Protein–RNA interactions for Protein: Q9WU84

Ccs, Copper chaperone for superoxide dismutase, mousemouse

Predictions only

Length 274 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CcsQ9WU84 Rnf123-214ENSMUST00000162355 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
CcsQ9WU84 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
CcsQ9WU84 R3hdm2-212ENSMUST00000166820 4281 ntAPPRIS P2 TSL 5 BASIC11.43□□□□□ -0.58
CcsQ9WU84 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
CcsQ9WU84 Gm38094-201ENSMUST00000195864 2978 ntBASIC11.43□□□□□ -0.58
CcsQ9WU84 Szrd1-203ENSMUST00000102487 3244 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
CcsQ9WU84 Cacna2d2-204ENSMUST00000166799 3474 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
CcsQ9WU84 Amhr2-201ENSMUST00000023809 1938 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
CcsQ9WU84 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
CcsQ9WU84 Sfta3-ps-205ENSMUST00000220379 2187 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
CcsQ9WU84 Islr2-210ENSMUST00000215950 4109 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
CcsQ9WU84 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC11.42□□□□□ -0.58
CcsQ9WU84 Glud1-201ENSMUST00000022322 3390 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
CcsQ9WU84 Morc4-202ENSMUST00000087401 3862 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
CcsQ9WU84 Spsb1-201ENSMUST00000038562 3092 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
CcsQ9WU84 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
CcsQ9WU84 Zyg11a-203ENSMUST00000223127 2283 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
CcsQ9WU84 Lap3-201ENSMUST00000046122 2267 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
CcsQ9WU84 Sim2-201ENSMUST00000072182 3670 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
CcsQ9WU84 Kirrel-203ENSMUST00000159976 7236 ntAPPRIS P2 TSL 1 (best) BASIC11.42□□□□□ -0.58
CcsQ9WU84 Col1a2-201ENSMUST00000031668 5348 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
CcsQ9WU84 Amz1-201ENSMUST00000060918 2683 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
CcsQ9WU84 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC11.42□□□□□ -0.58
CcsQ9WU84 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC11.42□□□□□ -0.58
CcsQ9WU84 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC11.42□□□□□ -0.58
CcsQ9WU84 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
CcsQ9WU84 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
CcsQ9WU84 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC11.42□□□□□ -0.58
CcsQ9WU84 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC11.42□□□□□ -0.58
CcsQ9WU84 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
CcsQ9WU84 Mob3c-201ENSMUST00000030477 2884 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
CcsQ9WU84 Cit-203ENSMUST00000112008 6087 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
CcsQ9WU84 1110008P14Rik-202ENSMUST00000146423 2618 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
CcsQ9WU84 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
CcsQ9WU84 Rasd2-202ENSMUST00000139848 2810 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
CcsQ9WU84 Pkdrej-201ENSMUST00000064370 7058 ntAPPRIS P1 BASIC11.42□□□□□ -0.58
CcsQ9WU84 Ncbp1-201ENSMUST00000030014 3010 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
CcsQ9WU84 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC11.42□□□□□ -0.58
CcsQ9WU84 Myh7-201ENSMUST00000102803 6135 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
CcsQ9WU84 Apbb1-213ENSMUST00000189265 1429 ntTSL 5 BASIC11.42□□□□□ -0.58
CcsQ9WU84 Pik3cd-204ENSMUST00000105690 4921 ntAPPRIS P4 TSL 1 (best) BASIC11.42□□□□□ -0.58
CcsQ9WU84 Olfr607-202ENSMUST00000214347 5706 ntAPPRIS P5 TSL 5 BASIC11.42□□□□□ -0.58
CcsQ9WU84 Hspa4-201ENSMUST00000020630 4618 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
CcsQ9WU84 Senp5-201ENSMUST00000023457 3498 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
CcsQ9WU84 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
CcsQ9WU84 Unc119b-201ENSMUST00000060798 3659 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
CcsQ9WU84 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
CcsQ9WU84 Hspa12b-201ENSMUST00000099349 3413 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
CcsQ9WU84 Gm14168-201ENSMUST00000144818 2197 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
