Protein–RNA interactions for Protein: E9PWQ3

Col6a3, Collagen, type VI, alpha 3, mousemouse

Predictions only

Length 3,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a3E9PWQ3 Gm15460-201ENSMUST00000118147 391 ntBASIC14.36□□□□□ -0.11
Col6a3E9PWQ3 Gm11597-201ENSMUST00000121423 964 ntBASIC14.36□□□□□ -0.11
Col6a3E9PWQ3 Gm11675-201ENSMUST00000121873 832 ntBASIC14.36□□□□□ -0.11
Col6a3E9PWQ3 Mb-202ENSMUST00000166179 1056 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Col6a3E9PWQ3 Mb-203ENSMUST00000169226 1106 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Col6a3E9PWQ3 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Col6a3E9PWQ3 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Col6a3E9PWQ3 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Col6a3E9PWQ3 Gm9431-201ENSMUST00000119765 1051 ntBASIC14.35□□□□□ -0.11
Col6a3E9PWQ3 Gm13496-201ENSMUST00000141133 1165 ntTSL 2 BASIC14.35□□□□□ -0.11
Col6a3E9PWQ3 Coa3-202ENSMUST00000168089 291 ntTSL 3 BASIC14.35□□□□□ -0.11
Col6a3E9PWQ3 Ighv2-3-201ENSMUST00000178229 347 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Col6a3E9PWQ3 4930516B21Rik-201ENSMUST00000181600 1195 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Col6a3E9PWQ3 Gm45118-201ENSMUST00000208928 825 ntBASIC14.35□□□□□ -0.11
Col6a3E9PWQ3 Asphd1-201ENSMUST00000052937 730 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Col6a3E9PWQ3 Gm5773-201ENSMUST00000090853 1143 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Col6a3E9PWQ3 Tpd52-203ENSMUST00000091355 3081 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Col6a3E9PWQ3 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Col6a3E9PWQ3 4930459C07Rik-202ENSMUST00000219638 1805 ntTSL 5 BASIC14.35□□□□□ -0.11
Col6a3E9PWQ3 Phospho2-201ENSMUST00000028494 2260 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Col6a3E9PWQ3 Wbp2nl-201ENSMUST00000023089 1318 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Col6a3E9PWQ3 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Col6a3E9PWQ3 Nccrp1-201ENSMUST00000057974 1531 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Col6a3E9PWQ3 Ggh-201ENSMUST00000098242 1965 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Col6a3E9PWQ3 Fam71f2-201ENSMUST00000115286 1180 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Col6a3E9PWQ3 Gm25927-201ENSMUST00000175058 117 ntBASIC14.35□□□□□ -0.11
Col6a3E9PWQ3 Gm29187-201ENSMUST00000186681 689 ntTSL 3 BASIC14.35□□□□□ -0.11
Col6a3E9PWQ3 AC153872.1-201ENSMUST00000199539 128 ntBASIC14.35□□□□□ -0.11
Col6a3E9PWQ3 Gm10608-202ENSMUST00000213924 676 ntBASIC14.35□□□□□ -0.11
Col6a3E9PWQ3 Gm3756-201ENSMUST00000169182 1355 ntBASIC14.35□□□□□ -0.11
Col6a3E9PWQ3 Gm34419-201ENSMUST00000211383 1387 ntTSL 5 BASIC14.35□□□□□ -0.11
Col6a3E9PWQ3 Bet1l-201ENSMUST00000026557 2268 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Col6a3E9PWQ3 Elk4-201ENSMUST00000027696 1586 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Col6a3E9PWQ3 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Col6a3E9PWQ3 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Col6a3E9PWQ3 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Col6a3E9PWQ3 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Col6a3E9PWQ3 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC14.34□□□□□ -0.11
Col6a3E9PWQ3 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Col6a3E9PWQ3 Gm44729-201ENSMUST00000206759 2052 ntBASIC14.34□□□□□ -0.11
Col6a3E9PWQ3 Dbndd1-201ENSMUST00000176155 1677 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Col6a3E9PWQ3 Qdpr-203ENSMUST00000118097 1232 ntTSL 5 BASIC14.34□□□□□ -0.11
Col6a3E9PWQ3 Polr3c-202ENSMUST00000125183 923 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Col6a3E9PWQ3 Ccdc188-201ENSMUST00000167061 747 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Col6a3E9PWQ3 Gm9124-201ENSMUST00000191789 1092 ntBASIC14.34□□□□□ -0.11
Col6a3E9PWQ3 Gm9113-201ENSMUST00000192510 1018 ntBASIC14.34□□□□□ -0.11
Col6a3E9PWQ3 Gm9131-201ENSMUST00000193557 1089 ntBASIC14.34□□□□□ -0.11
Col6a3E9PWQ3 Gm9121-201ENSMUST00000193749 1071 ntBASIC14.34□□□□□ -0.11
