Protein–RNA interactions for Protein: A0A075B6B5

Trav6-5, T cell receptor alpha variable 6-5 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-5A0A075B6B5 Nkain3-202ENSMUST00000119374 4567 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav6-5A0A075B6B5 Erg-203ENSMUST00000113848 2139 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Trav6-5A0A075B6B5 Mfng-201ENSMUST00000018313 1865 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav6-5A0A075B6B5 Gm30238-201ENSMUST00000195528 2603 ntBASIC11.32□□□□□ -0.6
Trav6-5A0A075B6B5 Wdr73-201ENSMUST00000026816 2114 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav6-5A0A075B6B5 Gm10110-201ENSMUST00000081204 1891 ntTSL 5 BASIC11.32□□□□□ -0.6
Trav6-5A0A075B6B5 Usp1-202ENSMUST00000091358 3527 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav6-5A0A075B6B5 Nop9-201ENSMUST00000019441 3694 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav6-5A0A075B6B5 Dapk1-201ENSMUST00000044083 5304 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav6-5A0A075B6B5 E130317F20Rik-202ENSMUST00000217802 3420 ntBASIC11.32□□□□□ -0.6
Trav6-5A0A075B6B5 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav6-5A0A075B6B5 Skida1-201ENSMUST00000066885 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav6-5A0A075B6B5 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC11.32□□□□□ -0.6
Trav6-5A0A075B6B5 Trav13-3-201ENSMUST00000117226 336 ntBASIC11.32□□□□□ -0.6
Trav6-5A0A075B6B5 Gm9013-201ENSMUST00000132939 882 ntBASIC11.32□□□□□ -0.6
Trav6-5A0A075B6B5 Gm12497-201ENSMUST00000138778 237 ntBASIC11.32□□□□□ -0.6
Trav6-5A0A075B6B5 Gm10499-201ENSMUST00000174094 934 ntBASIC11.32□□□□□ -0.6
Trav6-5A0A075B6B5 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Trav6-5A0A075B6B5 Gm44454-201ENSMUST00000198541 138 ntBASIC11.32□□□□□ -0.6
Trav6-5A0A075B6B5 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC11.32□□□□□ -0.6
Trav6-5A0A075B6B5 Tbkbp1-201ENSMUST00000066078 3338 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
Trav6-5A0A075B6B5 Usf1-208ENSMUST00000161241 2167 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav6-5A0A075B6B5 Haus5-201ENSMUST00000019697 2187 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav6-5A0A075B6B5 Pglyrp2-201ENSMUST00000114455 1915 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav6-5A0A075B6B5 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav6-5A0A075B6B5 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav6-5A0A075B6B5 Erc1-207ENSMUST00000183911 3865 ntTSL 5 BASIC11.32□□□□□ -0.6
Trav6-5A0A075B6B5 Zfp365-201ENSMUST00000064656 4259 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav6-5A0A075B6B5 Dhx57-201ENSMUST00000038166 4918 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav6-5A0A075B6B5 Zfp467-203ENSMUST00000114558 3115 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Trav6-5A0A075B6B5 Hmx2-201ENSMUST00000051997 3102 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav6-5A0A075B6B5 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav6-5A0A075B6B5 Rab37-201ENSMUST00000021076 2210 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav6-5A0A075B6B5 Mcur1-201ENSMUST00000021800 4339 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav6-5A0A075B6B5 Ilvbl-208ENSMUST00000218875 3020 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Trav6-5A0A075B6B5 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav6-5A0A075B6B5 Lhx1-201ENSMUST00000018842 3846 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav6-5A0A075B6B5 Sema3b-205ENSMUST00000102532 3191 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav6-5A0A075B6B5 Opa1-206ENSMUST00000160597 6230 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav6-5A0A075B6B5 Fam19a2-201ENSMUST00000050756 4364 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav6-5A0A075B6B5 Islr2-201ENSMUST00000114144 3880 ntAPPRIS P3 TSL 2 BASIC11.32□□□□□ -0.6
Trav6-5A0A075B6B5 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Trav6-5A0A075B6B5 Tial1-203ENSMUST00000106228 2835 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Trav6-5A0A075B6B5 Yap1-201ENSMUST00000065353 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav6-5A0A075B6B5 Snai3-201ENSMUST00000006762 1628 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav6-5A0A075B6B5 Zbtb45-202ENSMUST00000172240 2722 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav6-5A0A075B6B5 Col6a2-202ENSMUST00000105413 4653 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Trav6-5A0A075B6B5 5330406M23Rik-201ENSMUST00000195672 2094 ntBASIC11.31□□□□□ -0.6
Trav6-5A0A075B6B5 Tmem19-203ENSMUST00000217884 2799 ntTSL 5 BASIC11.31□□□□□ -0.6
