Protein–RNA interactions for Protein: E9Q368

Tarbp1, TAR RNA-binding protein 1, mousemouse

Predictions only

Length 1,579 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tarbp1E9Q368 Gm10584-201ENSMUST00000207036 2628 ntBASIC20.27■□□□□ 0.84
Tarbp1E9Q368 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Tarbp1E9Q368 Ppp1r18-206ENSMUST00000190496 1395 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Tarbp1E9Q368 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC20.27■□□□□ 0.83
Tarbp1E9Q368 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
Tarbp1E9Q368 Pcsk4-201ENSMUST00000020340 2539 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Tarbp1E9Q368 Mettl3-201ENSMUST00000022767 2025 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Tarbp1E9Q368 Snrpn-202ENSMUST00000098402 2076 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
Tarbp1E9Q368 Qsox1-207ENSMUST00000194632 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Tarbp1E9Q368 Zfp296-201ENSMUST00000108453 1530 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Tarbp1E9Q368 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Tarbp1E9Q368 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
Tarbp1E9Q368 Nmi-202ENSMUST00000112705 1130 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Tarbp1E9Q368 H60b-202ENSMUST00000131558 1080 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
Tarbp1E9Q368 AC153962.4-201ENSMUST00000217878 242 ntBASIC20.26■□□□□ 0.83
Tarbp1E9Q368 Tmem179-202ENSMUST00000222836 521 ntTSL 5 BASIC20.26■□□□□ 0.83
Tarbp1E9Q368 Gm9899-201ENSMUST00000065519 555 ntBASIC20.26■□□□□ 0.83
Tarbp1E9Q368 Tmem107-201ENSMUST00000075980 779 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Tarbp1E9Q368 Tomm34-202ENSMUST00000109384 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Tarbp1E9Q368 Psrc1-202ENSMUST00000102629 1687 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Tarbp1E9Q368 Ttll11-202ENSMUST00000112976 3077 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
Tarbp1E9Q368 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Tarbp1E9Q368 Cpeb3-208ENSMUST00000132580 3148 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
Tarbp1E9Q368 Gm6871-201ENSMUST00000073410 1430 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
Tarbp1E9Q368 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
Tarbp1E9Q368 Hdac10-202ENSMUST00000109347 1824 ntTSL 5 BASIC20.26■□□□□ 0.83
Tarbp1E9Q368 Pcna-201ENSMUST00000028817 1518 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Tarbp1E9Q368 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Tarbp1E9Q368 Aifm3-202ENSMUST00000115685 2357 ntAPPRIS ALT1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Tarbp1E9Q368 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Tarbp1E9Q368 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Tarbp1E9Q368 Crem-201ENSMUST00000025069 2931 ntTSL 5 BASIC20.25■□□□□ 0.83
Tarbp1E9Q368 Mrps10-202ENSMUST00000119841 1113 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Tarbp1E9Q368 Mir1894-201ENSMUST00000122802 81 ntBASIC20.25■□□□□ 0.83
Tarbp1E9Q368 Ighv8-14-201ENSMUST00000196781 358 ntBASIC20.25■□□□□ 0.83
Tarbp1E9Q368 AC150560.1-201ENSMUST00000227731 1187 ntBASIC20.25■□□□□ 0.83
Tarbp1E9Q368 Gm5356-201ENSMUST00000093326 615 ntBASIC20.25■□□□□ 0.83
Tarbp1E9Q368 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Tarbp1E9Q368 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Tarbp1E9Q368 Tbc1d16-203ENSMUST00000207655 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Tarbp1E9Q368 Adipor1-202ENSMUST00000112237 3446 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Tarbp1E9Q368 Dok7-201ENSMUST00000050709 2498 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Tarbp1E9Q368 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
Tarbp1E9Q368 Cfap157-201ENSMUST00000102813 1730 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Tarbp1E9Q368 Camp-201ENSMUST00000112022 758 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Tarbp1E9Q368 Gm15420-201ENSMUST00000133274 382 ntTSL 3 BASIC20.25■□□□□ 0.83
Tarbp1E9Q368 Mettl26-203ENSMUST00000163356 534 ntTSL 5 BASIC20.25■□□□□ 0.83
Tarbp1E9Q368 Gm7067-201ENSMUST00000207698 1249 ntBASIC20.25■□□□□ 0.83
Tarbp1E9Q368 Ndufs6-201ENSMUST00000022097 568 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Tarbp1E9Q368 AC110817.1-201ENSMUST00000225706 605 ntBASIC20.25■□□□□ 0.83
