Protein–RNA interactions for Protein: A0A075B617

Trav16d-dv11, T cell receptor alpha variable 16D-DV11 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav16d-dv11A0A075B617 9930014A18Rik-201ENSMUST00000180730 3074 ntTSL 1 (best) BASIC10.77□□□□□ -0.68
Trav16d-dv11A0A075B617 Phf24-201ENSMUST00000069184 6392 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Trav16d-dv11A0A075B617 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Trav16d-dv11A0A075B617 Zfp142-203ENSMUST00000113737 7473 ntAPPRIS P3 TSL 1 (best) BASIC10.77□□□□□ -0.69
Trav16d-dv11A0A075B617 Gm12503-201ENSMUST00000146576 3127 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Trav16d-dv11A0A075B617 Apbb1-215ENSMUST00000190369 1882 ntTSL 5 BASIC10.77□□□□□ -0.69
Trav16d-dv11A0A075B617 Fam57b-202ENSMUST00000098032 1894 ntTSL 5 BASIC10.77□□□□□ -0.69
Trav16d-dv11A0A075B617 Syngr1-201ENSMUST00000009727 4180 ntAPPRIS P4 TSL 1 (best) BASIC10.77□□□□□ -0.69
Trav16d-dv11A0A075B617 Cux2-202ENSMUST00000111752 8784 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Trav16d-dv11A0A075B617 Gm42769-201ENSMUST00000198576 1659 ntBASIC10.77□□□□□ -0.69
Trav16d-dv11A0A075B617 Slc39a3-202ENSMUST00000117276 3796 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Trav16d-dv11A0A075B617 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Trav16d-dv11A0A075B617 Gm10653-202ENSMUST00000139570 835 ntBASIC10.77□□□□□ -0.69
Trav16d-dv11A0A075B617 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC10.77□□□□□ -0.69
Trav16d-dv11A0A075B617 Vdac2-209ENSMUST00000173456 956 ntAPPRIS ALT2 TSL 5 BASIC10.77□□□□□ -0.69
Trav16d-dv11A0A075B617 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC10.77□□□□□ -0.69
Trav16d-dv11A0A075B617 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC10.77□□□□□ -0.69
Trav16d-dv11A0A075B617 AC134329.2-201ENSMUST00000217897 428 ntBASIC10.77□□□□□ -0.69
Trav16d-dv11A0A075B617 AC158538.2-201ENSMUST00000225455 906 ntBASIC10.77□□□□□ -0.69
Trav16d-dv11A0A075B617 Ubiad1-201ENSMUST00000051633 2992 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Trav16d-dv11A0A075B617 Gm43056-201ENSMUST00000197865 2791 ntBASIC10.77□□□□□ -0.69
Trav16d-dv11A0A075B617 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Trav16d-dv11A0A075B617 Dnaaf5-201ENSMUST00000026975 3450 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Trav16d-dv11A0A075B617 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Trav16d-dv11A0A075B617 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC10.77□□□□□ -0.69
Trav16d-dv11A0A075B617 Tnpo2-202ENSMUST00000166592 4884 ntAPPRIS P1 TSL 5 BASIC10.77□□□□□ -0.69
Trav16d-dv11A0A075B617 Polg-201ENSMUST00000073889 7837 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Trav16d-dv11A0A075B617 4930556M19Rik-201ENSMUST00000180604 2468 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Trav16d-dv11A0A075B617 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Trav16d-dv11A0A075B617 Tmem220-201ENSMUST00000061786 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.69
Trav16d-dv11A0A075B617 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.69
Trav16d-dv11A0A075B617 Nptn-201ENSMUST00000085651 2024 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Trav16d-dv11A0A075B617 Sema3b-205ENSMUST00000102532 3191 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Trav16d-dv11A0A075B617 Echdc1-202ENSMUST00000160399 1845 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Trav16d-dv11A0A075B617 Gm45293-201ENSMUST00000209754 1812 ntBASIC10.77□□□□□ -0.69
Trav16d-dv11A0A075B617 Cndp2-202ENSMUST00000168419 2088 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Trav16d-dv11A0A075B617 Rnf10-203ENSMUST00000112097 3476 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.69
Trav16d-dv11A0A075B617 Tmem241-202ENSMUST00000055447 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Trav16d-dv11A0A075B617 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Trav16d-dv11A0A075B617 Nkd2-202ENSMUST00000118096 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Trav16d-dv11A0A075B617 Prx-203ENSMUST00000108355 5433 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Trav16d-dv11A0A075B617 Rgs12-202ENSMUST00000087684 4713 ntAPPRIS ALT2 TSL 5 BASIC10.76□□□□□ -0.69
Trav16d-dv11A0A075B617 Ndufv1-201ENSMUST00000042497 1661 ntAPPRIS P2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Trav16d-dv11A0A075B617 Pnrc2-201ENSMUST00000030436 1919 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Trav16d-dv11A0A075B617 Ankrd34b-203ENSMUST00000168871 3397 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Trav16d-dv11A0A075B617 Tubgcp4-215ENSMUST00000186659 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Trav16d-dv11A0A075B617 Cbl-206ENSMUST00000206147 3452 ntAPPRIS ALT2 TSL 5 BASIC10.76□□□□□ -0.69
Trav16d-dv11A0A075B617 Rhbdl3-201ENSMUST00000017836 3736 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Trav16d-dv11A0A075B617 Dnmt1-207ENSMUST00000216540 5543 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Trav16d-dv11A0A075B617 Camk4-201ENSMUST00000042868 12331 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Trav16d-dv11A0A075B617 Grk6-207ENSMUST00000225925 2769 ntBASIC10.76□□□□□ -0.69
