Protein–RNA interactions for Protein: F8VQB8

Npcd, Neuronal pentraxin chromo domain, mousemouse

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NpcdF8VQB8 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
NpcdF8VQB8 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
NpcdF8VQB8 Ccdc166-201ENSMUST00000182172 2584 ntBASIC17.56■□□□□ 0.4
NpcdF8VQB8 Galnt18-202ENSMUST00000106663 2530 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
NpcdF8VQB8 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
NpcdF8VQB8 Sdk1-202ENSMUST00000085774 10352 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
NpcdF8VQB8 Acrbp-205ENSMUST00000112414 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
NpcdF8VQB8 Smpd1-201ENSMUST00000046983 2412 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
NpcdF8VQB8 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
NpcdF8VQB8 Hsd3b7-202ENSMUST00000106271 1713 ntTSL 5 BASIC17.55■□□□□ 0.4
NpcdF8VQB8 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
NpcdF8VQB8 Flt1-202ENSMUST00000031653 6895 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
NpcdF8VQB8 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC17.55■□□□□ 0.4
NpcdF8VQB8 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
NpcdF8VQB8 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC17.55■□□□□ 0.4
NpcdF8VQB8 Cyp2d10-201ENSMUST00000072776 1647 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
NpcdF8VQB8 4933415J04Rik-201ENSMUST00000195895 1301 ntBASIC17.55■□□□□ 0.4
NpcdF8VQB8 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC17.55■□□□□ 0.4
NpcdF8VQB8 Hs3st5-203ENSMUST00000168572 2715 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
NpcdF8VQB8 Kat8-201ENSMUST00000033070 1579 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
NpcdF8VQB8 Tssc4-202ENSMUST00000105920 895 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
NpcdF8VQB8 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
NpcdF8VQB8 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
NpcdF8VQB8 Shisa5-203ENSMUST00000154184 1038 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
NpcdF8VQB8 Spag7-201ENSMUST00000018431 1159 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
NpcdF8VQB8 Gm29585-201ENSMUST00000185270 514 ntTSL 5 BASIC17.55■□□□□ 0.4
NpcdF8VQB8 Tcta-203ENSMUST00000195615 597 ntTSL 5 BASIC17.55■□□□□ 0.4
NpcdF8VQB8 Gm42846-201ENSMUST00000201771 514 ntTSL 3 BASIC17.55■□□□□ 0.4
NpcdF8VQB8 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
NpcdF8VQB8 Zic4-209ENSMUST00000173933 1764 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
NpcdF8VQB8 Myg1-202ENSMUST00000113682 1480 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
NpcdF8VQB8 Fzd10-201ENSMUST00000117102 3250 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
NpcdF8VQB8 Vps51-201ENSMUST00000025711 2489 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
NpcdF8VQB8 Dusp23-201ENSMUST00000027826 1410 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
NpcdF8VQB8 8430429K09Rik-204ENSMUST00000146456 1675 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
NpcdF8VQB8 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
NpcdF8VQB8 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC17.54■□□□□ 0.4
NpcdF8VQB8 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
NpcdF8VQB8 Dixdc1-202ENSMUST00000117093 1613 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
NpcdF8VQB8 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC17.54■□□□□ 0.4
NpcdF8VQB8 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
NpcdF8VQB8 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
NpcdF8VQB8 Ruvbl2-205ENSMUST00000211214 2312 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
NpcdF8VQB8 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
NpcdF8VQB8 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
NpcdF8VQB8 Snrpa-202ENSMUST00000122202 1336 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
NpcdF8VQB8 3110082I17Rik-204ENSMUST00000198474 2030 ntTSL 2 BASIC17.54■□□□□ 0.4
NpcdF8VQB8 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
