Protein–RNA interactions for Protein: A2AX52

Col6a4, Collagen alpha-4(VI) chain, mousemouse

Predictions only

Length 2,309 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a4A2AX52 Crip3-202ENSMUST00000113465 1035 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Col6a4A2AX52 Gm15701-201ENSMUST00000129559 573 ntTSL 3 BASIC12.33□□□□□ -0.44
Col6a4A2AX52 Gm833-201ENSMUST00000143133 884 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Col6a4A2AX52 Snu13-203ENSMUST00000166578 1061 ntTSL 2 BASIC12.33□□□□□ -0.44
Col6a4A2AX52 Il31-203ENSMUST00000198901 984 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Col6a4A2AX52 Dnajc22-201ENSMUST00000061295 1564 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Col6a4A2AX52 Spryd4-201ENSMUST00000061995 1583 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Col6a4A2AX52 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Col6a4A2AX52 A530083I20Rik-203ENSMUST00000214426 1855 ntTSL 5 BASIC12.33□□□□□ -0.44
Col6a4A2AX52 Arid1b-202ENSMUST00000115797 11325 ntAPPRIS P2 TSL 5 BASIC12.33□□□□□ -0.44
Col6a4A2AX52 Rbbp8-201ENSMUST00000047322 3618 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Col6a4A2AX52 Papd5-201ENSMUST00000066748 4489 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Col6a4A2AX52 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Col6a4A2AX52 Yipf5-201ENSMUST00000025364 2329 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Col6a4A2AX52 Cyp2u1-201ENSMUST00000106337 4378 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Col6a4A2AX52 Sirt5-207ENSMUST00000221515 1793 ntTSL 5 BASIC12.33□□□□□ -0.44
Col6a4A2AX52 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Col6a4A2AX52 Sec22b-203ENSMUST00000130620 640 ntTSL 2 BASIC12.33□□□□□ -0.44
Col6a4A2AX52 Crip2-202ENSMUST00000196015 772 ntTSL 3 BASIC12.33□□□□□ -0.44
Col6a4A2AX52 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Col6a4A2AX52 Nfix-203ENSMUST00000109762 2261 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Col6a4A2AX52 Ttll11-202ENSMUST00000112976 3077 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Col6a4A2AX52 Adamts14-201ENSMUST00000092486 5188 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Col6a4A2AX52 Zfp316-201ENSMUST00000051665 3054 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Col6a4A2AX52 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Col6a4A2AX52 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Col6a4A2AX52 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Col6a4A2AX52 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Col6a4A2AX52 Tmem109-207ENSMUST00000147699 1096 ntTSL 2 BASIC12.32□□□□□ -0.44
Col6a4A2AX52 Agrp-202ENSMUST00000194091 734 ntAPPRIS P1 TSL 2 BASIC12.32□□□□□ -0.44
Col6a4A2AX52 1700017L05Rik-201ENSMUST00000201654 558 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Col6a4A2AX52 AC159474.1-201ENSMUST00000218454 374 ntTSL 3 BASIC12.32□□□□□ -0.44
Col6a4A2AX52 Rpp21-201ENSMUST00000025319 729 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Col6a4A2AX52 Mesd-201ENSMUST00000094215 4492 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Col6a4A2AX52 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Col6a4A2AX52 Sh2b3-202ENSMUST00000086310 4195 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Col6a4A2AX52 Socs7-201ENSMUST00000045540 7015 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Col6a4A2AX52 Fbxw2-205ENSMUST00000113078 1872 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Col6a4A2AX52 Fbxo5-201ENSMUST00000019907 1940 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Col6a4A2AX52 Zpbp2-201ENSMUST00000017339 1455 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Col6a4A2AX52 Cux1-212ENSMUST00000176778 5520 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Col6a4A2AX52 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
Col6a4A2AX52 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
Col6a4A2AX52 Dnajc1-209ENSMUST00000166495 5497 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Col6a4A2AX52 Slc25a19-201ENSMUST00000021089 2307 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Col6a4A2AX52 Hspb8-201ENSMUST00000036991 1816 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Col6a4A2AX52 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Col6a4A2AX52 Scyl3-201ENSMUST00000027876 4368 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Col6a4A2AX52 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Col6a4A2AX52 Ighv4-1-201ENSMUST00000103464 414 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
