Protein–RNA interactions for Protein: E9Q735

Ube4a, Ubiquitin conjugation factor E4 A, mousemouse

Predictions only

Length 1,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube4aE9Q735 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ube4aE9Q735 Cxcl17-201ENSMUST00000074040 761 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
Ube4aE9Q735 Slc5a5-201ENSMUST00000000809 2928 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ube4aE9Q735 Fam83h-202ENSMUST00000170153 4534 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ube4aE9Q735 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ube4aE9Q735 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Ube4aE9Q735 Zfp57-202ENSMUST00000089968 1991 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ube4aE9Q735 Zscan22-204ENSMUST00000120809 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ube4aE9Q735 Ube2d-ps-205ENSMUST00000142942 1840 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Ube4aE9Q735 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC17.51■□□□□ 0.39
Ube4aE9Q735 Lpar5-201ENSMUST00000088292 1393 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ube4aE9Q735 Prmt5-201ENSMUST00000023873 2691 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ube4aE9Q735 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Ube4aE9Q735 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ube4aE9Q735 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ube4aE9Q735 Fbxo46-202ENSMUST00000165913 2498 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ube4aE9Q735 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC17.5■□□□□ 0.39
Ube4aE9Q735 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ube4aE9Q735 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ube4aE9Q735 Supt5-208ENSMUST00000209141 3755 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ube4aE9Q735 4930402H24Rik-202ENSMUST00000110243 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ube4aE9Q735 Tigd5-201ENSMUST00000192937 4801 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
Ube4aE9Q735 Rhoj-202ENSMUST00000118602 2396 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Ube4aE9Q735 Spaca3-202ENSMUST00000103223 947 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ube4aE9Q735 Rnd1-202ENSMUST00000109149 1034 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Ube4aE9Q735 Id1-202ENSMUST00000109824 1160 ntAPPRIS ALT2 BASIC17.5■□□□□ 0.39
Ube4aE9Q735 Gm15460-201ENSMUST00000118147 391 ntBASIC17.5■□□□□ 0.39
Ube4aE9Q735 Ube2j2-206ENSMUST00000118192 922 ntTSL 5 BASIC17.5■□□□□ 0.39
Ube4aE9Q735 Pax8-208ENSMUST00000153601 1226 ntTSL 5 BASIC17.5■□□□□ 0.39
Ube4aE9Q735 Gm19265-201ENSMUST00000201818 894 ntTSL 3 BASIC17.5■□□□□ 0.39
Ube4aE9Q735 Coq7-205ENSMUST00000209146 799 ntTSL 3 BASIC17.5■□□□□ 0.39
Ube4aE9Q735 Gm40193-201ENSMUST00000209971 237 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
Ube4aE9Q735 Prrg2-207ENSMUST00000210500 922 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
Ube4aE9Q735 Mrps21-202ENSMUST00000072587 405 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ube4aE9Q735 Tssk4-202ENSMUST00000164809 1686 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Ube4aE9Q735 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ube4aE9Q735 Xpo1-202ENSMUST00000102869 6004 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ube4aE9Q735 Cant1-202ENSMUST00000092378 2995 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ube4aE9Q735 Sirt5-207ENSMUST00000221515 1793 ntTSL 5 BASIC17.5■□□□□ 0.39
Ube4aE9Q735 Pde7b-206ENSMUST00000170265 1380 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
Ube4aE9Q735 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ube4aE9Q735 Adck5-214ENSMUST00000162503 2040 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
Ube4aE9Q735 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ube4aE9Q735 Ece2-204ENSMUST00000133344 3042 ntAPPRIS ALT1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ube4aE9Q735 Fam184a-201ENSMUST00000020003 4164 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
Ube4aE9Q735 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
