Protein–RNA interactions for Protein: J3QNE4

Ccdc180, Coiled-coil domain-containing 180, mousemouse

Predictions only

Length 1,664 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc180J3QNE4 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC26.31■■□□□ 1.8
Ccdc180J3QNE4 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC26.31■■□□□ 1.8
Ccdc180J3QNE4 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
Ccdc180J3QNE4 Prelid1-201ENSMUST00000021942 2644 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
Ccdc180J3QNE4 Gm4984-201ENSMUST00000115987 360 ntBASIC26.31■■□□□ 1.8
Ccdc180J3QNE4 Gm21470-201ENSMUST00000187680 696 ntBASIC26.31■■□□□ 1.8
Ccdc180J3QNE4 Gm4971-201ENSMUST00000205991 1108 ntBASIC26.31■■□□□ 1.8
Ccdc180J3QNE4 Crybb2-201ENSMUST00000031295 724 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
Ccdc180J3QNE4 Pkp2-201ENSMUST00000039408 2918 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
Ccdc180J3QNE4 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
Ccdc180J3QNE4 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
Ccdc180J3QNE4 Foxo3-201ENSMUST00000056974 2889 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
Ccdc180J3QNE4 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
Ccdc180J3QNE4 Sgce-207ENSMUST00000126151 1522 ntTSL 5 BASIC26.3■■□□□ 1.8
Ccdc180J3QNE4 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC26.3■■□□□ 1.8
Ccdc180J3QNE4 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC26.3■■□□□ 1.8
Ccdc180J3QNE4 Fbxo46-202ENSMUST00000165913 2498 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
Ccdc180J3QNE4 Sem1-201ENSMUST00000041111 1472 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
Ccdc180J3QNE4 Hus1b-201ENSMUST00000102943 1187 ntAPPRIS P1 BASIC26.3■■□□□ 1.8
Ccdc180J3QNE4 Gm24196-201ENSMUST00000179161 110 ntBASIC26.3■■□□□ 1.8
Ccdc180J3QNE4 Gm28198-201ENSMUST00000190938 471 ntTSL 3 BASIC26.3■■□□□ 1.8
Ccdc180J3QNE4 Gm43630-201ENSMUST00000201550 776 ntBASIC26.3■■□□□ 1.8
Ccdc180J3QNE4 Aaed1-207ENSMUST00000222570 3011 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
Ccdc180J3QNE4 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
Ccdc180J3QNE4 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC26.3■■□□□ 1.8
Ccdc180J3QNE4 Zfp707-201ENSMUST00000109966 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC26.3■■□□□ 1.8
Ccdc180J3QNE4 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC26.3■■□□□ 1.8
Ccdc180J3QNE4 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC26.3■■□□□ 1.8
Ccdc180J3QNE4 Sphk1-205ENSMUST00000106387 1957 ntAPPRIS ALT2 TSL 5 BASIC26.3■■□□□ 1.8
Ccdc180J3QNE4 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC26.29■■□□□ 1.8
Ccdc180J3QNE4 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
Ccdc180J3QNE4 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC26.29■■□□□ 1.8
Ccdc180J3QNE4 Ift20-203ENSMUST00000128788 1141 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
Ccdc180J3QNE4 3000002C10Rik-202ENSMUST00000133495 1008 ntBASIC26.29■■□□□ 1.8
Ccdc180J3QNE4 Gm19078-201ENSMUST00000206311 727 ntBASIC26.29■■□□□ 1.8
Ccdc180J3QNE4 Ndufs6-201ENSMUST00000022097 568 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
Ccdc180J3QNE4 Nat6-201ENSMUST00000093785 2053 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
Ccdc180J3QNE4 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC26.29■■□□□ 1.8
Ccdc180J3QNE4 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC26.29■■□□□ 1.8
Ccdc180J3QNE4 Ccnc-203ENSMUST00000108240 1406 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
Ccdc180J3QNE4 Prok2-202ENSMUST00000032152 1423 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
Ccdc180J3QNE4 Gm11978-202ENSMUST00000127510 1303 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
Ccdc180J3QNE4 1110028F18Rik-201ENSMUST00000183365 1341 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
Ccdc180J3QNE4 D830030K20Rik-201ENSMUST00000112797 1695 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
Ccdc180J3QNE4 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC26.29■■□□□ 1.8
Ccdc180J3QNE4 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
Ccdc180J3QNE4 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC26.29■■□□□ 1.8
Ccdc180J3QNE4 Rxra-202ENSMUST00000100251 1952 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
Ccdc180J3QNE4 Zfp639-205ENSMUST00000193287 2211 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
