Protein–RNA interactions for Protein: A0A0G2JFS9

Atg4a-ps, Cysteine protease, mousemouse

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atg4a-psA0A0G2JFS9 Pcp2-202ENSMUST00000128566 1447 ntAPPRIS ALT2 TSL 2 BASIC17.78■□□□□ 0.44
Atg4a-psA0A0G2JFS9 Hsp90b1-201ENSMUST00000020238 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Atg4a-psA0A0G2JFS9 Hps1-204ENSMUST00000160455 2952 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Atg4a-psA0A0G2JFS9 Jakmip1-212ENSMUST00000174629 1941 ntTSL 5 BASIC17.78■□□□□ 0.44
Atg4a-psA0A0G2JFS9 Fbxo8-202ENSMUST00000110322 1709 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Atg4a-psA0A0G2JFS9 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Atg4a-psA0A0G2JFS9 Tepsin-203ENSMUST00000106225 2566 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
Atg4a-psA0A0G2JFS9 Fbxl4-201ENSMUST00000039234 2546 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Atg4a-psA0A0G2JFS9 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Atg4a-psA0A0G2JFS9 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Atg4a-psA0A0G2JFS9 Cc2d1b-201ENSMUST00000030320 3303 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Atg4a-psA0A0G2JFS9 Exoc3l-201ENSMUST00000057855 2497 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Atg4a-psA0A0G2JFS9 Msi1-208ENSMUST00000150779 3133 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Atg4a-psA0A0G2JFS9 Tex13b-201ENSMUST00000044179 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Atg4a-psA0A0G2JFS9 Gm6756-201ENSMUST00000180647 1620 ntBASIC17.77■□□□□ 0.44
Atg4a-psA0A0G2JFS9 Mcrs1-201ENSMUST00000041190 1915 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Atg4a-psA0A0G2JFS9 Evx1-202ENSMUST00000129243 1034 ntTSL 3 BASIC17.77■□□□□ 0.44
Atg4a-psA0A0G2JFS9 U2af1l4-216ENSMUST00000166510 835 ntTSL 5 BASIC17.77■□□□□ 0.44
Atg4a-psA0A0G2JFS9 Ankrd13d-204ENSMUST00000167215 639 ntTSL 3 BASIC17.77■□□□□ 0.44
Atg4a-psA0A0G2JFS9 Gm20481-201ENSMUST00000173680 564 ntAPPRIS P1 TSL 3 BASIC17.77■□□□□ 0.44
Atg4a-psA0A0G2JFS9 Gm24513-201ENSMUST00000174964 138 ntBASIC17.77■□□□□ 0.44
Atg4a-psA0A0G2JFS9 Cdipt-205ENSMUST00000206450 951 ntTSL 5 BASIC17.77■□□□□ 0.44
Atg4a-psA0A0G2JFS9 Cd3g-201ENSMUST00000002101 1023 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Atg4a-psA0A0G2JFS9 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Atg4a-psA0A0G2JFS9 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Atg4a-psA0A0G2JFS9 Sept8-202ENSMUST00000117061 4563 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
Atg4a-psA0A0G2JFS9 Pdk1-201ENSMUST00000006669 5185 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Atg4a-psA0A0G2JFS9 Sema3b-204ENSMUST00000102531 2958 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Atg4a-psA0A0G2JFS9 Zfp668-204ENSMUST00000106263 3132 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Atg4a-psA0A0G2JFS9 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Atg4a-psA0A0G2JFS9 Grm6-204ENSMUST00000171427 4330 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.43
Atg4a-psA0A0G2JFS9 Kcnq2-202ENSMUST00000049792 2920 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
Atg4a-psA0A0G2JFS9 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.43
Atg4a-psA0A0G2JFS9 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.43
Atg4a-psA0A0G2JFS9 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
Atg4a-psA0A0G2JFS9 Map2k6-201ENSMUST00000020949 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Atg4a-psA0A0G2JFS9 Hnrnpul1-205ENSMUST00000206832 3784 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Atg4a-psA0A0G2JFS9 Scrt1-201ENSMUST00000096365 4010 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Atg4a-psA0A0G2JFS9 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Atg4a-psA0A0G2JFS9 Gm14042-201ENSMUST00000120139 833 ntBASIC17.76■□□□□ 0.43
Atg4a-psA0A0G2JFS9 1190007I07Rik-202ENSMUST00000176200 586 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
Atg4a-psA0A0G2JFS9 1190007I07Rik-203ENSMUST00000183363 406 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Atg4a-psA0A0G2JFS9 Fam71e1-204ENSMUST00000205422 366 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Atg4a-psA0A0G2JFS9 Gm45208-202ENSMUST00000208156 1153 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
Atg4a-psA0A0G2JFS9 Atf5-203ENSMUST00000209072 595 ntTSL 5 BASIC17.76■□□□□ 0.43
Atg4a-psA0A0G2JFS9 5830408C22Rik-201ENSMUST00000210072 1115 ntTSL 5 BASIC17.76■□□□□ 0.43
Atg4a-psA0A0G2JFS9 AC155729.1-201ENSMUST00000227758 544 ntBASIC17.76■□□□□ 0.43