Trav16d-dv11A0A075B617 Zfp868-202ENSMUST00000121886 2259 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Trav16d-dv11A0A075B617 Dab2ip-204ENSMUST00000112983 6051 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Trav16d-dv11A0A075B617 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Trav16d-dv11A0A075B617 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Trav16d-dv11A0A075B617 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Trav16d-dv11A0A075B617 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Trav16d-dv11A0A075B617 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Trav16d-dv11A0A075B617 Gm18959-201ENSMUST00000208954 655 ntBASIC10.76□□□□□ -0.69
Trav16d-dv11A0A075B617 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC10.76□□□□□ -0.69
Trav16d-dv11A0A075B617 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Trav16d-dv11A0A075B617 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC10.76□□□□□ -0.69
Trav16d-dv11A0A075B617 Kcnk13-204ENSMUST00000177549 3075 ntAPPRIS P1 TSL 5 BASIC10.76□□□□□ -0.69
Trav16d-dv11A0A075B617 Chrna4-202ENSMUST00000108851 2071 ntAPPRIS ALT2 TSL 5 BASIC10.76□□□□□ -0.69
Trav16d-dv11A0A075B617 Bptf-203ENSMUST00000106763 12036 ntAPPRIS ALT2 TSL 5 BASIC10.76□□□□□ -0.69
Trav16d-dv11A0A075B617 Enc1-201ENSMUST00000041623 4737 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Trav16d-dv11A0A075B617 N4bp3-201ENSMUST00000001080 2367 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Trav16d-dv11A0A075B617 Lrriq4-202ENSMUST00000108267 2387 ntAPPRIS P3 TSL 1 (best) BASIC10.76□□□□□ -0.69
Trav16d-dv11A0A075B617 Cad-206ENSMUST00000201838 3153 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Trav16d-dv11A0A075B617 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Trav16d-dv11A0A075B617 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Trav16d-dv11A0A075B617 Dysf-201ENSMUST00000081904 6660 ntAPPRIS P4 TSL 1 (best) BASIC10.76□□□□□ -0.69
Trav16d-dv11A0A075B617 Ank-201ENSMUST00000022875 3498 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Trav16d-dv11A0A075B617 Cdsn-201ENSMUST00000044804 2678 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Trav16d-dv11A0A075B617 Bid-201ENSMUST00000004560 2189 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Trav16d-dv11A0A075B617 Nfatc4-201ENSMUST00000024179 3267 ntAPPRIS P3 TSL 1 (best) BASIC10.76□□□□□ -0.69
Trav16d-dv11A0A075B617 Rasl12-202ENSMUST00000165682 1903 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Trav16d-dv11A0A075B617 Gbe1-207ENSMUST00000171132 3303 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Trav16d-dv11A0A075B617 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC10.76□□□□□ -0.69
Trav16d-dv11A0A075B617 Fgfr1-201ENSMUST00000084027 5025 ntAPPRIS P3 TSL 5 BASIC10.76□□□□□ -0.69
Trav16d-dv11A0A075B617 Ahcy-201ENSMUST00000054607 2543 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Trav16d-dv11A0A075B617 Sphk1-205ENSMUST00000106387 1957 ntAPPRIS ALT2 TSL 5 BASIC10.76□□□□□ -0.69
Trav16d-dv11A0A075B617 Gm29530-201ENSMUST00000187556 1956 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Trav16d-dv11A0A075B617 Rxrb-202ENSMUST00000116612 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Trav16d-dv11A0A075B617 C530008M17Rik-202ENSMUST00000120639 6826 ntAPPRIS P2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Trav16d-dv11A0A075B617 C530008M17Rik-211ENSMUST00000163347 6835 ntAPPRIS P2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Trav16d-dv11A0A075B617 Pja1-201ENSMUST00000036354 2563 ntAPPRIS P4 TSL 1 (best) BASIC10.75□□□□□ -0.69
Trav16d-dv11A0A075B617 Arnt-201ENSMUST00000015666 2603 ntTSL 5 BASIC10.75□□□□□ -0.69
Trav16d-dv11A0A075B617 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Trav16d-dv11A0A075B617 Npnt-204ENSMUST00000117164 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Trav16d-dv11A0A075B617 Etnk2-201ENSMUST00000129213 2074 ntAPPRIS ALT2 TSL 2 BASIC10.75□□□□□ -0.69
Trav16d-dv11A0A075B617 Zfp467-205ENSMUST00000114560 3266 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Trav16d-dv11A0A075B617 Gns-201ENSMUST00000040344 3855 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Trav16d-dv11A0A075B617 Phf21a-206ENSMUST00000111292 2461 ntAPPRIS P3 TSL 1 (best) BASIC10.75□□□□□ -0.69
Trav16d-dv11A0A075B617 Spg20-201ENSMUST00000044116 3770 ntAPPRIS P3 TSL 1 (best) BASIC10.75□□□□□ -0.69
Trav16d-dv11A0A075B617 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Trav16d-dv11A0A075B617 Akna-201ENSMUST00000035724 5387 ntAPPRIS P1 TSL 5 BASIC10.75□□□□□ -0.69
Trav16d-dv11A0A075B617 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC10.75□□□□□ -0.69
Trav16d-dv11A0A075B617 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Trav16d-dv11A0A075B617 Gm8344-201ENSMUST00000119813 856 ntBASIC10.75□□□□□ -0.69
Retrieved 100 of 76,532 protein–RNA pairs in 44.6 ms