Ube4aE9Q735 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ube4aE9Q735 Rxra-202ENSMUST00000100251 1952 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Ube4aE9Q735 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Ube4aE9Q735 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ube4aE9Q735 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Ube4aE9Q735 Hebp2-201ENSMUST00000020000 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ube4aE9Q735 Rxrb-202ENSMUST00000116612 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ube4aE9Q735 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ube4aE9Q735 Adamts14-201ENSMUST00000092486 5188 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ube4aE9Q735 Gm12786-201ENSMUST00000129617 644 ntTSL 3 BASIC17.49■□□□□ 0.39
Ube4aE9Q735 Gm15491-201ENSMUST00000133963 751 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Ube4aE9Q735 Gm10766-202ENSMUST00000194123 606 ntBASIC17.49■□□□□ 0.39
Ube4aE9Q735 Ighv1-25-201ENSMUST00000195638 345 ntBASIC17.49■□□□□ 0.39
Ube4aE9Q735 Tspan3-203ENSMUST00000215906 842 ntTSL 3 BASIC17.49■□□□□ 0.39
Ube4aE9Q735 Selenow-201ENSMUST00000044355 736 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ube4aE9Q735 Gm9797-201ENSMUST00000052902 613 ntBASIC17.49■□□□□ 0.39
Ube4aE9Q735 Gm9949-201ENSMUST00000067743 962 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ube4aE9Q735 Tmem107-202ENSMUST00000094081 1263 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Ube4aE9Q735 Chaf1b-202ENSMUST00000117099 1894 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
Ube4aE9Q735 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ube4aE9Q735 Ptpn6-203ENSMUST00000171549 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ube4aE9Q735 Sept1-202ENSMUST00000106314 1486 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ube4aE9Q735 Pdlim3-203ENSMUST00000210422 1479 ntAPPRIS ALT1 TSL 5 BASIC17.49■□□□□ 0.39
Ube4aE9Q735 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ube4aE9Q735 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ube4aE9Q735 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ube4aE9Q735 Gm13074-201ENSMUST00000124848 2735 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Ube4aE9Q735 Ntng2-203ENSMUST00000091153 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ube4aE9Q735 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ube4aE9Q735 Zbed5-201ENSMUST00000041466 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ube4aE9Q735 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ube4aE9Q735 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC17.48■□□□□ 0.39
Ube4aE9Q735 Atp6v1c2-208ENSMUST00000221129 1425 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
Ube4aE9Q735 Dusp23-201ENSMUST00000027826 1410 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ube4aE9Q735 Actl7b-201ENSMUST00000095080 1439 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
Ube4aE9Q735 G3bp2-209ENSMUST00000202258 1884 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ube4aE9Q735 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Ube4aE9Q735 P3h1-204ENSMUST00000121111 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ube4aE9Q735 Aldh3a1-201ENSMUST00000019246 1729 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ube4aE9Q735 Gm15393-201ENSMUST00000120499 219 ntBASIC17.48■□□□□ 0.39
Ube4aE9Q735 Tnfrsf12a-202ENSMUST00000167059 858 ntTSL 2 BASIC17.48■□□□□ 0.39
Ube4aE9Q735 Tnfrsf12a-201ENSMUST00000024698 963 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ube4aE9Q735 2610528J11Rik-201ENSMUST00000030261 958 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ube4aE9Q735 Tlcd2-201ENSMUST00000043598 1153 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ube4aE9Q735 Olfr1412-201ENSMUST00000062964 966 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
Ube4aE9Q735 Pdlim7-202ENSMUST00000069929 899 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Ube4aE9Q735 Siglece-201ENSMUST00000032667 1849 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ube4aE9Q735 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
Ube4aE9Q735 Gm5357-201ENSMUST00000212720 1924 ntBASIC17.48■□□□□ 0.39
Ube4aE9Q735 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ube4aE9Q735 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC17.48■□□□□ 0.39
Ube4aE9Q735 Pex11b-207ENSMUST00000165842 1562 ntTSL 2 BASIC17.48■□□□□ 0.39
Ube4aE9Q735 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ube4aE9Q735 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 59 ms