Protein–RNA interactions for Protein: Q9Z0Y9

Nr1h3, Oxysterols receptor LXR-alpha, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nr1h3Q9Z0Y9 Ino80e-214ENSMUST00000206349 883 ntTSL 2 BASIC15.94■□□□□ 0.14
Nr1h3Q9Z0Y9 AI463170-203ENSMUST00000219353 430 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Nr1h3Q9Z0Y9 Cartpt-201ENSMUST00000022150 827 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Nr1h3Q9Z0Y9 AC158529.1-201ENSMUST00000223618 239 ntBASIC15.94■□□□□ 0.14
Nr1h3Q9Z0Y9 Cartpt-202ENSMUST00000224142 1238 ntAPPRIS P1 BASIC15.94■□□□□ 0.14
Nr1h3Q9Z0Y9 Myl6b-201ENSMUST00000026428 1026 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Nr1h3Q9Z0Y9 Vkorc1-201ENSMUST00000033074 748 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Nr1h3Q9Z0Y9 Erp29-201ENSMUST00000052590 1123 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Nr1h3Q9Z0Y9 Selenov-201ENSMUST00000056589 1267 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Nr1h3Q9Z0Y9 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Nr1h3Q9Z0Y9 Cldn14-204ENSMUST00000169391 1456 ntAPPRIS P1 TSL 2 BASIC15.94■□□□□ 0.14
Nr1h3Q9Z0Y9 4930556H04Rik-201ENSMUST00000222451 1675 ntBASIC15.94■□□□□ 0.14
Nr1h3Q9Z0Y9 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Nr1h3Q9Z0Y9 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Nr1h3Q9Z0Y9 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Nr1h3Q9Z0Y9 Dlc1-203ENSMUST00000098826 6241 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
Nr1h3Q9Z0Y9 Ehd4-201ENSMUST00000028755 3730 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Nr1h3Q9Z0Y9 Arhgef1-201ENSMUST00000047873 3212 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
Nr1h3Q9Z0Y9 Gm10584-201ENSMUST00000207036 2628 ntBASIC15.94■□□□□ 0.14
Nr1h3Q9Z0Y9 Prelid1-201ENSMUST00000021942 2644 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Nr1h3Q9Z0Y9 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Nr1h3Q9Z0Y9 Ankrd27-202ENSMUST00000186245 1926 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Nr1h3Q9Z0Y9 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC15.94■□□□□ 0.14
Nr1h3Q9Z0Y9 Gm26681-201ENSMUST00000180851 1440 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Nr1h3Q9Z0Y9 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Nr1h3Q9Z0Y9 Paqr9-201ENSMUST00000079597 8367 ntAPPRIS P1 BASIC15.93■□□□□ 0.14
Nr1h3Q9Z0Y9 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
Nr1h3Q9Z0Y9 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Nr1h3Q9Z0Y9 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC15.93■□□□□ 0.14
Nr1h3Q9Z0Y9 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Nr1h3Q9Z0Y9 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
Nr1h3Q9Z0Y9 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Nr1h3Q9Z0Y9 Msmp-201ENSMUST00000107884 743 ntAPPRIS P1 TSL 3 BASIC15.93■□□□□ 0.14
Nr1h3Q9Z0Y9 Gm14767-201ENSMUST00000121559 586 ntBASIC15.93■□□□□ 0.14
Nr1h3Q9Z0Y9 Gm14206-201ENSMUST00000132973 747 ntTSL 3 BASIC15.93■□□□□ 0.14
Nr1h3Q9Z0Y9 Bcl2l14-206ENSMUST00000163589 2131 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
Nr1h3Q9Z0Y9 Gm7030-203ENSMUST00000173322 913 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Nr1h3Q9Z0Y9 Gm28630-201ENSMUST00000187806 498 ntBASIC15.93■□□□□ 0.14
Nr1h3Q9Z0Y9 Gm18766-201ENSMUST00000189811 808 ntBASIC15.93■□□□□ 0.14
Nr1h3Q9Z0Y9 Rbfox2-208ENSMUST00000227930 1218 ntBASIC15.93■□□□□ 0.14
Nr1h3Q9Z0Y9 Gm7030-201ENSMUST00000046131 913 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
Nr1h3Q9Z0Y9 Klk5-201ENSMUST00000048444 1239 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Nr1h3Q9Z0Y9 Hes5-201ENSMUST00000049621 1273 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Nr1h3Q9Z0Y9 Pou2f2-209ENSMUST00000175774 7047 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
Nr1h3Q9Z0Y9 Tex19.2-201ENSMUST00000039146 2046 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Nr1h3Q9Z0Y9 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
Nr1h3Q9Z0Y9 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC15.93■□□□□ 0.14
Nr1h3Q9Z0Y9 Fbxo30-202ENSMUST00000129456 5060 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Nr1h3Q9Z0Y9 Map4-201ENSMUST00000035055 6091 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
Nr1h3Q9Z0Y9 Farp2-202ENSMUST00000122402 2816 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Nr1h3Q9Z0Y9 Kif21a-201ENSMUST00000067205 6307 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