NpcdF8VQB8 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
NpcdF8VQB8 Gm13392-201ENSMUST00000117708 150 ntBASIC17.54■□□□□ 0.4
NpcdF8VQB8 Snhg9-201ENSMUST00000161706 183 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
NpcdF8VQB8 Sar1b-201ENSMUST00000020653 1201 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
NpcdF8VQB8 AC164567.1-201ENSMUST00000219185 960 ntBASIC17.54■□□□□ 0.4
NpcdF8VQB8 AC150560.1-201ENSMUST00000227731 1187 ntBASIC17.54■□□□□ 0.4
NpcdF8VQB8 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC17.54■□□□□ 0.4
NpcdF8VQB8 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
NpcdF8VQB8 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
NpcdF8VQB8 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
NpcdF8VQB8 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
NpcdF8VQB8 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
NpcdF8VQB8 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
NpcdF8VQB8 Ipo8-201ENSMUST00000048418 5360 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
NpcdF8VQB8 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
NpcdF8VQB8 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC17.54■□□□□ 0.4
NpcdF8VQB8 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC17.53■□□□□ 0.4
NpcdF8VQB8 Capg-203ENSMUST00000114072 1388 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
NpcdF8VQB8 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
NpcdF8VQB8 Fam83h-202ENSMUST00000170153 4534 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
NpcdF8VQB8 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
NpcdF8VQB8 Adamts17-202ENSMUST00000107478 6416 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
NpcdF8VQB8 Zc3hc1-210ENSMUST00000152391 1673 ntTSL 5 BASIC17.53■□□□□ 0.4
NpcdF8VQB8 Tpd52l2-203ENSMUST00000108799 985 ntTSL 5 BASIC17.53■□□□□ 0.4
NpcdF8VQB8 1700001C02Rik-203ENSMUST00000127815 660 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
NpcdF8VQB8 Gm13185-201ENSMUST00000131044 944 ntTSL 3 BASIC17.53■□□□□ 0.4
NpcdF8VQB8 Hoxd8-203ENSMUST00000151380 557 ntAPPRIS ALT2 TSL 2 BASIC17.53■□□□□ 0.4
NpcdF8VQB8 Pax8-208ENSMUST00000153601 1226 ntTSL 5 BASIC17.53■□□□□ 0.4
NpcdF8VQB8 Ccdc24-209ENSMUST00000171052 891 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
NpcdF8VQB8 Gm5354-201ENSMUST00000182417 973 ntBASIC17.53■□□□□ 0.4
NpcdF8VQB8 Mrpl30-205ENSMUST00000193673 662 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
NpcdF8VQB8 Gm42693-201ENSMUST00000196779 631 ntBASIC17.53■□□□□ 0.4
NpcdF8VQB8 Zfp936-202ENSMUST00000200973 578 ntTSL 3 BASIC17.53■□□□□ 0.4
NpcdF8VQB8 Olfr373-201ENSMUST00000074540 945 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
NpcdF8VQB8 Lrrc7-204ENSMUST00000199890 6326 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
NpcdF8VQB8 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
NpcdF8VQB8 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
NpcdF8VQB8 Gm2885-201ENSMUST00000181895 1442 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
NpcdF8VQB8 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
NpcdF8VQB8 Kcnj6-202ENSMUST00000099508 3086 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
NpcdF8VQB8 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
NpcdF8VQB8 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
NpcdF8VQB8 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
NpcdF8VQB8 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
NpcdF8VQB8 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
NpcdF8VQB8 Gm34419-201ENSMUST00000211383 1387 ntTSL 5 BASIC17.53■□□□□ 0.4
NpcdF8VQB8 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
NpcdF8VQB8 A530083I20Rik-203ENSMUST00000214426 1855 ntTSL 5 BASIC17.52■□□□□ 0.4
NpcdF8VQB8 Narfl-201ENSMUST00000002350 2555 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
NpcdF8VQB8 Eif4g3-205ENSMUST00000105831 6235 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
NpcdF8VQB8 Tpcn1-201ENSMUST00000046426 4712 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
NpcdF8VQB8 3110009E18Rik-203ENSMUST00000112644 488 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 32.3 ms