Col6a3E9PWQ3 Fam173b-201ENSMUST00000042702 1164 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Col6a3E9PWQ3 Lrriq4-202ENSMUST00000108267 2387 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Col6a3E9PWQ3 Grik2-210ENSMUST00000220263 2085 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Col6a3E9PWQ3 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Col6a3E9PWQ3 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Col6a3E9PWQ3 Gm24830-201ENSMUST00000102024 166 ntBASIC14.34□□□□□ -0.11
Col6a3E9PWQ3 Gm15370-201ENSMUST00000117158 253 ntBASIC14.34□□□□□ -0.11
Col6a3E9PWQ3 Gm13834-201ENSMUST00000123757 137 ntTSL 3 BASIC14.34□□□□□ -0.11
Col6a3E9PWQ3 Tmem190-201ENSMUST00000013235 589 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Col6a3E9PWQ3 Gm25890-201ENSMUST00000177643 165 ntBASIC14.34□□□□□ -0.11
Col6a3E9PWQ3 Rnu1b2-201ENSMUST00000178073 165 ntBASIC14.34□□□□□ -0.11
Col6a3E9PWQ3 Rnu1b1-201ENSMUST00000178250 165 ntBASIC14.34□□□□□ -0.11
Col6a3E9PWQ3 Gm22614-201ENSMUST00000178300 165 ntBASIC14.34□□□□□ -0.11
Col6a3E9PWQ3 Ier3-201ENSMUST00000003635 1131 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Col6a3E9PWQ3 Gm22042-201ENSMUST00000082989 165 ntBASIC14.34□□□□□ -0.11
Col6a3E9PWQ3 Gm26232-201ENSMUST00000083360 166 ntBASIC14.34□□□□□ -0.11
Col6a3E9PWQ3 Gm24136-201ENSMUST00000083374 165 ntBASIC14.34□□□□□ -0.11
Col6a3E9PWQ3 Rnu1b6-201ENSMUST00000083839 166 ntBASIC14.34□□□□□ -0.11
Col6a3E9PWQ3 Gm26110-201ENSMUST00000083971 165 ntBASIC14.34□□□□□ -0.11
Col6a3E9PWQ3 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Col6a3E9PWQ3 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Col6a3E9PWQ3 Dlk1-204ENSMUST00000109843 1300 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Col6a3E9PWQ3 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Col6a3E9PWQ3 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Col6a3E9PWQ3 Taz-204ENSMUST00000124200 1742 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Col6a3E9PWQ3 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Col6a3E9PWQ3 Lexm-204ENSMUST00000189032 1549 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Col6a3E9PWQ3 Gm7029-201ENSMUST00000173226 450 ntBASIC14.33□□□□□ -0.11
Col6a3E9PWQ3 Hspb2-202ENSMUST00000217159 552 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
Col6a3E9PWQ3 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
Col6a3E9PWQ3 Pxn-214ENSMUST00000212819 1689 ntTSL 5 BASIC14.33□□□□□ -0.11
Col6a3E9PWQ3 Ece2-204ENSMUST00000133344 3042 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Col6a3E9PWQ3 Tox3-201ENSMUST00000109621 3356 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Col6a3E9PWQ3 Rbm42-201ENSMUST00000042726 1784 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Col6a3E9PWQ3 Pcna-201ENSMUST00000028817 1518 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Col6a3E9PWQ3 Lrguk-202ENSMUST00000101564 967 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Col6a3E9PWQ3 Gm7008-202ENSMUST00000170019 402 ntTSL 2 BASIC14.33□□□□□ -0.12
Col6a3E9PWQ3 Gm44397-201ENSMUST00000195950 113 ntBASIC14.33□□□□□ -0.12
Col6a3E9PWQ3 1700017L05Rik-201ENSMUST00000201654 558 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Col6a3E9PWQ3 Gm45098-201ENSMUST00000207179 657 ntBASIC14.33□□□□□ -0.12
Col6a3E9PWQ3 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Col6a3E9PWQ3 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Col6a3E9PWQ3 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Col6a3E9PWQ3 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Col6a3E9PWQ3 Ncmap-202ENSMUST00000105857 958 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Col6a3E9PWQ3 Gm4986-201ENSMUST00000119731 549 ntBASIC14.33□□□□□ -0.12
Col6a3E9PWQ3 Gm37489-201ENSMUST00000191883 159 ntBASIC14.33□□□□□ -0.12
Col6a3E9PWQ3 Umad1-208ENSMUST00000162034 2015 ntAPPRIS ALT2 TSL 3 BASIC14.33□□□□□ -0.12
Col6a3E9PWQ3 Gm2237-202ENSMUST00000170694 2090 ntAPPRIS P5 TSL 5 BASIC14.32□□□□□ -0.12
Col6a3E9PWQ3 Kcnip1-202ENSMUST00000101368 2322 ntTSL 2 BASIC14.32□□□□□ -0.12
Col6a3E9PWQ3 2810039B14Rik-206ENSMUST00000185040 1113 ntBASIC14.32□□□□□ -0.12
Col6a3E9PWQ3 AC154806.6-201ENSMUST00000228192 202 ntBASIC14.32□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 42.7 ms