Protein–RNA interactions for Protein: E9PYU5

Gm44503, Predicted readthrough transcript (NMD candidate), 44503, mousemouse

Predictions only

Length 387 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm44503E9PYU5 Clec16a-204ENSMUST00000115824 6244 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
Gm44503E9PYU5 Clec16a-202ENSMUST00000066345 6244 ntAPPRIS P3 TSL 5 BASIC16.75■□□□□ 0.27
Gm44503E9PYU5 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Gm44503E9PYU5 Cgn-202ENSMUST00000107273 5016 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
Gm44503E9PYU5 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Gm44503E9PYU5 Spaca3-202ENSMUST00000103223 947 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Gm44503E9PYU5 Pex11g-202ENSMUST00000111081 666 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Gm44503E9PYU5 Prrx2-202ENSMUST00000113592 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Gm44503E9PYU5 Apoo-203ENSMUST00000113897 1218 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Gm44503E9PYU5 Gm11478-201ENSMUST00000117851 599 ntBASIC16.75■□□□□ 0.27
Gm44503E9PYU5 Gm13134-202ENSMUST00000144347 387 ntTSL 2 BASIC16.75■□□□□ 0.27
Gm44503E9PYU5 Gm12091-201ENSMUST00000146791 830 ntBASIC16.75■□□□□ 0.27
Gm44503E9PYU5 Gm15494-202ENSMUST00000171665 451 ntTSL 2 BASIC16.75■□□□□ 0.27
Gm44503E9PYU5 4930592C13Rik-201ENSMUST00000196791 661 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Gm44503E9PYU5 Tbc1d17-209ENSMUST00000207293 692 ntTSL 3 BASIC16.75■□□□□ 0.27
Gm44503E9PYU5 Gm9182-201ENSMUST00000217829 639 ntBASIC16.75■□□□□ 0.27
Gm44503E9PYU5 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Gm44503E9PYU5 Rpl13a-ps1-201ENSMUST00000071866 612 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
Gm44503E9PYU5 Hist1h3f-201ENSMUST00000075558 1261 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
Gm44503E9PYU5 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Gm44503E9PYU5 Gm38042-201ENSMUST00000191614 5208 ntBASIC16.75■□□□□ 0.27
Gm44503E9PYU5 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Gm44503E9PYU5 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Gm44503E9PYU5 Gm26578-201ENSMUST00000181702 4611 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Gm44503E9PYU5 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Gm44503E9PYU5 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
Gm44503E9PYU5 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Gm44503E9PYU5 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Gm44503E9PYU5 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Gm44503E9PYU5 Sike1-201ENSMUST00000029447 7375 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Gm44503E9PYU5 Gm9115-201ENSMUST00000120192 1348 ntBASIC16.74■□□□□ 0.27
Gm44503E9PYU5 Gm43195-201ENSMUST00000200614 2332 ntBASIC16.74■□□□□ 0.27
Gm44503E9PYU5 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Gm44503E9PYU5 Dcakd-201ENSMUST00000021313 1744 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Gm44503E9PYU5 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Gm44503E9PYU5 Pwwp2a-201ENSMUST00000061070 3277 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Gm44503E9PYU5 Ngf-202ENSMUST00000106925 1187 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Gm44503E9PYU5 Fcnb-202ENSMUST00000117486 873 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Gm44503E9PYU5 Inpp4a-213ENSMUST00000193774 1243 ntTSL 5 BASIC16.74■□□□□ 0.27
Gm44503E9PYU5 Gm37230-201ENSMUST00000194491 818 ntBASIC16.74■□□□□ 0.27
Gm44503E9PYU5 4930500L23Rik-201ENSMUST00000198000 747 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Gm44503E9PYU5 1700028J19Rik-203ENSMUST00000206686 1166 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Gm44503E9PYU5 Isca2-201ENSMUST00000021667 883 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Gm44503E9PYU5 Cela1-201ENSMUST00000023775 1103 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Gm44503E9PYU5 Tgif2-ps2-201ENSMUST00000061746 711 ntBASIC16.74■□□□□ 0.27
Gm44503E9PYU5 Olfr1412-201ENSMUST00000062964 966 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
Gm44503E9PYU5 Gm15823-201ENSMUST00000064305 670 ntBASIC16.74■□□□□ 0.27
