Protein–RNA interactions for Protein: E9PZM4

Chd2, Chromodomain-helicase-DNA-binding protein 2, mousemouse

Known RBP Predictions only

Length 1,827 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd2E9PZM4 Rpl7a-ps5-201ENSMUST00000095218 807 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
Chd2E9PZM4 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Chd2E9PZM4 Dao-203ENSMUST00000161610 1633 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Chd2E9PZM4 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Chd2E9PZM4 Gm45880-201ENSMUST00000213041 853 ntBASIC19.71■□□□□ 0.75
Chd2E9PZM4 9230020A06Rik-204ENSMUST00000215201 1116 ntTSL 5 BASIC19.71■□□□□ 0.75
Chd2E9PZM4 AC140406.1-201ENSMUST00000226481 465 ntBASIC19.71■□□□□ 0.75
Chd2E9PZM4 Fkbp7-201ENSMUST00000002809 860 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Chd2E9PZM4 Aspdh-201ENSMUST00000035929 1017 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Chd2E9PZM4 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Chd2E9PZM4 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
Chd2E9PZM4 Car6-202ENSMUST00000105683 1460 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Chd2E9PZM4 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Chd2E9PZM4 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
Chd2E9PZM4 Gm13859-201ENSMUST00000119936 1423 ntBASIC19.7■□□□□ 0.74
Chd2E9PZM4 Prn-201ENSMUST00000124100 2132 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
Chd2E9PZM4 Gm45692-201ENSMUST00000131138 557 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
Chd2E9PZM4 Mettl5-201ENSMUST00000060447 968 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
Chd2E9PZM4 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Chd2E9PZM4 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Chd2E9PZM4 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Chd2E9PZM4 Gsdma3-201ENSMUST00000073295 1477 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Chd2E9PZM4 9330020H09Rik-201ENSMUST00000163781 2147 ntTSL 2 BASIC19.7■□□□□ 0.74
Chd2E9PZM4 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Chd2E9PZM4 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
Chd2E9PZM4 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Chd2E9PZM4 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Chd2E9PZM4 Rxra-202ENSMUST00000100251 1952 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Chd2E9PZM4 Rxra-203ENSMUST00000113934 1989 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Chd2E9PZM4 Cdx4-201ENSMUST00000033689 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Chd2E9PZM4 Samhd1-202ENSMUST00000088523 1996 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
Chd2E9PZM4 Gm10369-201ENSMUST00000100641 1148 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Chd2E9PZM4 Men1-210ENSMUST00000166909 295 ntTSL 3 BASIC19.69■□□□□ 0.74
Chd2E9PZM4 6030498E09Rik-202ENSMUST00000168144 510 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
Chd2E9PZM4 Ly6g5b-202ENSMUST00000172854 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Chd2E9PZM4 Gm44066-201ENSMUST00000203263 519 ntTSL 3 BASIC19.69■□□□□ 0.74
Chd2E9PZM4 Olfr284-202ENSMUST00000206647 966 ntBASIC19.69■□□□□ 0.74
Chd2E9PZM4 Gm32850-202ENSMUST00000209149 732 ntTSL 5 BASIC19.69■□□□□ 0.74
Chd2E9PZM4 AC164612.1-201ENSMUST00000216699 517 ntTSL 5 BASIC19.69■□□□□ 0.74
Chd2E9PZM4 Dnajc17-201ENSMUST00000038439 1008 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Chd2E9PZM4 Slc29a1-203ENSMUST00000097317 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Chd2E9PZM4 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
Chd2E9PZM4 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Chd2E9PZM4 Ccno-201ENSMUST00000038404 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Chd2E9PZM4 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
Chd2E9PZM4 Adck5-214ENSMUST00000162503 2040 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
Chd2E9PZM4 Alx1-205ENSMUST00000218282 2012 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
Chd2E9PZM4 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC19.69■□□□□ 0.74
