Protein–RNA interactions for Protein: A0AUP1

Ccdc112, Coiled-coil domain-containing protein 112, mousemouse

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc112A0AUP1 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ccdc112A0AUP1 Phtf2-201ENSMUST00000118174 4840 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ccdc112A0AUP1 Map6-204ENSMUST00000127492 4920 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ccdc112A0AUP1 Fbln7-201ENSMUST00000028864 2905 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ccdc112A0AUP1 Gm13344-201ENSMUST00000137714 1557 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Ccdc112A0AUP1 Rbm33-202ENSMUST00000059644 9510 ntAPPRIS P2 TSL 5 BASIC16.73■□□□□ 0.27
Ccdc112A0AUP1 Grm7-201ENSMUST00000071076 3127 ntAPPRIS ALT1 TSL 5 BASIC16.73■□□□□ 0.27
Ccdc112A0AUP1 Mbp-204ENSMUST00000080658 2063 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Ccdc112A0AUP1 Map3k5-202ENSMUST00000120259 4289 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ccdc112A0AUP1 Ccnt2-202ENSMUST00000112570 4511 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ccdc112A0AUP1 Gm21983-201ENSMUST00000154724 1690 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
Ccdc112A0AUP1 Abi2-206ENSMUST00000188594 1658 ntTSL 5 BASIC16.73■□□□□ 0.27
Ccdc112A0AUP1 Dlg1-201ENSMUST00000023454 3725 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Ccdc112A0AUP1 Midn-201ENSMUST00000042057 3727 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ccdc112A0AUP1 Pglyrp2-201ENSMUST00000114455 1915 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ccdc112A0AUP1 Sirpa-202ENSMUST00000099113 3342 ntTSL 3 BASIC16.73■□□□□ 0.27
Ccdc112A0AUP1 Foxp2-207ENSMUST00000115477 6760 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ccdc112A0AUP1 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC16.73■□□□□ 0.27
Ccdc112A0AUP1 Cbx6-201ENSMUST00000109623 996 ntTSL 5 BASIC16.73■□□□□ 0.27
Ccdc112A0AUP1 Gm15406-202ENSMUST00000202229 767 ntTSL 2 BASIC16.73■□□□□ 0.27
Ccdc112A0AUP1 Zfp810-203ENSMUST00000215202 822 ntTSL 3 BASIC16.73■□□□□ 0.27
Ccdc112A0AUP1 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ccdc112A0AUP1 6030498E09Rik-201ENSMUST00000050744 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ccdc112A0AUP1 Lce1l-201ENSMUST00000054426 670 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ccdc112A0AUP1 Spsb1-203ENSMUST00000105685 1537 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ccdc112A0AUP1 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ccdc112A0AUP1 Ntng2-201ENSMUST00000048455 1770 ntAPPRIS P4 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ccdc112A0AUP1 C230004F18Rik-203ENSMUST00000137153 2138 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Ccdc112A0AUP1 Pxn-213ENSMUST00000202564 2126 ntTSL 5 BASIC16.73■□□□□ 0.27
Ccdc112A0AUP1 Gm43951-201ENSMUST00000204457 2889 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
Ccdc112A0AUP1 Khdrbs1-201ENSMUST00000066257 3738 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ccdc112A0AUP1 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ccdc112A0AUP1 AI606473-201ENSMUST00000177201 1731 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Ccdc112A0AUP1 Ralyl-206ENSMUST00000193117 2933 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
Ccdc112A0AUP1 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Ccdc112A0AUP1 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Ccdc112A0AUP1 Myl12a-206ENSMUST00000148960 1937 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Ccdc112A0AUP1 Slc43a1-201ENSMUST00000028469 2539 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Ccdc112A0AUP1 AC126250.1-201ENSMUST00000228343 1768 ntBASIC16.72■□□□□ 0.27
Ccdc112A0AUP1 Kcnq2-220ENSMUST00000197015 8031 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
Ccdc112A0AUP1 Spg20-201ENSMUST00000044116 3770 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
Ccdc112A0AUP1 Apol8-202ENSMUST00000089450 2498 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
Ccdc112A0AUP1 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC16.72■□□□□ 0.27
Ccdc112A0AUP1 Adamts7-201ENSMUST00000113059 5379 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
Ccdc112A0AUP1 Tgfbr3-201ENSMUST00000031224 6087 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Ccdc112A0AUP1 Shroom3-202ENSMUST00000113054 6401 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Ccdc112A0AUP1 Kctd3-201ENSMUST00000085678 3706 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Ccdc112A0AUP1 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC16.72■□□□□ 0.27
Ccdc112A0AUP1 Rps2-ps5-201ENSMUST00000184266 849 ntBASIC16.72■□□□□ 0.27