CcsQ9WU84 Ttc7-201ENSMUST00000041110 4614 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
CcsQ9WU84 Dlst-201ENSMUST00000053811 2764 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
CcsQ9WU84 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
CcsQ9WU84 Hgs-202ENSMUST00000106203 2901 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
CcsQ9WU84 Hgs-201ENSMUST00000026900 2908 ntAPPRIS P2 TSL 1 (best) BASIC11.41□□□□□ -0.58
CcsQ9WU84 Frzb-201ENSMUST00000028389 3149 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
CcsQ9WU84 Pde4a-202ENSMUST00000039413 4653 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
CcsQ9WU84 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
CcsQ9WU84 Chrna4-202ENSMUST00000108851 2071 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
CcsQ9WU84 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
CcsQ9WU84 Gm996-204ENSMUST00000191602 4812 ntAPPRIS P1 TSL 2 BASIC11.41□□□□□ -0.58
CcsQ9WU84 Rnf34-201ENSMUST00000031434 4440 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
CcsQ9WU84 Tfpt-202ENSMUST00000108641 1166 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
CcsQ9WU84 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC11.41□□□□□ -0.58
CcsQ9WU84 Mras-203ENSMUST00000122384 1122 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
CcsQ9WU84 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC11.41□□□□□ -0.58
CcsQ9WU84 Tulp3-205ENSMUST00000157005 1053 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
CcsQ9WU84 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC11.41□□□□□ -0.58
CcsQ9WU84 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC11.41□□□□□ -0.58
CcsQ9WU84 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC11.41□□□□□ -0.58
CcsQ9WU84 Birc2-201ENSMUST00000054878 378 ntBASIC11.41□□□□□ -0.58
CcsQ9WU84 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
CcsQ9WU84 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
CcsQ9WU84 Rnpc3-202ENSMUST00000106535 2616 ntAPPRIS ALT1 TSL 1 (best) BASIC11.41□□□□□ -0.58
CcsQ9WU84 Cabp7-201ENSMUST00000009219 2628 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
CcsQ9WU84 Megf6-201ENSMUST00000030897 6851 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
CcsQ9WU84 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
CcsQ9WU84 Gm45740-201ENSMUST00000212103 2003 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
CcsQ9WU84 Tnip2-201ENSMUST00000030991 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
CcsQ9WU84 Mettl22-201ENSMUST00000046470 1825 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
CcsQ9WU84 Nup98-206ENSMUST00000211235 3748 ntTSL 5 BASIC11.41□□□□□ -0.58
CcsQ9WU84 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC11.41□□□□□ -0.58
CcsQ9WU84 Gm32996-201ENSMUST00000199828 1447 ntBASIC11.41□□□□□ -0.58
CcsQ9WU84 Cnih4-203ENSMUST00000111059 3127 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
CcsQ9WU84 Rxra-202ENSMUST00000100251 1952 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
CcsQ9WU84 Rxra-203ENSMUST00000113934 1989 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
CcsQ9WU84 Aqp3-201ENSMUST00000055327 1765 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
CcsQ9WU84 Rbbp8-201ENSMUST00000047322 3618 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
CcsQ9WU84 Kcna5-201ENSMUST00000060972 2862 ntAPPRIS P1 BASIC11.41□□□□□ -0.58
CcsQ9WU84 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
CcsQ9WU84 Olfm1-202ENSMUST00000100244 2686 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
CcsQ9WU84 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
CcsQ9WU84 Slc9a3-201ENSMUST00000036208 2490 ntAPPRIS P2 TSL 2 BASIC11.41□□□□□ -0.58
CcsQ9WU84 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC11.4□□□□□ -0.58
CcsQ9WU84 Adgrb2-202ENSMUST00000097868 4635 ntAPPRIS ALT2 TSL 5 BASIC11.4□□□□□ -0.58
CcsQ9WU84 Cfap69-201ENSMUST00000054865 4956 ntAPPRIS P2 TSL 1 (best) BASIC11.4□□□□□ -0.58
CcsQ9WU84 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
CcsQ9WU84 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.58
CcsQ9WU84 Slc39a3-201ENSMUST00000059551 3680 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
CcsQ9WU84 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
CcsQ9WU84 1700065D16Rik-205ENSMUST00000190890 2903 ntBASIC11.4□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 38.2 ms