Ccdc180J3QNE4 Ggnbp2-211ENSMUST00000168434 3056 ntAPPRIS ALT1 TSL 5 BASIC26.28■■□□□ 1.8
Ccdc180J3QNE4 Gatd1-201ENSMUST00000106008 1898 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
Ccdc180J3QNE4 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
Ccdc180J3QNE4 Rpl18-208ENSMUST00000211061 552 ntTSL 5 BASIC26.28■■□□□ 1.8
Ccdc180J3QNE4 Tex13c3-201ENSMUST00000089246 876 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
Ccdc180J3QNE4 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC26.28■■□□□ 1.8
Ccdc180J3QNE4 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC26.28■■□□□ 1.8
Ccdc180J3QNE4 Gm11732-201ENSMUST00000151381 1742 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
Ccdc180J3QNE4 Tppp3-203ENSMUST00000177126 1396 ntAPPRIS P1 TSL 3 BASIC26.28■■□□□ 1.8
Ccdc180J3QNE4 Chit1-201ENSMUST00000086475 1688 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
Ccdc180J3QNE4 Shf-202ENSMUST00000110530 910 ntAPPRIS ALT2 TSL 5 BASIC26.28■■□□□ 1.8
Ccdc180J3QNE4 Ankzf1-201ENSMUST00000127625 1167 ntTSL 5 BASIC26.28■■□□□ 1.8
Ccdc180J3QNE4 Dhrs2-202ENSMUST00000165432 849 ntAPPRIS P1 TSL 5 BASIC26.28■■□□□ 1.8
Ccdc180J3QNE4 Rps19-ps13-201ENSMUST00000180504 441 ntBASIC26.28■■□□□ 1.8
Ccdc180J3QNE4 Gm31728-201ENSMUST00000192164 435 ntTSL 3 BASIC26.28■■□□□ 1.8
Ccdc180J3QNE4 Fau-201ENSMUST00000043074 574 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
Ccdc180J3QNE4 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC26.28■■□□□ 1.8
Ccdc180J3QNE4 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
Ccdc180J3QNE4 Mief1-202ENSMUST00000166030 2712 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
Ccdc180J3QNE4 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC26.27■■□□□ 1.8
Ccdc180J3QNE4 Slc24a3-201ENSMUST00000081121 1788 ntAPPRIS P2 TSL 5 BASIC26.27■■□□□ 1.8
Ccdc180J3QNE4 Akap1-201ENSMUST00000018572 3758 ntAPPRIS P2 TSL 1 (best) BASIC26.27■■□□□ 1.8
Ccdc180J3QNE4 Mpl-203ENSMUST00000106375 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC26.27■■□□□ 1.8
Ccdc180J3QNE4 Hist1h3h-201ENSMUST00000188775 411 ntAPPRIS P1 BASIC26.27■■□□□ 1.8
Ccdc180J3QNE4 Hist1h3i-201ENSMUST00000189457 411 ntAPPRIS P1 BASIC26.27■■□□□ 1.8
Ccdc180J3QNE4 Ighv8-14-201ENSMUST00000196781 358 ntBASIC26.27■■□□□ 1.8
Ccdc180J3QNE4 Zyx-207ENSMUST00000203652 2605 ntAPPRIS P3 TSL 1 (best) BASIC26.27■■□□□ 1.8
Ccdc180J3QNE4 Gm40493-201ENSMUST00000210223 400 ntTSL 3 BASIC26.27■■□□□ 1.8
Ccdc180J3QNE4 Clec4g-201ENSMUST00000058040 1441 ntTSL 5 BASIC26.27■■□□□ 1.8
Ccdc180J3QNE4 Dmrtc2-201ENSMUST00000011493 1619 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
Ccdc180J3QNE4 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC26.27■■□□□ 1.8
Ccdc180J3QNE4 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
Ccdc180J3QNE4 Nat8f4-202ENSMUST00000159755 1129 ntTSL 2 BASIC26.26■■□□□ 1.79
Ccdc180J3QNE4 AC155258.1-201ENSMUST00000219303 253 ntBASIC26.26■■□□□ 1.79
Ccdc180J3QNE4 Rit1-201ENSMUST00000029692 1204 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
Ccdc180J3QNE4 Mpp4-201ENSMUST00000066374 2344 ntAPPRIS ALT2 TSL 5 BASIC26.26■■□□□ 1.79
Ccdc180J3QNE4 Mpp4-202ENSMUST00000078874 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC26.26■■□□□ 1.79
Ccdc180J3QNE4 AC166574.6-201ENSMUST00000227889 1806 ntBASIC26.26■■□□□ 1.79
Ccdc180J3QNE4 Prss44-201ENSMUST00000098345 1838 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
Ccdc180J3QNE4 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
Ccdc180J3QNE4 Slc25a22-201ENSMUST00000019226 2811 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
Ccdc180J3QNE4 Erlec1-201ENSMUST00000073192 2532 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
Ccdc180J3QNE4 Gm14780-201ENSMUST00000118387 2737 ntBASIC26.26■■□□□ 1.79
Ccdc180J3QNE4 Opn5-201ENSMUST00000068355 1824 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
Ccdc180J3QNE4 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
Ccdc180J3QNE4 Mif4gd-202ENSMUST00000106506 993 ntTSL 3 BASIC26.25■■□□□ 1.79
Ccdc180J3QNE4 Mup-ps23-201ENSMUST00000118063 630 ntBASIC26.25■■□□□ 1.79
Ccdc180J3QNE4 Snap47-202ENSMUST00000120940 1192 ntAPPRIS ALT2 TSL 1 (best) BASIC26.25■■□□□ 1.79
Ccdc180J3QNE4 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
Ccdc180J3QNE4 Hdac8-201ENSMUST00000087916 1936 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
Ccdc180J3QNE4 Cfap157-201ENSMUST00000102813 1730 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
Retrieved 100 of 76,532 protein–RNA pairs in 27.7 ms