Gm44503E9PYU5 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Gm44503E9PYU5 Cdk2-201ENSMUST00000026415 2240 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Gm44503E9PYU5 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
Gm44503E9PYU5 Kdm6b-201ENSMUST00000094077 6654 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
Gm44503E9PYU5 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Gm44503E9PYU5 Zfp647-201ENSMUST00000048854 1608 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Gm44503E9PYU5 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Gm44503E9PYU5 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
Gm44503E9PYU5 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Gm44503E9PYU5 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Gm44503E9PYU5 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Gm44503E9PYU5 Zfp422-203ENSMUST00000112880 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Gm44503E9PYU5 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Gm44503E9PYU5 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Gm44503E9PYU5 Gm16091-201ENSMUST00000156664 963 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Gm44503E9PYU5 U2af1l4-216ENSMUST00000166510 835 ntTSL 5 BASIC16.73■□□□□ 0.27
Gm44503E9PYU5 Gm21854-201ENSMUST00000179901 471 ntBASIC16.73■□□□□ 0.27
Gm44503E9PYU5 Gsg1l2-202ENSMUST00000181566 1158 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
Gm44503E9PYU5 Olfr286-202ENSMUST00000205305 969 ntBASIC16.73■□□□□ 0.27
Gm44503E9PYU5 Nudt17-201ENSMUST00000029742 1039 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Gm44503E9PYU5 Gm25857-201ENSMUST00000082788 129 ntBASIC16.73■□□□□ 0.27
Gm44503E9PYU5 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Gm44503E9PYU5 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Gm44503E9PYU5 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Gm44503E9PYU5 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Gm44503E9PYU5 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Gm44503E9PYU5 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Gm44503E9PYU5 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC16.73■□□□□ 0.27
Gm44503E9PYU5 Krt20-201ENSMUST00000017743 1927 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Gm44503E9PYU5 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Gm44503E9PYU5 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Gm44503E9PYU5 Prkab2-201ENSMUST00000045743 5006 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Gm44503E9PYU5 Ambra1-205ENSMUST00000111317 4929 ntTSL 5 BASIC16.72■□□□□ 0.27
Gm44503E9PYU5 Prkg1-206ENSMUST00000182685 1628 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Gm44503E9PYU5 Snrnp27-202ENSMUST00000113683 1005 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Gm44503E9PYU5 Snhg17-201ENSMUST00000133449 933 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Gm44503E9PYU5 Nfya-203ENSMUST00000159063 1255 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Gm44503E9PYU5 Gm37917-201ENSMUST00000194711 392 ntBASIC16.72■□□□□ 0.27
Gm44503E9PYU5 Gm45059-201ENSMUST00000205558 1077 ntBASIC16.72■□□□□ 0.27
Gm44503E9PYU5 AC121804.3-201ENSMUST00000223420 295 ntBASIC16.72■□□□□ 0.27
Gm44503E9PYU5 AC156016.3-201ENSMUST00000228623 344 ntBASIC16.72■□□□□ 0.27
Gm44503E9PYU5 Ufsp1-201ENSMUST00000052825 1037 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
Gm44503E9PYU5 Lrif1-202ENSMUST00000098751 929 ntTSL 2 BASIC16.72■□□□□ 0.27
Gm44503E9PYU5 Disp2-204ENSMUST00000110846 1732 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Gm44503E9PYU5 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Gm44503E9PYU5 Nap1l5-201ENSMUST00000059539 1844 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
Gm44503E9PYU5 Nap1l4-209ENSMUST00000209098 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Gm44503E9PYU5 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Gm44503E9PYU5 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Gm44503E9PYU5 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Gm44503E9PYU5 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Gm44503E9PYU5 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Gm44503E9PYU5 Esr1-202ENSMUST00000105588 2733 ntTSL 5 BASIC16.71■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 30.4 ms