Protein–RNA interactions for Protein: B1AVM1

Gm12887, Predicted gene 12887, mousemouse

Predictions only

Length 119 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm12887B1AVM1 Me1-201ENSMUST00000034989 3288 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Gm12887B1AVM1 Gm2895-201ENSMUST00000171591 3194 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Gm12887B1AVM1 Sphk2-201ENSMUST00000072836 2968 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Gm12887B1AVM1 Tmem19-203ENSMUST00000217884 2799 ntTSL 5 BASIC11.85□□□□□ -0.51
Gm12887B1AVM1 Fam46a-201ENSMUST00000034802 5479 ntAPPRIS P3 TSL 3 BASIC11.85□□□□□ -0.51
Gm12887B1AVM1 Diaph1-202ENSMUST00000080033 4378 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Gm12887B1AVM1 Zfp219-201ENSMUST00000067549 2933 ntAPPRIS P2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Gm12887B1AVM1 Pdia2-202ENSMUST00000120333 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Gm12887B1AVM1 Otud4-203ENSMUST00000173286 7213 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Gm12887B1AVM1 Tmc8-202ENSMUST00000106334 2644 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Gm12887B1AVM1 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Gm12887B1AVM1 Gm36445-203ENSMUST00000209951 1597 ntTSL 5 BASIC11.85□□□□□ -0.51
Gm12887B1AVM1 Gli2-201ENSMUST00000062483 6637 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Gm12887B1AVM1 Tfe3-211ENSMUST00000137467 3390 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Gm12887B1AVM1 Bcl2-201ENSMUST00000112751 7191 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Gm12887B1AVM1 March8-213ENSMUST00000203193 4245 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Gm12887B1AVM1 Phka2-202ENSMUST00000112376 2310 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Gm12887B1AVM1 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Gm12887B1AVM1 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
Gm12887B1AVM1 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Gm12887B1AVM1 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC11.85□□□□□ -0.51
Gm12887B1AVM1 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Gm12887B1AVM1 Gm25745-201ENSMUST00000174945 133 ntBASIC11.85□□□□□ -0.51
Gm12887B1AVM1 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC11.85□□□□□ -0.51
Gm12887B1AVM1 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
Gm12887B1AVM1 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Gm12887B1AVM1 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC11.85□□□□□ -0.51
Gm12887B1AVM1 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Gm12887B1AVM1 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC11.85□□□□□ -0.51
Gm12887B1AVM1 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Gm12887B1AVM1 Cpne6-202ENSMUST00000163767 2004 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
Gm12887B1AVM1 Snx8-205ENSMUST00000196566 1914 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
Gm12887B1AVM1 Nxpe5-202ENSMUST00000159798 2568 ntAPPRIS P2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Gm12887B1AVM1 Snph-201ENSMUST00000028951 4730 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
Gm12887B1AVM1 Dnm1-214ENSMUST00000201433 3146 ntAPPRIS ALT1 TSL 5 BASIC11.85□□□□□ -0.51
Gm12887B1AVM1 B4galnt1-201ENSMUST00000006914 2395 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Gm12887B1AVM1 Hdac5-203ENSMUST00000107151 4852 ntTSL 5 BASIC11.85□□□□□ -0.51
Gm12887B1AVM1 Pam-202ENSMUST00000097625 4102 ntAPPRIS P2 TSL 5 BASIC11.85□□□□□ -0.51
Gm12887B1AVM1 Chrnb1-201ENSMUST00000045971 2155 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Gm12887B1AVM1 Phka1-206ENSMUST00000122022 6115 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
Gm12887B1AVM1 Gm30238-201ENSMUST00000195528 2603 ntBASIC11.85□□□□□ -0.51
Gm12887B1AVM1 Phka1-202ENSMUST00000052012 6115 ntAPPRIS P4 TSL 1 (best) BASIC11.85□□□□□ -0.51
Gm12887B1AVM1 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Gm12887B1AVM1 B130055M24Rik-201ENSMUST00000144796 1778 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Gm12887B1AVM1 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC11.84□□□□□ -0.51
Gm12887B1AVM1 Tmem8b-202ENSMUST00000107865 4775 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Gm12887B1AVM1 Hif1a-201ENSMUST00000021530 4724 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
Gm12887B1AVM1 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Gm12887B1AVM1 Ccdc181-201ENSMUST00000027867 1909 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Gm12887B1AVM1 Fh1-201ENSMUST00000027810 2636 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Gm12887B1AVM1 Chml-201ENSMUST00000104984 6905 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
