Protein–RNA interactions for Protein: A0A0B4J1F6

BC053393, cDNA sequence BC053393, mousemouse

Predictions only

Length 192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BC053393A0A0B4J1F6 Tmc8-201ENSMUST00000050874 2577 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
BC053393A0A0B4J1F6 Pcdha11-201ENSMUST00000115658 5359 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
BC053393A0A0B4J1F6 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
BC053393A0A0B4J1F6 Rinl-206ENSMUST00000209035 2898 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
BC053393A0A0B4J1F6 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
BC053393A0A0B4J1F6 Mfsd1-201ENSMUST00000029344 3011 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
BC053393A0A0B4J1F6 Otud4-203ENSMUST00000173286 7213 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
BC053393A0A0B4J1F6 Nav1-207ENSMUST00000190298 8557 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
BC053393A0A0B4J1F6 Tfpt-202ENSMUST00000108641 1166 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
BC053393A0A0B4J1F6 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
BC053393A0A0B4J1F6 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC11.73□□□□□ -0.53
BC053393A0A0B4J1F6 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC11.73□□□□□ -0.53
BC053393A0A0B4J1F6 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
BC053393A0A0B4J1F6 Igsf8-204ENSMUST00000139528 2866 ntTSL 2 BASIC11.73□□□□□ -0.53
BC053393A0A0B4J1F6 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC11.73□□□□□ -0.53
BC053393A0A0B4J1F6 Echdc1-202ENSMUST00000160399 1845 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
BC053393A0A0B4J1F6 Tle3-210ENSMUST00000161207 2592 ntTSL 5 BASIC11.73□□□□□ -0.53
BC053393A0A0B4J1F6 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
BC053393A0A0B4J1F6 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
BC053393A0A0B4J1F6 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC11.73□□□□□ -0.53
BC053393A0A0B4J1F6 Robo4-205ENSMUST00000214185 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
BC053393A0A0B4J1F6 AC093926.2-201ENSMUST00000214468 1228 ntBASIC11.73□□□□□ -0.53
BC053393A0A0B4J1F6 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC11.73□□□□□ -0.53
BC053393A0A0B4J1F6 St8sia3-201ENSMUST00000025477 6282 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
BC053393A0A0B4J1F6 Tbrg4-201ENSMUST00000000394 2290 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
BC053393A0A0B4J1F6 Cd3eap-201ENSMUST00000047036 2239 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
BC053393A0A0B4J1F6 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC11.73□□□□□ -0.53
BC053393A0A0B4J1F6 Sh2b3-202ENSMUST00000086310 4195 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
BC053393A0A0B4J1F6 Rtkn-202ENSMUST00000087938 3080 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
BC053393A0A0B4J1F6 Cbln4-201ENSMUST00000087950 2902 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
BC053393A0A0B4J1F6 Tgif2-201ENSMUST00000073352 2690 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
BC053393A0A0B4J1F6 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
BC053393A0A0B4J1F6 Marveld3-202ENSMUST00000051430 2447 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
BC053393A0A0B4J1F6 Zfp319-201ENSMUST00000057717 7232 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
BC053393A0A0B4J1F6 Tpgs2-201ENSMUST00000115817 4159 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
BC053393A0A0B4J1F6 Cpne6-202ENSMUST00000163767 2004 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
BC053393A0A0B4J1F6 Sphk1-205ENSMUST00000106387 1957 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
BC053393A0A0B4J1F6 Rasl12-202ENSMUST00000165682 1903 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
BC053393A0A0B4J1F6 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC11.72□□□□□ -0.53
BC053393A0A0B4J1F6 Selenon-201ENSMUST00000060435 3445 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
BC053393A0A0B4J1F6 Dnase1l1-201ENSMUST00000019232 1625 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
BC053393A0A0B4J1F6 Akap17b-201ENSMUST00000051906 6003 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
BC053393A0A0B4J1F6 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC11.72□□□□□ -0.53
BC053393A0A0B4J1F6 Chtf8-202ENSMUST00000175940 2890 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
BC053393A0A0B4J1F6 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
BC053393A0A0B4J1F6 Yap1-201ENSMUST00000065353 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
BC053393A0A0B4J1F6 Gm26732-201ENSMUST00000181807 2771 ntTSL 5 BASIC11.72□□□□□ -0.53
BC053393A0A0B4J1F6 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC11.72□□□□□ -0.53
BC053393A0A0B4J1F6 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
