O08791 Fbxo15-204ENSMUST00000224467 1908 ntAPPRIS ALT2 BASIC15.19■□□□□ 0.02
Ebf3O08791 Dpp7-201ENSMUST00000028332 1682 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Ebf3O08791 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Ebf3O08791 Dlat-201ENSMUST00000034567 4035 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Ebf3O08791 Poc1b-204ENSMUST00000159990 3449 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Ebf3O08791 Vav1-204ENSMUST00000169220 2810 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Ebf3O08791 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC15.19■□□□□ 0.02
Ebf3O08791 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
Ebf3O08791 0610010K14Rik-205ENSMUST00000108575 643 ntTSL 2 BASIC15.19■□□□□ 0.02
Ebf3O08791 Rpl9-202ENSMUST00000118543 1193 ntTSL 2 BASIC15.19■□□□□ 0.02
Ebf3O08791 Gm11773-201ENSMUST00000138256 497 ntTSL 2 BASIC15.19■□□□□ 0.02
Ebf3O08791 Gm16137-201ENSMUST00000161571 664 ntTSL 5 BASIC15.19■□□□□ 0.02
Ebf3O08791 Pkig-209ENSMUST00000164399 983 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
Ebf3O08791 Gm26854-201ENSMUST00000180418 705 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Ebf3O08791 Gm5745-201ENSMUST00000183748 313 ntBASIC15.19■□□□□ 0.02
Ebf3O08791 Mir8102-201ENSMUST00000184148 139 ntBASIC15.19■□□□□ 0.02
Ebf3O08791 Klk2-ps-201ENSMUST00000205342 571 ntBASIC15.19■□□□□ 0.02
Ebf3O08791 Ino80e-214ENSMUST00000206349 883 ntTSL 2 BASIC15.19■□□□□ 0.02
Ebf3O08791 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Ebf3O08791 Wdfy3-206ENSMUST00000174698 3858 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Ebf3O08791 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Ebf3O08791 Adam9-202ENSMUST00000084035 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Ebf3O08791 Cldn14-204ENSMUST00000169391 1456 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
Ebf3O08791 Prickle1-201ENSMUST00000048982 4085 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Ebf3O08791 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Ebf3O08791 Fbxo46-202ENSMUST00000165913 2498 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Ebf3O08791 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Ebf3O08791 Mis12-201ENSMUST00000048807 3003 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Ebf3O08791 Asb2-201ENSMUST00000021617 2690 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Ebf3O08791 AC159649.2-201ENSMUST00000222984 3223 ntBASIC15.19■□□□□ 0.02
Ebf3O08791 Nsun7-203ENSMUST00000201100 2775 ntAPPRIS P3 TSL 5 BASIC15.19■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 51.4 ms