Protein–RNA interactions for Protein: J3QNX5

Shisa8, Cysteine-knot AMPAR-modulating protein 39, mousemouse

Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shisa8J3QNX5 Slc19a2-202ENSMUST00000159230 3432 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Shisa8J3QNX5 Olfr1411-202ENSMUST00000190844 1821 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Shisa8J3QNX5 Lzts1-201ENSMUST00000037049 1800 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Shisa8J3QNX5 Rbbp5-206ENSMUST00000190825 2456 ntAPPRIS ALT1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Shisa8J3QNX5 Gata2-202ENSMUST00000170089 3135 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Shisa8J3QNX5 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Shisa8J3QNX5 Atp6v0d1-201ENSMUST00000013304 1629 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Shisa8J3QNX5 Stxbp2-207ENSMUST00000160708 2908 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Shisa8J3QNX5 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Shisa8J3QNX5 Fbxw7-204ENSMUST00000107679 4473 ntAPPRIS ALT1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Shisa8J3QNX5 Adamts15-201ENSMUST00000065112 5928 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Shisa8J3QNX5 4632428C04Rik-201ENSMUST00000181485 2430 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Shisa8J3QNX5 Cyp27a1-201ENSMUST00000027356 1892 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Shisa8J3QNX5 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Shisa8J3QNX5 P4hb-201ENSMUST00000026122 2861 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Shisa8J3QNX5 Aqp3-201ENSMUST00000055327 1765 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Shisa8J3QNX5 Slfnl1-201ENSMUST00000062990 1762 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Shisa8J3QNX5 Pcdh7-202ENSMUST00000094783 3752 ntAPPRIS ALT1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Shisa8J3QNX5 Sufu-203ENSMUST00000118440 2663 ntTSL 5 BASIC13.37□□□□□ -0.27
Shisa8J3QNX5 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC13.37□□□□□ -0.27
Shisa8J3QNX5 Arhgef5-201ENSMUST00000031750 5469 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Shisa8J3QNX5 Mfrp-205ENSMUST00000206308 4037 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Shisa8J3QNX5 Tfe3-211ENSMUST00000137467 3390 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Shisa8J3QNX5 Tmem251-201ENSMUST00000057416 3367 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Shisa8J3QNX5 Ppp1r15b-201ENSMUST00000052529 5594 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Shisa8J3QNX5 5730559C18Rik-201ENSMUST00000120339 2988 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Shisa8J3QNX5 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Shisa8J3QNX5 Elf4-202ENSMUST00000114958 6088 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Shisa8J3QNX5 Zfyve27-207ENSMUST00000169536 5611 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Shisa8J3QNX5 Zbtb46-201ENSMUST00000029106 5309 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Shisa8J3QNX5 Rasgrp2-205ENSMUST00000113471 535 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Shisa8J3QNX5 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Shisa8J3QNX5 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Shisa8J3QNX5 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Shisa8J3QNX5 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Shisa8J3QNX5 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Shisa8J3QNX5 Olfr632-201ENSMUST00000098189 954 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
Shisa8J3QNX5 Nacad-201ENSMUST00000045713 4892 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Shisa8J3QNX5 Cobl-208ENSMUST00000172919 2566 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Shisa8J3QNX5 Clcc1-201ENSMUST00000029483 2224 ntAPPRIS P3 TSL 5 BASIC13.37□□□□□ -0.27
Shisa8J3QNX5 Lypd1-205ENSMUST00000162899 1511 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Shisa8J3QNX5 4921513I03Rik-201ENSMUST00000056994 1534 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Shisa8J3QNX5 Sgce-202ENSMUST00000090686 1547 ntTSL 5 BASIC13.37□□□□□ -0.27
Shisa8J3QNX5 Pgr-201ENSMUST00000070463 3068 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Shisa8J3QNX5 Pgr-202ENSMUST00000098986 3068 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Shisa8J3QNX5 Tmem81-202ENSMUST00000188789 1751 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