Gm12887B1AVM1 Chml-202ENSMUST00000209720 6905 ntTSL 5 BASIC11.84□□□□□ -0.51
Gm12887B1AVM1 Slc27a1-201ENSMUST00000034267 2795 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Gm12887B1AVM1 Adgrb2-202ENSMUST00000097868 4635 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
Gm12887B1AVM1 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
Gm12887B1AVM1 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC11.84□□□□□ -0.51
Gm12887B1AVM1 Gm4459-201ENSMUST00000118750 468 ntBASIC11.84□□□□□ -0.51
Gm12887B1AVM1 Gm12497-201ENSMUST00000138778 237 ntBASIC11.84□□□□□ -0.51
Gm12887B1AVM1 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC11.84□□□□□ -0.51
Gm12887B1AVM1 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC11.84□□□□□ -0.51
Gm12887B1AVM1 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC11.84□□□□□ -0.51
Gm12887B1AVM1 Gm5587-201ENSMUST00000206270 674 ntBASIC11.84□□□□□ -0.51
Gm12887B1AVM1 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Gm12887B1AVM1 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Gm12887B1AVM1 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Gm12887B1AVM1 Zbtb5-202ENSMUST00000107817 3867 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Gm12887B1AVM1 Ripk4-201ENSMUST00000019386 3541 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Gm12887B1AVM1 Gm38197-201ENSMUST00000192320 2122 ntBASIC11.84□□□□□ -0.51
Gm12887B1AVM1 Cald1-201ENSMUST00000031775 2142 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
Gm12887B1AVM1 Slfnl1-201ENSMUST00000062990 1762 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Gm12887B1AVM1 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Gm12887B1AVM1 Exosc5-206ENSMUST00000206561 1680 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Gm12887B1AVM1 1300017J02Rik-201ENSMUST00000035163 2284 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Gm12887B1AVM1 Trim2-203ENSMUST00000107691 7428 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Gm12887B1AVM1 Chtf8-202ENSMUST00000175940 2890 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Gm12887B1AVM1 Ext1-201ENSMUST00000077273 7663 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Gm12887B1AVM1 Ube3b-201ENSMUST00000074002 5194 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Gm12887B1AVM1 Ahdc1-204ENSMUST00000105916 6602 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
Gm12887B1AVM1 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Gm12887B1AVM1 Serpinh1-205ENSMUST00000208119 2173 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Gm12887B1AVM1 Fam3a-205ENSMUST00000114142 1586 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
Gm12887B1AVM1 Grb2-203ENSMUST00000106497 2683 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.51
Gm12887B1AVM1 Gm4081-201ENSMUST00000195287 1838 ntBASIC11.83□□□□□ -0.51
Gm12887B1AVM1 Dmkn-205ENSMUST00000165887 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.51
Gm12887B1AVM1 Rnf168-201ENSMUST00000014218 3932 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Gm12887B1AVM1 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Gm12887B1AVM1 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC11.83□□□□□ -0.52
Gm12887B1AVM1 Ikzf4-201ENSMUST00000133342 5150 ntAPPRIS P1 TSL 2 BASIC11.83□□□□□ -0.52
Gm12887B1AVM1 Kif9-204ENSMUST00000198043 2233 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Gm12887B1AVM1 Cog3-201ENSMUST00000049168 4222 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Gm12887B1AVM1 Thap2-202ENSMUST00000218842 4970 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Gm12887B1AVM1 Pdcd6ip-201ENSMUST00000035086 5951 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
Gm12887B1AVM1 Dnase1l2-202ENSMUST00000119932 1629 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Gm12887B1AVM1 Foxj2-202ENSMUST00000177927 4620 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
Gm12887B1AVM1 Gars-201ENSMUST00000003572 2380 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Gm12887B1AVM1 Tubb3-201ENSMUST00000071134 1868 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Gm12887B1AVM1 Gtf2ird1-229ENSMUST00000202554 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Gm12887B1AVM1 Caprin1-201ENSMUST00000028607 6169 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Gm12887B1AVM1 Kcnc4-201ENSMUST00000009617 3667 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Gm12887B1AVM1 Yipf6-201ENSMUST00000054697 5211 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 22.1 ms