Ccdc112A0AUP1 Gm17971-201ENSMUST00000190239 806 ntBASIC16.72■□□□□ 0.27
Ccdc112A0AUP1 Gm42670-201ENSMUST00000201816 1292 ntBASIC16.72■□□□□ 0.27
Ccdc112A0AUP1 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC16.72■□□□□ 0.27
Ccdc112A0AUP1 Ndufs6-204ENSMUST00000223293 757 ntTSL 2 BASIC16.72■□□□□ 0.27
Ccdc112A0AUP1 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC16.72■□□□□ 0.27
Ccdc112A0AUP1 Fgfr1op2-201ENSMUST00000037836 687 ntTSL 3 BASIC16.72■□□□□ 0.27
Ccdc112A0AUP1 Rph3al-202ENSMUST00000066504 988 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Ccdc112A0AUP1 Ctnnd2-203ENSMUST00000226119 4111 ntAPPRIS ALT2 BASIC16.72■□□□□ 0.27
Ccdc112A0AUP1 9330182L06Rik-202ENSMUST00000115348 3403 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Ccdc112A0AUP1 Rtkn-202ENSMUST00000087938 3080 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
Ccdc112A0AUP1 Mlkl-201ENSMUST00000056157 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Ccdc112A0AUP1 Pak1-205ENSMUST00000206984 2794 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
Ccdc112A0AUP1 Wdfy3-206ENSMUST00000174698 3858 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Ccdc112A0AUP1 Tex13a-201ENSMUST00000096314 1317 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Ccdc112A0AUP1 Tmem30b-201ENSMUST00000042975 2991 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
Ccdc112A0AUP1 Arid4b-201ENSMUST00000039538 5844 ntTSL 5 BASIC16.71■□□□□ 0.27
Ccdc112A0AUP1 Ggh-201ENSMUST00000098242 1965 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Ccdc112A0AUP1 Sesn1-201ENSMUST00000041438 2600 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
Ccdc112A0AUP1 Pard3-202ENSMUST00000079777 3394 ntTSL 5 BASIC16.71■□□□□ 0.27
Ccdc112A0AUP1 Ly6h-207ENSMUST00000163116 2801 ntAPPRIS ALT1 TSL 2 BASIC16.71■□□□□ 0.27
Ccdc112A0AUP1 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Ccdc112A0AUP1 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Ccdc112A0AUP1 Kif1c-203ENSMUST00000102554 6684 ntAPPRIS P2 TSL 5 BASIC16.71■□□□□ 0.27
Ccdc112A0AUP1 Rasl12-202ENSMUST00000165682 1903 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Ccdc112A0AUP1 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC16.71■□□□□ 0.27
Ccdc112A0AUP1 Gm12981-201ENSMUST00000131733 622 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Ccdc112A0AUP1 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Ccdc112A0AUP1 AC131709.1-201ENSMUST00000224731 1180 ntBASIC16.71■□□□□ 0.27
Ccdc112A0AUP1 1700080E11Rik-201ENSMUST00000035180 883 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Ccdc112A0AUP1 Trim32-201ENSMUST00000050850 3194 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Ccdc112A0AUP1 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC16.71■□□□□ 0.27
Ccdc112A0AUP1 Fgfr2-207ENSMUST00000117872 4223 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Ccdc112A0AUP1 Guca1b-201ENSMUST00000024774 1668 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Ccdc112A0AUP1 Skap1-205ENSMUST00000107662 1861 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Ccdc112A0AUP1 Tubb3-201ENSMUST00000071134 1868 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Ccdc112A0AUP1 Slc43a1-203ENSMUST00000111625 2487 ntAPPRIS P4 TSL 1 (best) BASIC16.71■□□□□ 0.26
Ccdc112A0AUP1 Lifr-201ENSMUST00000067190 4143 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.26
Ccdc112A0AUP1 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Ccdc112A0AUP1 Snai3-201ENSMUST00000006762 1628 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Ccdc112A0AUP1 Tex44-201ENSMUST00000046004 1724 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
Ccdc112A0AUP1 Col9a2-201ENSMUST00000030372 2924 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Ccdc112A0AUP1 Zfp606-201ENSMUST00000098822 4748 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
Ccdc112A0AUP1 Eef2kmt-201ENSMUST00000064635 2170 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Ccdc112A0AUP1 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
Ccdc112A0AUP1 Tcf21-202ENSMUST00000218002 1788 ntBASIC16.7■□□□□ 0.26
Ccdc112A0AUP1 Rnf152-201ENSMUST00000058688 8492 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Ccdc112A0AUP1 Gm26688-201ENSMUST00000181176 1568 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Ccdc112A0AUP1 Papd5-203ENSMUST00000119033 4624 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Ccdc112A0AUP1 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Ccdc112A0AUP1 Nme1-202ENSMUST00000107844 452 ntTSL 3 BASIC16.7■□□□□ 0.26
Ccdc112A0AUP1 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC16.7■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 45.5 ms