Tarbp1E9Q368 Crybb2-201ENSMUST00000031295 724 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Tarbp1E9Q368 Elane-201ENSMUST00000046091 984 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Tarbp1E9Q368 Cep295nl-201ENSMUST00000103024 1944 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Tarbp1E9Q368 Car7-202ENSMUST00000159416 1943 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Tarbp1E9Q368 Acp5-202ENSMUST00000115315 1349 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
Tarbp1E9Q368 Rexo4-202ENSMUST00000114020 2278 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Tarbp1E9Q368 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Tarbp1E9Q368 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Tarbp1E9Q368 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
Tarbp1E9Q368 Ssr1-204ENSMUST00000225319 1610 ntBASIC20.24■□□□□ 0.83
Tarbp1E9Q368 Rsrp1-201ENSMUST00000078084 1749 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Tarbp1E9Q368 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Tarbp1E9Q368 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Tarbp1E9Q368 Htr7-202ENSMUST00000164639 3057 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Tarbp1E9Q368 Tars2-204ENSMUST00000163530 2157 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Tarbp1E9Q368 Trav4-2-201ENSMUST00000103637 370 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
Tarbp1E9Q368 Mif4gd-202ENSMUST00000106506 993 ntTSL 3 BASIC20.24■□□□□ 0.83
Tarbp1E9Q368 Shf-202ENSMUST00000110530 910 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
Tarbp1E9Q368 Atpif1-203ENSMUST00000152993 462 ntTSL 2 BASIC20.24■□□□□ 0.83
Tarbp1E9Q368 Tmem139-201ENSMUST00000095987 1147 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
Tarbp1E9Q368 Ccnc-203ENSMUST00000108240 1406 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Tarbp1E9Q368 Pid1-204ENSMUST00000176559 1564 ntTSL 2 BASIC20.24■□□□□ 0.83
Tarbp1E9Q368 Chit1-201ENSMUST00000086475 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Tarbp1E9Q368 Gatd1-201ENSMUST00000106008 1898 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Tarbp1E9Q368 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Tarbp1E9Q368 Adck5-207ENSMUST00000160784 1998 ntTSL 5 BASIC20.24■□□□□ 0.83
Tarbp1E9Q368 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
Tarbp1E9Q368 Bmp4-201ENSMUST00000074077 2064 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Tarbp1E9Q368 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
Tarbp1E9Q368 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Tarbp1E9Q368 Esrp1-202ENSMUST00000108310 2781 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
Tarbp1E9Q368 Prkcd-207ENSMUST00000112210 2777 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
Tarbp1E9Q368 Spag8-202ENSMUST00000107870 1342 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
Tarbp1E9Q368 Camk2b-208ENSMUST00000109812 1875 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Tarbp1E9Q368 Insc-201ENSMUST00000117543 2170 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
Tarbp1E9Q368 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Tarbp1E9Q368 Rpl27a-203ENSMUST00000143107 1158 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Tarbp1E9Q368 B130055M24Rik-201ENSMUST00000144796 1778 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Tarbp1E9Q368 Gm14224-201ENSMUST00000147187 864 ntTSL 3 BASIC20.23■□□□□ 0.83
Tarbp1E9Q368 Nrsn1-204ENSMUST00000167305 1891 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Tarbp1E9Q368 Tbk1-201ENSMUST00000020316 3024 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Tarbp1E9Q368 AC155258.1-201ENSMUST00000219303 253 ntBASIC20.23■□□□□ 0.83
Tarbp1E9Q368 AC139350.3-201ENSMUST00000226151 420 ntBASIC20.23■□□□□ 0.83
Tarbp1E9Q368 Tex13b-201ENSMUST00000044179 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Tarbp1E9Q368 Clec4g-201ENSMUST00000058040 1441 ntTSL 5 BASIC20.23■□□□□ 0.83
Tarbp1E9Q368 Tbx6-201ENSMUST00000094037 1727 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Tarbp1E9Q368 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Tarbp1E9Q368 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Tarbp1E9Q368 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Tarbp1E9Q368 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC20.22■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 33.7 ms