Protein–RNA interactions for Protein: D3YZU1

Shank1, SH3 and multiple ankyrin repeat domains protein 1, mousemouse

Predictions only

Length 2,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shank1D3YZU1 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Shank1D3YZU1 Cox16-201ENSMUST00000002757 2007 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Shank1D3YZU1 Zpbp2-201ENSMUST00000017339 1455 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Shank1D3YZU1 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Shank1D3YZU1 Gm17315-201ENSMUST00000181408 2504 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Shank1D3YZU1 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Shank1D3YZU1 Casz1-202ENSMUST00000122222 7926 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Shank1D3YZU1 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Shank1D3YZU1 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Shank1D3YZU1 Nfyb-204ENSMUST00000130911 2554 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Shank1D3YZU1 Mrps17-202ENSMUST00000118420 843 ntAPPRIS P1 TSL 2 BASIC13.1□□□□□ -0.31
Shank1D3YZU1 Rab11fip4os2-201ENSMUST00000123067 689 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Shank1D3YZU1 A930015D03Rik-201ENSMUST00000173900 1111 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Shank1D3YZU1 Inpp4a-213ENSMUST00000193774 1243 ntTSL 5 BASIC13.1□□□□□ -0.31
Shank1D3YZU1 Crip2-202ENSMUST00000196015 772 ntTSL 3 BASIC13.1□□□□□ -0.31
Shank1D3YZU1 Gm5149-201ENSMUST00000199768 620 ntTSL 3 BASIC13.1□□□□□ -0.31
Shank1D3YZU1 AC155729.1-201ENSMUST00000227758 544 ntBASIC13.1□□□□□ -0.31
Shank1D3YZU1 Gm15823-201ENSMUST00000064305 670 ntBASIC13.1□□□□□ -0.31
Shank1D3YZU1 Hist1h3b-201ENSMUST00000091703 620 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
Shank1D3YZU1 Ftl1-201ENSMUST00000094434 968 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Shank1D3YZU1 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Shank1D3YZU1 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Shank1D3YZU1 Slc7a15-204ENSMUST00000165657 1467 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Shank1D3YZU1 Slc7a15-202ENSMUST00000095863 1467 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Shank1D3YZU1 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Shank1D3YZU1 Psmd5-201ENSMUST00000028225 4397 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Shank1D3YZU1 Camkv-201ENSMUST00000035700 3277 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Shank1D3YZU1 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
Shank1D3YZU1 Arpc4-203ENSMUST00000203578 1323 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Shank1D3YZU1 Fzd6-202ENSMUST00000179165 4325 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Shank1D3YZU1 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Shank1D3YZU1 Mis12-206ENSMUST00000164220 1416 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Shank1D3YZU1 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Shank1D3YZU1 Fbxo30-202ENSMUST00000129456 5060 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Shank1D3YZU1 Txndc11-203ENSMUST00000118679 3523 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Shank1D3YZU1 Ginm1-204ENSMUST00000124838 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Shank1D3YZU1 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC13.09□□□□□ -0.31
Shank1D3YZU1 Trav4-2-201ENSMUST00000103637 370 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
Shank1D3YZU1 Boll-202ENSMUST00000114423 1106 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Shank1D3YZU1 Ankzf1-201ENSMUST00000127625 1167 ntTSL 5 BASIC13.09□□□□□ -0.31
Shank1D3YZU1 Gm16175-201ENSMUST00000128181 248 ntTSL 3 BASIC13.09□□□□□ -0.31
Shank1D3YZU1 1700067P10Rik-201ENSMUST00000022028 794 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Shank1D3YZU1 Srd5a2-201ENSMUST00000043458 854 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Shank1D3YZU1 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC13.09□□□□□ -0.31
Shank1D3YZU1 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Shank1D3YZU1 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Shank1D3YZU1 Rapsn-203ENSMUST00000111446 1458 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Shank1D3YZU1 Megf9-202ENSMUST00000107359 7924 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Shank1D3YZU1 Cep85l-205ENSMUST00000220443 7425 ntAPPRIS P2 TSL 5 BASIC13.09□□□□□ -0.31