Col6a4A2AX52 Ldha-ps-201ENSMUST00000119390 995 ntBASIC12.32□□□□□ -0.44
Col6a4A2AX52 Mir1982-201ENSMUST00000157368 74 ntBASIC12.32□□□□□ -0.44
Col6a4A2AX52 Commd6-203ENSMUST00000168587 519 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Col6a4A2AX52 1700029B24Rik-201ENSMUST00000194040 497 ntBASIC12.32□□□□□ -0.44
Col6a4A2AX52 Lcmt1-204ENSMUST00000206574 1286 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Col6a4A2AX52 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC12.32□□□□□ -0.44
Col6a4A2AX52 Fam160a2-204ENSMUST00000122327 3521 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Col6a4A2AX52 4930473A02Rik-202ENSMUST00000136793 1409 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Col6a4A2AX52 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Col6a4A2AX52 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Col6a4A2AX52 Ablim3-201ENSMUST00000049378 4532 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Col6a4A2AX52 Sesn3-201ENSMUST00000034507 1827 ntTSL 5 BASIC12.31□□□□□ -0.44
Col6a4A2AX52 Hectd2-201ENSMUST00000047247 4731 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Col6a4A2AX52 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Col6a4A2AX52 Grk5-201ENSMUST00000003313 3165 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Col6a4A2AX52 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC12.31□□□□□ -0.44
Col6a4A2AX52 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Col6a4A2AX52 Il13-201ENSMUST00000020650 1205 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Col6a4A2AX52 Polr2h-201ENSMUST00000021405 950 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Col6a4A2AX52 AC149588.3-201ENSMUST00000227515 150 ntBASIC12.31□□□□□ -0.44
Col6a4A2AX52 Tpd52-201ENSMUST00000063496 697 ntTSL 2 BASIC12.31□□□□□ -0.44
Col6a4A2AX52 Pcgf1-201ENSMUST00000092614 866 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Col6a4A2AX52 Odf3l2-201ENSMUST00000095464 1248 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Col6a4A2AX52 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Col6a4A2AX52 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Col6a4A2AX52 Megf9-202ENSMUST00000107359 7924 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Col6a4A2AX52 Sez6-202ENSMUST00000093995 4239 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Col6a4A2AX52 Tm9sf1-203ENSMUST00000121791 2148 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Col6a4A2AX52 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Col6a4A2AX52 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Col6a4A2AX52 Zfp683-201ENSMUST00000105884 1471 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Col6a4A2AX52 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Col6a4A2AX52 Gm16000-201ENSMUST00000146657 447 ntTSL 2 BASIC12.31□□□□□ -0.44
Col6a4A2AX52 Ggnbp2-211ENSMUST00000168434 3056 ntAPPRIS ALT1 TSL 5 BASIC12.31□□□□□ -0.44
Col6a4A2AX52 Tppp3-203ENSMUST00000177126 1396 ntAPPRIS P1 TSL 3 BASIC12.31□□□□□ -0.44
Col6a4A2AX52 Platr12-202ENSMUST00000189722 549 ntTSL 3 BASIC12.31□□□□□ -0.44
Col6a4A2AX52 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Col6a4A2AX52 Gm42196-201ENSMUST00000209618 730 ntTSL 5 BASIC12.31□□□□□ -0.44
Col6a4A2AX52 Gm5035-201ENSMUST00000215581 927 ntBASIC12.31□□□□□ -0.44
Col6a4A2AX52 AC164567.1-201ENSMUST00000219185 960 ntBASIC12.31□□□□□ -0.44
Col6a4A2AX52 AC154687.2-201ENSMUST00000223853 640 ntBASIC12.31□□□□□ -0.44
Col6a4A2AX52 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Col6a4A2AX52 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Col6a4A2AX52 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Col6a4A2AX52 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Col6a4A2AX52 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Col6a4A2AX52 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC12.31□□□□□ -0.44
Col6a4A2AX52 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Col6a4A2AX52 Pcsk6-202ENSMUST00000098391 4207 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Col6a4A2AX52 Prdm4-201ENSMUST00000037646 3877 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 32.7 ms