Nr1h3Q9Z0Y9 Osbpl10-201ENSMUST00000046627 1872 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Nr1h3Q9Z0Y9 Elovl1-207ENSMUST00000167636 1340 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Nr1h3Q9Z0Y9 Chchd5-201ENSMUST00000035481 1325 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Nr1h3Q9Z0Y9 Krt14-201ENSMUST00000007272 1698 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Nr1h3Q9Z0Y9 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Nr1h3Q9Z0Y9 Fam124a-201ENSMUST00000039064 3558 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
Nr1h3Q9Z0Y9 Sbno2-204ENSMUST00000217972 2462 ntTSL 2 BASIC15.92■□□□□ 0.14
Nr1h3Q9Z0Y9 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC15.92■□□□□ 0.14
Nr1h3Q9Z0Y9 Ano8-201ENSMUST00000093450 3653 ntAPPRIS P2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Nr1h3Q9Z0Y9 Celf4-206ENSMUST00000224553 1729 ntBASIC15.92■□□□□ 0.14
Nr1h3Q9Z0Y9 Usp30-201ENSMUST00000031588 4604 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Nr1h3Q9Z0Y9 Apip-201ENSMUST00000011055 919 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Nr1h3Q9Z0Y9 Hoxa7-202ENSMUST00000134367 807 ntTSL 5 BASIC15.92■□□□□ 0.14
Nr1h3Q9Z0Y9 Igfbp4-204ENSMUST00000140772 742 ntTSL 2 BASIC15.92■□□□□ 0.14
Nr1h3Q9Z0Y9 Pfdn5-205ENSMUST00000166658 1062 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Nr1h3Q9Z0Y9 Twf2-204ENSMUST00000188650 1508 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Nr1h3Q9Z0Y9 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Nr1h3Q9Z0Y9 Sgpl1-202ENSMUST00000122259 4102 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Nr1h3Q9Z0Y9 Med25-210ENSMUST00000208253 3693 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Nr1h3Q9Z0Y9 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Nr1h3Q9Z0Y9 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC15.92■□□□□ 0.14
Nr1h3Q9Z0Y9 Rps7-ps2-201ENSMUST00000219719 1347 ntBASIC15.92■□□□□ 0.14
Nr1h3Q9Z0Y9 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC15.91■□□□□ 0.14
Nr1h3Q9Z0Y9 E430024P14Rik-202ENSMUST00000160177 2050 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Nr1h3Q9Z0Y9 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC15.91■□□□□ 0.14
Nr1h3Q9Z0Y9 Ecel1-203ENSMUST00000160810 2898 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Nr1h3Q9Z0Y9 Aph1a-202ENSMUST00000056710 1601 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Nr1h3Q9Z0Y9 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Nr1h3Q9Z0Y9 Dip2b-202ENSMUST00000100203 8914 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Nr1h3Q9Z0Y9 Rufy3-205ENSMUST00000198965 3536 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Nr1h3Q9Z0Y9 Zfp36l2-201ENSMUST00000060366 3530 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Nr1h3Q9Z0Y9 Ppp1r8-201ENSMUST00000030702 2037 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
Nr1h3Q9Z0Y9 Gm45609-206ENSMUST00000210176 1023 ntTSL 5 BASIC15.91■□□□□ 0.14
Nr1h3Q9Z0Y9 Rhbdl2-201ENSMUST00000053202 1217 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
Nr1h3Q9Z0Y9 Guca1b-201ENSMUST00000024774 1668 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Nr1h3Q9Z0Y9 Ubn1-201ENSMUST00000052449 6455 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Nr1h3Q9Z0Y9 Srsf11-204ENSMUST00000121326 3106 ntAPPRIS P4 TSL 5 BASIC15.91■□□□□ 0.14
Nr1h3Q9Z0Y9 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Nr1h3Q9Z0Y9 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Nr1h3Q9Z0Y9 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
Nr1h3Q9Z0Y9 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Nr1h3Q9Z0Y9 Chtf8-202ENSMUST00000175940 2890 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Nr1h3Q9Z0Y9 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC15.9■□□□□ 0.14
Nr1h3Q9Z0Y9 Ctnna2-204ENSMUST00000160894 4162 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Nr1h3Q9Z0Y9 Erlec1-201ENSMUST00000073192 2532 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Nr1h3Q9Z0Y9 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC15.9■□□□□ 0.14
Nr1h3Q9Z0Y9 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Nr1h3Q9Z0Y9 Gm5745-201ENSMUST00000183748 313 ntBASIC15.9■□□□□ 0.14
Nr1h3Q9Z0Y9 Smim8-201ENSMUST00000029972 786 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Retrieved 100 of 76,532 protein–RNA pairs in 60.8 ms