Atg4a-psA0A0G2JFS9 Gnpat-201ENSMUST00000034466 2984 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Atg4a-psA0A0G2JFS9 Tssk3-201ENSMUST00000000421 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Atg4a-psA0A0G2JFS9 Lce3b-201ENSMUST00000046234 562 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Atg4a-psA0A0G2JFS9 Gm9898-201ENSMUST00000065469 1161 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Atg4a-psA0A0G2JFS9 1190007I07Rik-201ENSMUST00000079648 716 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Atg4a-psA0A0G2JFS9 Ap4b1-202ENSMUST00000076599 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Atg4a-psA0A0G2JFS9 Tmem204-201ENSMUST00000024984 1846 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Atg4a-psA0A0G2JFS9 Ap5m1-205ENSMUST00000227431 3757 ntBASIC17.76■□□□□ 0.43
Atg4a-psA0A0G2JFS9 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Atg4a-psA0A0G2JFS9 Fam169b-201ENSMUST00000098378 2776 ntTSL 5 BASIC17.76■□□□□ 0.43
Atg4a-psA0A0G2JFS9 Acr-201ENSMUST00000023295 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Atg4a-psA0A0G2JFS9 Gata1-201ENSMUST00000033502 1902 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Atg4a-psA0A0G2JFS9 Dnmt3a-205ENSMUST00000172689 2328 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
Atg4a-psA0A0G2JFS9 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Atg4a-psA0A0G2JFS9 Zpbp2-201ENSMUST00000017339 1455 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
Atg4a-psA0A0G2JFS9 Kif3a-201ENSMUST00000057330 2290 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Atg4a-psA0A0G2JFS9 Plekha1-201ENSMUST00000048180 3321 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Atg4a-psA0A0G2JFS9 Adam9-202ENSMUST00000084035 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Atg4a-psA0A0G2JFS9 Mcm9-201ENSMUST00000075540 4882 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
Atg4a-psA0A0G2JFS9 Spg20-201ENSMUST00000044116 3770 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
Atg4a-psA0A0G2JFS9 Pkn2-201ENSMUST00000043812 6207 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Atg4a-psA0A0G2JFS9 Fam172a-203ENSMUST00000163257 1436 ntAPPRIS P4 TSL 5 BASIC17.75■□□□□ 0.43
Atg4a-psA0A0G2JFS9 Ints14-201ENSMUST00000037504 2837 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Atg4a-psA0A0G2JFS9 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
Atg4a-psA0A0G2JFS9 Slc35a2-202ENSMUST00000115660 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Atg4a-psA0A0G2JFS9 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
Atg4a-psA0A0G2JFS9 Gm11788-201ENSMUST00000142520 562 ntTSL 3 BASIC17.75■□□□□ 0.43
Atg4a-psA0A0G2JFS9 Dpf3-205ENSMUST00000177801 1092 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Atg4a-psA0A0G2JFS9 Gm27397-201ENSMUST00000184997 107 ntBASIC17.75■□□□□ 0.43
Atg4a-psA0A0G2JFS9 4930573H18Rik-201ENSMUST00000197696 906 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Atg4a-psA0A0G2JFS9 Pomc-201ENSMUST00000020990 1031 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Atg4a-psA0A0G2JFS9 Chchd1-203ENSMUST00000224633 557 ntBASIC17.75■□□□□ 0.43
Atg4a-psA0A0G2JFS9 Trem2-201ENSMUST00000024791 1088 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
Atg4a-psA0A0G2JFS9 Il31-201ENSMUST00000031389 806 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Atg4a-psA0A0G2JFS9 Rxfp4-201ENSMUST00000063119 1245 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
Atg4a-psA0A0G2JFS9 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC17.75■□□□□ 0.43
Atg4a-psA0A0G2JFS9 Slc27a1-201ENSMUST00000034267 2795 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Atg4a-psA0A0G2JFS9 G3bp2-209ENSMUST00000202258 1884 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
Atg4a-psA0A0G2JFS9 Wdr70-201ENSMUST00000045766 2126 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Atg4a-psA0A0G2JFS9 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Atg4a-psA0A0G2JFS9 Prss44-201ENSMUST00000098345 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Atg4a-psA0A0G2JFS9 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Atg4a-psA0A0G2JFS9 Bcan-201ENSMUST00000090971 3141 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Atg4a-psA0A0G2JFS9 Zbtb7b-204ENSMUST00000107435 4333 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Atg4a-psA0A0G2JFS9 Dzip1-201ENSMUST00000004055 4079 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Atg4a-psA0A0G2JFS9 Pcyox1l-201ENSMUST00000025472 2017 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Atg4a-psA0A0G2JFS9 Nr2e3-201ENSMUST00000034831 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Atg4a-psA0A0G2JFS9 Add1-203ENSMUST00000114335 4547 ntTSL 5 BASIC17.74■□□□□ 0.43
Atg4a-psA0A0G2JFS9 Akt2-ps-201ENSMUST00000120718 1449 ntBASIC17.74■□□□□ 0.43
Atg4a-psA0A0G2JFS9 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Atg4a-psA0A0G2JFS9 Sympk-201ENSMUST00000023882 4116 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Atg4a-psA0A0G2JFS9 Tdrp-201ENSMUST00000062613 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Atg4a-psA0A0G2JFS9 Dnm1-217ENSMUST00000202578 2820 ntAPPRIS P2 TSL 5 BASIC17.74■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 55.8 ms