Trav6-5A0A075B6B5 Rnf10-203ENSMUST00000112097 3476 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav6-5A0A075B6B5 Zbed4-201ENSMUST00000041297 5425 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav6-5A0A075B6B5 Syngr1-201ENSMUST00000009727 4180 ntAPPRIS P4 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav6-5A0A075B6B5 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC11.31□□□□□ -0.6
Trav6-5A0A075B6B5 Serinc5-201ENSMUST00000049488 5366 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav6-5A0A075B6B5 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC11.31□□□□□ -0.6
Trav6-5A0A075B6B5 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav6-5A0A075B6B5 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC11.31□□□□□ -0.6
Trav6-5A0A075B6B5 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Trav6-5A0A075B6B5 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Trav6-5A0A075B6B5 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC11.31□□□□□ -0.6
Trav6-5A0A075B6B5 Gm7889-201ENSMUST00000185591 958 ntBASIC11.31□□□□□ -0.6
Trav6-5A0A075B6B5 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC11.31□□□□□ -0.6
Trav6-5A0A075B6B5 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Trav6-5A0A075B6B5 Pxn-213ENSMUST00000202564 2126 ntTSL 5 BASIC11.31□□□□□ -0.6
Trav6-5A0A075B6B5 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC11.31□□□□□ -0.6
Trav6-5A0A075B6B5 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav6-5A0A075B6B5 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav6-5A0A075B6B5 Hdgfl2-212ENSMUST00000226053 2270 ntAPPRIS P2 BASIC11.31□□□□□ -0.6
Trav6-5A0A075B6B5 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav6-5A0A075B6B5 Macrod2-204ENSMUST00000110062 3554 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Trav6-5A0A075B6B5 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav6-5A0A075B6B5 Mettl2-201ENSMUST00000021030 1867 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav6-5A0A075B6B5 Gm42878-202ENSMUST00000200170 4783 ntAPPRIS P1 TSL 2 BASIC11.31□□□□□ -0.6
Trav6-5A0A075B6B5 Gm26559-201ENSMUST00000181939 2481 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Trav6-5A0A075B6B5 Adat1-203ENSMUST00000139820 2762 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Trav6-5A0A075B6B5 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Trav6-5A0A075B6B5 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav6-5A0A075B6B5 Uros-203ENSMUST00000106145 1644 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav6-5A0A075B6B5 Comt-202ENSMUST00000115609 1786 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav6-5A0A075B6B5 Psmd12-201ENSMUST00000021063 1904 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav6-5A0A075B6B5 Hsd17b11-202ENSMUST00000119025 2234 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Trav6-5A0A075B6B5 Esrrb-202ENSMUST00000110203 2363 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Trav6-5A0A075B6B5 Noct-203ENSMUST00000167780 2992 ntAPPRIS P2 TSL 5 BASIC11.31□□□□□ -0.6
Trav6-5A0A075B6B5 March8-213ENSMUST00000203193 4245 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Trav6-5A0A075B6B5 Stk16-201ENSMUST00000027401 2876 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav6-5A0A075B6B5 Tcirg1-211ENSMUST00000145791 2729 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav6-5A0A075B6B5 Mapk8-201ENSMUST00000022504 2587 ntAPPRIS P5 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav6-5A0A075B6B5 Mfn2-202ENSMUST00000105714 2427 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Trav6-5A0A075B6B5 Larp4b-202ENSMUST00000188211 5610 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav6-5A0A075B6B5 Mavs-202ENSMUST00000110199 3057 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav6-5A0A075B6B5 Gigyf2-201ENSMUST00000027475 5724 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav6-5A0A075B6B5 Dlgap3-201ENSMUST00000046659 3884 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav6-5A0A075B6B5 Ncor2-206ENSMUST00000111402 8862 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
Trav6-5A0A075B6B5 Pfkfb3-203ENSMUST00000100411 2008 ntTSL 5 BASIC11.3□□□□□ -0.6
Trav6-5A0A075B6B5 Men1-207ENSMUST00000113503 1851 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
Trav6-5A0A075B6B5 Fbxo3-201ENSMUST00000028603 4740 ntAPPRIS P4 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav6-5A0A075B6B5 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav6-5A0A075B6B5 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav6-5A0A075B6B5 Gm11453-201ENSMUST00000117318 1007 ntBASIC11.3□□□□□ -0.6
Trav6-5A0A075B6B5 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC11.3□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 39.9 ms