BC053393A0A0B4J1F6 Dctn1-201ENSMUST00000077407 4118 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
BC053393A0A0B4J1F6 Cdsn-201ENSMUST00000044804 2678 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
BC053393A0A0B4J1F6 Rgs6-216ENSMUST00000200911 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
BC053393A0A0B4J1F6 Rcbtb1-202ENSMUST00000043227 3903 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
BC053393A0A0B4J1F6 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC11.72□□□□□ -0.53
BC053393A0A0B4J1F6 Gm16183-201ENSMUST00000127527 1193 ntTSL 5 BASIC11.72□□□□□ -0.53
BC053393A0A0B4J1F6 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC11.72□□□□□ -0.53
BC053393A0A0B4J1F6 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
BC053393A0A0B4J1F6 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC11.72□□□□□ -0.53
BC053393A0A0B4J1F6 Gm6296-201ENSMUST00000222599 943 ntBASIC11.72□□□□□ -0.53
BC053393A0A0B4J1F6 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
BC053393A0A0B4J1F6 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
BC053393A0A0B4J1F6 Map7d1-201ENSMUST00000061143 3351 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
BC053393A0A0B4J1F6 Fstl4-201ENSMUST00000036796 4380 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
BC053393A0A0B4J1F6 Cnih4-203ENSMUST00000111059 3127 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
BC053393A0A0B4J1F6 Ctnnd2-203ENSMUST00000226119 4111 ntAPPRIS ALT2 BASIC11.72□□□□□ -0.53
BC053393A0A0B4J1F6 Lrp8os2-204ENSMUST00000188737 3078 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
BC053393A0A0B4J1F6 Gm11946-201ENSMUST00000123459 3941 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
BC053393A0A0B4J1F6 Dido1-202ENSMUST00000087517 8723 ntAPPRIS P4 TSL 1 (best) BASIC11.72□□□□□ -0.53
BC053393A0A0B4J1F6 Igf2os-203ENSMUST00000141681 4778 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
BC053393A0A0B4J1F6 Trim2-203ENSMUST00000107691 7428 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
BC053393A0A0B4J1F6 Atp2a3-207ENSMUST00000163326 4606 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
BC053393A0A0B4J1F6 Npnt-204ENSMUST00000117164 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
BC053393A0A0B4J1F6 N4bp3-201ENSMUST00000001080 2367 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
BC053393A0A0B4J1F6 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
BC053393A0A0B4J1F6 P2rx6-201ENSMUST00000023441 2345 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
BC053393A0A0B4J1F6 Ctu2-201ENSMUST00000116412 3066 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
BC053393A0A0B4J1F6 Kcnh4-201ENSMUST00000107361 3748 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.53
BC053393A0A0B4J1F6 Vasp-201ENSMUST00000032561 2215 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
BC053393A0A0B4J1F6 Spns1-201ENSMUST00000032994 2219 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
BC053393A0A0B4J1F6 Emb-201ENSMUST00000022242 2923 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
BC053393A0A0B4J1F6 Col9a2-201ENSMUST00000030372 2924 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
BC053393A0A0B4J1F6 Tbx3-201ENSMUST00000018748 4856 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
BC053393A0A0B4J1F6 Chrna4-202ENSMUST00000108851 2071 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.53
BC053393A0A0B4J1F6 Aggf1-201ENSMUST00000022189 3249 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
BC053393A0A0B4J1F6 Rhpn1-201ENSMUST00000023244 1932 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.53
BC053393A0A0B4J1F6 Gm24589-201ENSMUST00000116692 94 ntBASIC11.71□□□□□ -0.53
BC053393A0A0B4J1F6 Gm13418-201ENSMUST00000119097 944 ntBASIC11.71□□□□□ -0.53
BC053393A0A0B4J1F6 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
BC053393A0A0B4J1F6 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC11.71□□□□□ -0.53
BC053393A0A0B4J1F6 Gm27646-201ENSMUST00000183989 110 ntBASIC11.71□□□□□ -0.53
BC053393A0A0B4J1F6 Gm44357-201ENSMUST00000195897 142 ntBASIC11.71□□□□□ -0.53
BC053393A0A0B4J1F6 Gm19658-201ENSMUST00000196231 138 ntBASIC11.71□□□□□ -0.53
BC053393A0A0B4J1F6 Gm44367-201ENSMUST00000196836 138 ntBASIC11.71□□□□□ -0.53
BC053393A0A0B4J1F6 Gm44350-201ENSMUST00000197197 138 ntBASIC11.71□□□□□ -0.53
BC053393A0A0B4J1F6 Gm44390-201ENSMUST00000197533 144 ntBASIC11.71□□□□□ -0.53
BC053393A0A0B4J1F6 Gm44313-201ENSMUST00000198018 138 ntBASIC11.71□□□□□ -0.53
BC053393A0A0B4J1F6 Gm44486-201ENSMUST00000198508 138 ntBASIC11.71□□□□□ -0.53
BC053393A0A0B4J1F6 Gm44314-201ENSMUST00000199263 138 ntBASIC11.71□□□□□ -0.53
BC053393A0A0B4J1F6 Gm44394-201ENSMUST00000199558 138 ntBASIC11.71□□□□□ -0.53
BC053393A0A0B4J1F6 Gm44484-201ENSMUST00000199873 138 ntBASIC11.71□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 36.4 ms