Chd2E9PZM4 Itk-202ENSMUST00000101306 1185 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Chd2E9PZM4 Ppih-203ENSMUST00000106318 800 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Chd2E9PZM4 Gm13070-201ENSMUST00000146532 768 ntTSL 5 BASIC19.69■□□□□ 0.74
Chd2E9PZM4 C87198-201ENSMUST00000173553 1045 ntTSL 3 BASIC19.69■□□□□ 0.74
Chd2E9PZM4 Swi5-207ENSMUST00000183946 768 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
Chd2E9PZM4 Fam173a-201ENSMUST00000072735 800 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Chd2E9PZM4 Gm5779-202ENSMUST00000219564 1477 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Chd2E9PZM4 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Chd2E9PZM4 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Chd2E9PZM4 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
Chd2E9PZM4 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Chd2E9PZM4 Dlk1-205ENSMUST00000109844 1703 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Chd2E9PZM4 Lrrc10-201ENSMUST00000073834 1428 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
Chd2E9PZM4 Ttc14-202ENSMUST00000108210 2684 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
Chd2E9PZM4 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Chd2E9PZM4 Med7-203ENSMUST00000109232 2547 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Chd2E9PZM4 Gm22323-201ENSMUST00000103832 109 ntBASIC19.68■□□□□ 0.74
Chd2E9PZM4 Gm15808-201ENSMUST00000119046 604 ntBASIC19.68■□□□□ 0.74
Chd2E9PZM4 Gm12199-201ENSMUST00000137567 517 ntTSL 3 BASIC19.68■□□□□ 0.74
Chd2E9PZM4 Gm7029-201ENSMUST00000173226 450 ntBASIC19.68■□□□□ 0.74
Chd2E9PZM4 4930432H08Rik-201ENSMUST00000198220 1284 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Chd2E9PZM4 Tmem205-203ENSMUST00000213698 705 ntAPPRIS P1 TSL 3 BASIC19.68■□□□□ 0.74
Chd2E9PZM4 AC167229.2-201ENSMUST00000218902 675 ntTSL 5 BASIC19.68■□□□□ 0.74
Chd2E9PZM4 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Chd2E9PZM4 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Chd2E9PZM4 Abhd14b-201ENSMUST00000048527 1745 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Chd2E9PZM4 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Chd2E9PZM4 Wdr46-201ENSMUST00000025170 2227 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Chd2E9PZM4 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC19.68■□□□□ 0.74
Chd2E9PZM4 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Chd2E9PZM4 Gm26747-201ENSMUST00000180597 1716 ntTSL 5 BASIC19.67■□□□□ 0.74
Chd2E9PZM4 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Chd2E9PZM4 Cpsf4l-203ENSMUST00000106617 1123 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Chd2E9PZM4 4930412M03Rik-201ENSMUST00000130746 1111 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Chd2E9PZM4 2010106C02Rik-201ENSMUST00000191222 660 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Chd2E9PZM4 Gm37466-201ENSMUST00000195692 652 ntBASIC19.67■□□□□ 0.74
Chd2E9PZM4 Ftcd-201ENSMUST00000001183 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Chd2E9PZM4 6030408B16Rik-202ENSMUST00000191426 1947 ntAPPRIS P5 TSL 1 (best) BASIC19.67■□□□□ 0.74
Chd2E9PZM4 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Chd2E9PZM4 Gnb2-202ENSMUST00000111020 1470 ntTSL 5 BASIC19.67■□□□□ 0.74
Chd2E9PZM4 Gm8706-201ENSMUST00000197372 1491 ntBASIC19.67■□□□□ 0.74
Chd2E9PZM4 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Chd2E9PZM4 Mir686-201ENSMUST00000102174 109 ntBASIC19.67■□□□□ 0.74
Chd2E9PZM4 Rpl3-ps2-201ENSMUST00000117131 1214 ntBASIC19.67■□□□□ 0.74
Chd2E9PZM4 Gm5850-201ENSMUST00000192923 1206 ntBASIC19.67■□□□□ 0.74
Chd2E9PZM4 AC073947.2-201ENSMUST00000215888 1130 ntBASIC19.67■□□□□ 0.74
Chd2E9PZM4 Tsc22d4-201ENSMUST00000031738 1043 ntTSL 3 BASIC19.67■□□□□ 0.74
Chd2E9PZM4 Apoa5-201ENSMUST00000034584 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Chd2E9PZM4 Vps51-201ENSMUST00000025711 2489 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Chd2E9PZM4 Alkbh4-202ENSMUST00000100568 1714 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
Chd2E9PZM4 Racgap1-201ENSMUST00000023756 2933 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Chd2E9PZM4 Rnase10-201ENSMUST00000022424 1629 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 31.7 ms