Shank1D3YZU1 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Shank1D3YZU1 Krt14-201ENSMUST00000007272 1698 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Shank1D3YZU1 Nop56-202ENSMUST00000103198 1877 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Shank1D3YZU1 Ldhal6b-201ENSMUST00000189788 1445 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
Shank1D3YZU1 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Shank1D3YZU1 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Shank1D3YZU1 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
Shank1D3YZU1 Plod2-203ENSMUST00000160359 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Shank1D3YZU1 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Shank1D3YZU1 Elovl1-201ENSMUST00000006557 1811 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Shank1D3YZU1 Klhl9-201ENSMUST00000094993 4174 ntAPPRIS P1 BASIC13.08□□□□□ -0.31
Shank1D3YZU1 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.31
Shank1D3YZU1 Gapvd1-202ENSMUST00000102800 8339 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.31
Shank1D3YZU1 Dnajc5-202ENSMUST00000108796 934 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.31
Shank1D3YZU1 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Shank1D3YZU1 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Shank1D3YZU1 Vps29-204ENSMUST00000118830 1014 ntAPPRIS ALT1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Shank1D3YZU1 Mturn-202ENSMUST00000187701 503 ntTSL 5 BASIC13.08□□□□□ -0.31
Shank1D3YZU1 Apol7d-201ENSMUST00000097699 826 ntTSL 2 BASIC13.08□□□□□ -0.31
Shank1D3YZU1 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.31
Shank1D3YZU1 Coro6-205ENSMUST00000108391 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Shank1D3YZU1 Frmd4b-203ENSMUST00000113355 4913 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Shank1D3YZU1 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
Shank1D3YZU1 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Shank1D3YZU1 Fgfr4-201ENSMUST00000005452 3324 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Shank1D3YZU1 Pcolce2-201ENSMUST00000015498 4438 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Shank1D3YZU1 Spred2-202ENSMUST00000093299 4449 ntTSL 5 BASIC13.08□□□□□ -0.32
Shank1D3YZU1 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Shank1D3YZU1 Gm9115-201ENSMUST00000120192 1348 ntBASIC13.08□□□□□ -0.32
Shank1D3YZU1 Nt5c3b-205ENSMUST00000107399 1427 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Shank1D3YZU1 Pcp2-202ENSMUST00000128566 1447 ntAPPRIS ALT2 TSL 2 BASIC13.08□□□□□ -0.32
Shank1D3YZU1 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Shank1D3YZU1 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Shank1D3YZU1 Fut11-201ENSMUST00000048016 4163 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Shank1D3YZU1 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Shank1D3YZU1 Zic4-209ENSMUST00000173933 1764 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
Shank1D3YZU1 Ccnt2-202ENSMUST00000112570 4511 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Shank1D3YZU1 Ube2j2-206ENSMUST00000118192 922 ntTSL 5 BASIC13.08□□□□□ -0.32
Shank1D3YZU1 Gm15824-201ENSMUST00000119516 955 ntBASIC13.08□□□□□ -0.32
Shank1D3YZU1 Gm11425-201ENSMUST00000119608 498 ntBASIC13.08□□□□□ -0.32
Shank1D3YZU1 Gm7820-201ENSMUST00000121012 1052 ntBASIC13.08□□□□□ -0.32
Shank1D3YZU1 Gm15593-201ENSMUST00000122085 1008 ntBASIC13.08□□□□□ -0.32
Shank1D3YZU1 Rpl12-203ENSMUST00000126610 1242 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Shank1D3YZU1 Gm26953-206ENSMUST00000212840 619 ntTSL 5 BASIC13.08□□□□□ -0.32
Shank1D3YZU1 Rpp21-201ENSMUST00000025319 729 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Shank1D3YZU1 Ndufa8-201ENSMUST00000070112 861 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Shank1D3YZU1 Gm9396-201ENSMUST00000076703 567 ntBASIC13.08□□□□□ -0.32
Shank1D3YZU1 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Shank1D3YZU1 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Shank1D3YZU1 Sept4-201ENSMUST00000018544 1726 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Shank1D3YZU1 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC13.08□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 68.9 ms