Protein–RNA interactions for Protein: S4R1G7

H2afb3, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb3S4R1G7 Hlcs-202ENSMUST00000163193 5371 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
H2afb3S4R1G7 Tmem8b-202ENSMUST00000107865 4775 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
H2afb3S4R1G7 Kirrel-203ENSMUST00000159976 7236 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
H2afb3S4R1G7 Gpr157-201ENSMUST00000094451 4900 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
H2afb3S4R1G7 Papd5-203ENSMUST00000119033 4624 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
H2afb3S4R1G7 Zbtb33-201ENSMUST00000049740 5122 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
H2afb3S4R1G7 Pnn-201ENSMUST00000021381 3485 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
H2afb3S4R1G7 Lmx1b-201ENSMUST00000041730 4790 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
H2afb3S4R1G7 Mbp-203ENSMUST00000075372 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
H2afb3S4R1G7 Daxx-208ENSMUST00000174541 2325 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
H2afb3S4R1G7 Gm43509-201ENSMUST00000196551 2594 ntBASIC13.21□□□□□ -0.29
H2afb3S4R1G7 Tpt1-ps6-201ENSMUST00000121768 523 ntBASIC13.21□□□□□ -0.29
H2afb3S4R1G7 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC13.21□□□□□ -0.29
H2afb3S4R1G7 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
H2afb3S4R1G7 Dusp13-208ENSMUST00000183698 1019 ntTSL 5 BASIC13.21□□□□□ -0.29
H2afb3S4R1G7 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
H2afb3S4R1G7 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
H2afb3S4R1G7 Inhba-201ENSMUST00000042603 6390 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
H2afb3S4R1G7 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
H2afb3S4R1G7 3110082I17Rik-204ENSMUST00000198474 2030 ntTSL 2 BASIC13.21□□□□□ -0.29
H2afb3S4R1G7 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
H2afb3S4R1G7 Fgfr3-210ENSMUST00000169212 4245 ntAPPRIS P4 TSL 1 (best) BASIC13.21□□□□□ -0.29
H2afb3S4R1G7 Ptpn6-203ENSMUST00000171549 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
H2afb3S4R1G7 Mtfr2-201ENSMUST00000169712 1991 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
H2afb3S4R1G7 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.3
H2afb3S4R1G7 Mrps35-201ENSMUST00000036111 4162 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
H2afb3S4R1G7 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
H2afb3S4R1G7 Ppp2r5e-205ENSMUST00000220035 3135 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
H2afb3S4R1G7 Gigyf2-201ENSMUST00000027475 5724 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.3
H2afb3S4R1G7 Hif1a-201ENSMUST00000021530 4724 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.3
H2afb3S4R1G7 Dsp-202ENSMUST00000127906 7761 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.3
H2afb3S4R1G7 Srcin1-202ENSMUST00000107593 3733 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.3
H2afb3S4R1G7 Cers5-202ENSMUST00000109035 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
H2afb3S4R1G7 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
H2afb3S4R1G7 Zmym4-201ENSMUST00000106108 7102 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
H2afb3S4R1G7 Phtf2-201ENSMUST00000118174 4840 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
H2afb3S4R1G7 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
H2afb3S4R1G7 Atp2a3-202ENSMUST00000108484 4467 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
H2afb3S4R1G7 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
H2afb3S4R1G7 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
H2afb3S4R1G7 Ttc7-201ENSMUST00000041110 4614 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
H2afb3S4R1G7 Fam169b-202ENSMUST00000125685 2821 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
H2afb3S4R1G7 Fam169b-206ENSMUST00000210558 2815 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
H2afb3S4R1G7 Lypd1-202ENSMUST00000159417 6464 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
H2afb3S4R1G7 Pcdha11-201ENSMUST00000115658 5359 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
H2afb3S4R1G7 Mtif3-202ENSMUST00000066675 4927 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
H2afb3S4R1G7 Pear1-205ENSMUST00000172621 4490 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
H2afb3S4R1G7 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC13.2□□□□□ -0.3
H2afb3S4R1G7 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC13.2□□□□□ -0.3
