Protein–RNA interactions for Protein: F6V035

Ccdc149, Coiled-coil domain-containing 149, mousemouse

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc149F6V035 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ccdc149F6V035 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ccdc149F6V035 Arl5b-202ENSMUST00000069870 6981 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ccdc149F6V035 Csnk1e-202ENSMUST00000120859 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ccdc149F6V035 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ccdc149F6V035 Pcdh20-201ENSMUST00000061628 5241 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ccdc149F6V035 Klhdc4-210ENSMUST00000174717 1662 ntTSL 5 BASIC14.84□□□□□ -0.03
Ccdc149F6V035 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
Ccdc149F6V035 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ccdc149F6V035 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Ccdc149F6V035 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ccdc149F6V035 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Ccdc149F6V035 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ccdc149F6V035 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ccdc149F6V035 Cacng2-201ENSMUST00000019290 5510 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ccdc149F6V035 Bcat2-202ENSMUST00000120864 1536 ntTSL 5 BASIC14.84□□□□□ -0.03
Ccdc149F6V035 Gm15653-201ENSMUST00000119247 907 ntBASIC14.84□□□□□ -0.03
Ccdc149F6V035 1010001B22Rik-201ENSMUST00000181488 589 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Ccdc149F6V035 Gm26808-201ENSMUST00000181569 411 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Ccdc149F6V035 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ccdc149F6V035 Tmem204-201ENSMUST00000024984 1846 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ccdc149F6V035 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ccdc149F6V035 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ccdc149F6V035 Efhd1-201ENSMUST00000027472 1854 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ccdc149F6V035 Fam214b-204ENSMUST00000107958 3280 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ccdc149F6V035 Tle1-203ENSMUST00000074216 4369 ntAPPRIS ALT1 TSL 5 BASIC14.84□□□□□ -0.03
Ccdc149F6V035 Trnt1-203ENSMUST00000113248 1398 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ccdc149F6V035 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ccdc149F6V035 Gmpr2-201ENSMUST00000002397 1993 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ccdc149F6V035 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ccdc149F6V035 Nt5c3b-205ENSMUST00000107399 1427 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
Ccdc149F6V035 Disp2-204ENSMUST00000110846 1732 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
Ccdc149F6V035 Ydjc-202ENSMUST00000115702 1713 ntTSL 5 BASIC14.83□□□□□ -0.03
Ccdc149F6V035 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC14.83□□□□□ -0.03
Ccdc149F6V035 Gas2l2-201ENSMUST00000052521 2610 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Ccdc149F6V035 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.03
Ccdc149F6V035 Med20-201ENSMUST00000024778 2054 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Ccdc149F6V035 Mbtps2-201ENSMUST00000058098 4797 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
Ccdc149F6V035 Fhod3-201ENSMUST00000037097 5408 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Ccdc149F6V035 Adam11-201ENSMUST00000068150 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Ccdc149F6V035 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Ccdc149F6V035 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Ccdc149F6V035 Krt42-201ENSMUST00000017270 1542 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Ccdc149F6V035 Pdgfrl-201ENSMUST00000034004 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Ccdc149F6V035 Acss3-201ENSMUST00000044668 2494 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Ccdc149F6V035 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Ccdc149F6V035 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC14.83□□□□□ -0.04
Ccdc149F6V035 Kif16bos-201ENSMUST00000124774 495 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Ccdc149F6V035 Gm11535-201ENSMUST00000145517 778 ntTSL 3 BASIC14.83□□□□□ -0.04
Ccdc149F6V035 Gm7775-201ENSMUST00000218871 853 ntBASIC14.83□□□□□ -0.04
Ccdc149F6V035 Shd-206ENSMUST00000225145 998 ntBASIC14.83□□□□□ -0.04
Ccdc149F6V035 H2bfm-201ENSMUST00000059808 1052 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
Ccdc149F6V035 Cenpm-201ENSMUST00000089155 1109 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Ccdc149F6V035 Fbxo41-201ENSMUST00000159062 6505 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Ccdc149F6V035 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Ccdc149F6V035 Tfap2a-203ENSMUST00000223869 2037 ntBASIC14.83□□□□□ -0.04
Ccdc149F6V035 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Ccdc149F6V035 Gm43352-201ENSMUST00000196419 3065 ntBASIC14.83□□□□□ -0.04
Ccdc149F6V035 Cyp4f18-201ENSMUST00000003574 1702 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Ccdc149F6V035 Rhcg-201ENSMUST00000032766 2090 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Ccdc149F6V035 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Ccdc149F6V035 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Ccdc149F6V035 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Ccdc149F6V035 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Ccdc149F6V035 Asl-205ENSMUST00000161094 1824 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ccdc149F6V035 Gm39244-202ENSMUST00000210837 1857 ntTSL 5 BASIC14.82□□□□□ -0.04
Ccdc149F6V035 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ccdc149F6V035 Tpgs2-202ENSMUST00000148255 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ccdc149F6V035 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ccdc149F6V035 Gm10564-201ENSMUST00000097750 3113 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Ccdc149F6V035 Elk4-201ENSMUST00000027696 1586 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ccdc149F6V035 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Ccdc149F6V035 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ccdc149F6V035 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ccdc149F6V035 Gm8334-201ENSMUST00000112755 1662 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
Ccdc149F6V035 B9d1-201ENSMUST00000102657 817 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ccdc149F6V035 Hist1h2br-202ENSMUST00000110476 381 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
Ccdc149F6V035 Dancr-202ENSMUST00000120364 575 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Ccdc149F6V035 Tpt1-ps6-201ENSMUST00000121768 523 ntBASIC14.82□□□□□ -0.04
Ccdc149F6V035 4930417O22Rik-201ENSMUST00000123249 1184 ntTSL 2 BASIC14.82□□□□□ -0.04
Ccdc149F6V035 Gm23547-201ENSMUST00000158210 271 ntBASIC14.82□□□□□ -0.04
Ccdc149F6V035 Pfdn5-205ENSMUST00000166658 1062 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ccdc149F6V035 Gm27838-201ENSMUST00000184829 128 ntBASIC14.82□□□□□ -0.04
Ccdc149F6V035 Kansl3-206ENSMUST00000187628 336 ntTSL 5 BASIC14.82□□□□□ -0.04
Ccdc149F6V035 Gm42787-201ENSMUST00000200879 1164 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Ccdc149F6V035 Cartpt-201ENSMUST00000022150 827 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Ccdc149F6V035 Pim2-204ENSMUST00000223553 1113 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ccdc149F6V035 Cartpt-202ENSMUST00000224142 1238 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
Ccdc149F6V035 Ucn-201ENSMUST00000043475 504 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ccdc149F6V035 Erp29-201ENSMUST00000052590 1123 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Ccdc149F6V035 Zswim7-201ENSMUST00000072916 732 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ccdc149F6V035 Mlf1-202ENSMUST00000077916 1114 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ccdc149F6V035 Hist1h2bq-201ENSMUST00000078156 381 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
Ccdc149F6V035 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Ccdc149F6V035 Zdhhc19-201ENSMUST00000064192 1323 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ccdc149F6V035 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC14.82□□□□□ -0.04
Ccdc149F6V035 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC14.82□□□□□ -0.04
Ccdc149F6V035 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC14.82□□□□□ -0.04
Ccdc149F6V035 C130074G19Rik-201ENSMUST00000048308 3035 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ccdc149F6V035 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 80.5 ms