Shisa8J3QNX5 Hps5-201ENSMUST00000014562 4953 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Shisa8J3QNX5 Mybl1-201ENSMUST00000088658 4980 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Shisa8J3QNX5 Cacnb4-201ENSMUST00000078324 8225 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Shisa8J3QNX5 Rnf10-203ENSMUST00000112097 3476 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Shisa8J3QNX5 Aste1-201ENSMUST00000035181 2755 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Shisa8J3QNX5 Keap1-202ENSMUST00000164812 3614 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Shisa8J3QNX5 Mfsd3-201ENSMUST00000019224 2169 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Shisa8J3QNX5 Phactr3-203ENSMUST00000108915 2694 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Shisa8J3QNX5 Phactr3-204ENSMUST00000108916 2656 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Shisa8J3QNX5 Wwc2-201ENSMUST00000057561 8678 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Shisa8J3QNX5 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC13.36□□□□□ -0.27
Shisa8J3QNX5 Cdk8-205ENSMUST00000161181 2467 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Shisa8J3QNX5 Nfe2l1-204ENSMUST00000107659 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Shisa8J3QNX5 Dnase1l2-202ENSMUST00000119932 1629 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Shisa8J3QNX5 Gm42471-201ENSMUST00000201457 1865 ntBASIC13.36□□□□□ -0.27
Shisa8J3QNX5 Plxnb1-201ENSMUST00000072093 8649 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Shisa8J3QNX5 Nyap1-201ENSMUST00000061789 3912 ntAPPRIS P3 TSL 5 BASIC13.36□□□□□ -0.27
Shisa8J3QNX5 Myh14-202ENSMUST00000107899 6390 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Shisa8J3QNX5 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC13.36□□□□□ -0.27
Shisa8J3QNX5 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Shisa8J3QNX5 1700021A07Rik-203ENSMUST00000188024 404 ntTSL 3 BASIC13.36□□□□□ -0.27
Shisa8J3QNX5 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC13.36□□□□□ -0.27
Shisa8J3QNX5 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Shisa8J3QNX5 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC13.36□□□□□ -0.27
Shisa8J3QNX5 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC13.36□□□□□ -0.27
Shisa8J3QNX5 AC154471.1-201ENSMUST00000224418 436 ntBASIC13.36□□□□□ -0.27
Shisa8J3QNX5 AC121577.1-201ENSMUST00000227302 707 ntBASIC13.36□□□□□ -0.27
Shisa8J3QNX5 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC13.36□□□□□ -0.27
Shisa8J3QNX5 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Shisa8J3QNX5 Rnf123-214ENSMUST00000162355 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Shisa8J3QNX5 Rest-202ENSMUST00000113449 6924 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Shisa8J3QNX5 Myl12a-206ENSMUST00000148960 1937 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Shisa8J3QNX5 Pdia2-202ENSMUST00000120333 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Shisa8J3QNX5 Mindy3-201ENSMUST00000028105 2344 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Shisa8J3QNX5 Kctd14-201ENSMUST00000050732 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Shisa8J3QNX5 Kcnq2-220ENSMUST00000197015 8031 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Shisa8J3QNX5 Hspa12b-201ENSMUST00000099349 3413 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Shisa8J3QNX5 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC13.36□□□□□ -0.27
Shisa8J3QNX5 Wdr73-201ENSMUST00000026816 2114 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Shisa8J3QNX5 Pnkd-201ENSMUST00000027370 2937 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Shisa8J3QNX5 Cacna2d2-204ENSMUST00000166799 3474 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Shisa8J3QNX5 Prkg1-202ENSMUST00000073581 2841 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Shisa8J3QNX5 Syngr1-201ENSMUST00000009727 4180 ntAPPRIS P4 TSL 1 (best) BASIC13.35□□□□□ -0.27
Shisa8J3QNX5 Srrm1-203ENSMUST00000105861 3797 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
Shisa8J3QNX5 Gm15850-201ENSMUST00000134998 2049 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Shisa8J3QNX5 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Shisa8J3QNX5 Celf4-207ENSMUST00000225477 2626 ntAPPRIS P3 BASIC13.35□□□□□ -0.27
Shisa8J3QNX5 Ddx42-201ENSMUST00000021046 4011 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Shisa8J3QNX5 Erfe-201ENSMUST00000086861 2815 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Shisa8J3QNX5 Gm43570-201ENSMUST00000199951 3688 ntBASIC13.35□□□□□ -0.27
Shisa8J3QNX5 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Shisa8J3QNX5 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
Shisa8J3QNX5 Peli3-202ENSMUST00000120475 2988 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Shisa8J3QNX5 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC13.35□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 43.4 ms