H2afb3S4R1G7 Gm15406-202ENSMUST00000202229 767 ntTSL 2 BASIC13.2□□□□□ -0.3
H2afb3S4R1G7 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC13.2□□□□□ -0.3
H2afb3S4R1G7 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
H2afb3S4R1G7 Ccnj-201ENSMUST00000025983 3819 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
H2afb3S4R1G7 Ly6k-201ENSMUST00000060301 791 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
H2afb3S4R1G7 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
H2afb3S4R1G7 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
H2afb3S4R1G7 Krt14-201ENSMUST00000007272 1698 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
H2afb3S4R1G7 Smyd1-203ENSMUST00000114188 2064 ntTSL 5 BASIC13.2□□□□□ -0.3
H2afb3S4R1G7 Uhrf1bp1l-201ENSMUST00000020112 6448 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
H2afb3S4R1G7 Col18a1-201ENSMUST00000072755 5595 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
H2afb3S4R1G7 Cct4-204ENSMUST00000173867 2484 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
H2afb3S4R1G7 Cdc73-201ENSMUST00000018337 11586 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
H2afb3S4R1G7 Arhgef5-201ENSMUST00000031750 5469 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
H2afb3S4R1G7 1700012B07Rik-202ENSMUST00000106674 2035 ntAPPRIS P4 TSL 1 (best) BASIC13.2□□□□□ -0.3
H2afb3S4R1G7 Chfr-207ENSMUST00000198633 2623 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
H2afb3S4R1G7 Vldlr-207ENSMUST00000167487 7971 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
H2afb3S4R1G7 Gm20708-201ENSMUST00000132298 1780 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
H2afb3S4R1G7 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
H2afb3S4R1G7 Best4-ps-201ENSMUST00000129783 1380 ntBASIC13.2□□□□□ -0.3
H2afb3S4R1G7 Mroh1-202ENSMUST00000096385 5268 ntAPPRIS P4 TSL 1 (best) BASIC13.19□□□□□ -0.3
H2afb3S4R1G7 Larp4b-202ENSMUST00000188211 5610 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
H2afb3S4R1G7 Miat-205ENSMUST00000182953 9163 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
H2afb3S4R1G7 Carlr-201ENSMUST00000181515 2574 ntBASIC13.19□□□□□ -0.3
H2afb3S4R1G7 Neurod2-201ENSMUST00000041685 3142 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
H2afb3S4R1G7 Cadps2-213ENSMUST00000166458 4598 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
H2afb3S4R1G7 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
H2afb3S4R1G7 Gm7862-201ENSMUST00000121461 292 ntBASIC13.19□□□□□ -0.3
H2afb3S4R1G7 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
H2afb3S4R1G7 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
H2afb3S4R1G7 Fbxo17-205ENSMUST00000167118 861 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
H2afb3S4R1G7 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
H2afb3S4R1G7 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC13.19□□□□□ -0.3
H2afb3S4R1G7 Gm45167-201ENSMUST00000208007 322 ntBASIC13.19□□□□□ -0.3
H2afb3S4R1G7 Gm40513-201ENSMUST00000217258 411 ntTSL 3 BASIC13.19□□□□□ -0.3
H2afb3S4R1G7 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
H2afb3S4R1G7 AC164567.1-201ENSMUST00000219185 960 ntBASIC13.19□□□□□ -0.3
H2afb3S4R1G7 Treml1-204ENSMUST00000224001 1220 ntAPPRIS P2 BASIC13.19□□□□□ -0.3
H2afb3S4R1G7 Batf-201ENSMUST00000040536 955 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
H2afb3S4R1G7 Cchcr1-201ENSMUST00000045956 2748 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
H2afb3S4R1G7 Fbxl5-207ENSMUST00000124610 2306 ntTSL 5 BASIC13.19□□□□□ -0.3
H2afb3S4R1G7 Zfp318-204ENSMUST00000138127 3936 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
H2afb3S4R1G7 AI849053-201ENSMUST00000181021 2658 ntTSL 3 BASIC13.19□□□□□ -0.3
H2afb3S4R1G7 Ccdc158-203ENSMUST00000150359 3353 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
H2afb3S4R1G7 Chml-201ENSMUST00000104984 6905 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
H2afb3S4R1G7 Chml-202ENSMUST00000209720 6905 ntTSL 5 BASIC13.19□□□□□ -0.3
H2afb3S4R1G7 Midn-201ENSMUST00000042057 3727 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
H2afb3S4R1G7 Adal-201ENSMUST00000028702 2471 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
H2afb3S4R1G7 Lpcat2-201ENSMUST00000046290 2811 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
H2afb3S4R1G7 Mme-206ENSMUST00000194150 3345 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
H2afb3S4R1G7 Qsox1-207ENSMUST00000194632 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 30 ms