Protein–RNA interactions for Protein: Q9WTU3

Scn8a, Sodium channel protein type 8 subunit alpha, mousemouse

Predictions only

Length 1,978 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn8aQ9WTU3 Pdk2-201ENSMUST00000038431 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Scn8aQ9WTU3 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Scn8aQ9WTU3 Pkig-209ENSMUST00000164399 983 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
Scn8aQ9WTU3 Mrps18c-201ENSMUST00000016977 638 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Scn8aQ9WTU3 Nradd-201ENSMUST00000035069 1223 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Scn8aQ9WTU3 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
Scn8aQ9WTU3 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC14.67□□□□□ -0.06
Scn8aQ9WTU3 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Scn8aQ9WTU3 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
Scn8aQ9WTU3 Tpm3-201ENSMUST00000029549 2230 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Scn8aQ9WTU3 Pdlim3-201ENSMUST00000034053 1604 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Scn8aQ9WTU3 Washc1-201ENSMUST00000072383 2904 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Scn8aQ9WTU3 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Scn8aQ9WTU3 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
Scn8aQ9WTU3 Acd-201ENSMUST00000042608 3154 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Scn8aQ9WTU3 Camk2b-208ENSMUST00000109812 1875 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Scn8aQ9WTU3 Rnf180-203ENSMUST00000224662 2734 ntAPPRIS ALT2 BASIC14.66□□□□□ -0.06
Scn8aQ9WTU3 Uqcrq-203ENSMUST00000109021 405 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Scn8aQ9WTU3 Ngb-202ENSMUST00000110176 908 ntTSL 3 BASIC14.66□□□□□ -0.06
Scn8aQ9WTU3 Mir1897-201ENSMUST00000122581 272 ntBASIC14.66□□□□□ -0.06
Scn8aQ9WTU3 Six3os1-205ENSMUST00000175913 791 ntTSL 3 BASIC14.66□□□□□ -0.06
Scn8aQ9WTU3 Ighv8-8-201ENSMUST00000192591 358 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
Scn8aQ9WTU3 Mpv17-203ENSMUST00000200833 1171 ntTSL 5 BASIC14.66□□□□□ -0.06
Scn8aQ9WTU3 Pdlim3-203ENSMUST00000210422 1479 ntAPPRIS ALT1 TSL 5 BASIC14.66□□□□□ -0.06
Scn8aQ9WTU3 Ccdc106-201ENSMUST00000045543 1534 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Scn8aQ9WTU3 Gm9856-201ENSMUST00000217077 2578 ntBASIC14.66□□□□□ -0.06
Scn8aQ9WTU3 Pam-210ENSMUST00000161567 3630 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
Scn8aQ9WTU3 9130024F11Rik-202ENSMUST00000185204 2628 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Scn8aQ9WTU3 Mmp11-202ENSMUST00000120281 1793 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Scn8aQ9WTU3 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Scn8aQ9WTU3 Cryzl1-201ENSMUST00000073466 1965 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Scn8aQ9WTU3 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Scn8aQ9WTU3 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
Scn8aQ9WTU3 Snx29-207ENSMUST00000180792 2667 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
Scn8aQ9WTU3 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC14.66□□□□□ -0.06
Scn8aQ9WTU3 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Scn8aQ9WTU3 Gm15487-201ENSMUST00000122373 465 ntBASIC14.65□□□□□ -0.06
Scn8aQ9WTU3 Ube2i-208ENSMUST00000173084 1286 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Scn8aQ9WTU3 Haus1-201ENSMUST00000048192 1004 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Scn8aQ9WTU3 Psmd8-202ENSMUST00000182328 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Scn8aQ9WTU3 Gm5320-201ENSMUST00000207163 1519 ntBASIC14.65□□□□□ -0.06
Scn8aQ9WTU3 Nfe2-205ENSMUST00000133600 1605 ntTSL 5 BASIC14.65□□□□□ -0.06
Scn8aQ9WTU3 Slc22a20-201ENSMUST00000041827 1897 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Scn8aQ9WTU3 Dnajc28-201ENSMUST00000049244 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Scn8aQ9WTU3 Zfp316-201ENSMUST00000051665 3054 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Scn8aQ9WTU3 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Scn8aQ9WTU3 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
Scn8aQ9WTU3 Nectin2-201ENSMUST00000075447 2735 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
Scn8aQ9WTU3 Ldha-202ENSMUST00000048209 1588 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Scn8aQ9WTU3 Ginm1-204ENSMUST00000124838 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Scn8aQ9WTU3 Cyp21a2-ps-201ENSMUST00000172970 1383 ntBASIC14.65□□□□□ -0.06
Scn8aQ9WTU3 D11Bhm181e-201ENSMUST00000122252 282 ntBASIC14.65□□□□□ -0.06
Scn8aQ9WTU3 2210408F21Rik-214ENSMUST00000155345 1022 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Scn8aQ9WTU3 Gm28942-201ENSMUST00000186334 365 ntTSL 3 BASIC14.65□□□□□ -0.06
Scn8aQ9WTU3 Selenow-201ENSMUST00000044355 736 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Scn8aQ9WTU3 Gm2423-201ENSMUST00000074863 733 ntBASIC14.65□□□□□ -0.06
Scn8aQ9WTU3 Mbtd1-202ENSMUST00000063718 3785 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Scn8aQ9WTU3 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Scn8aQ9WTU3 Prkcd-207ENSMUST00000112210 2777 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
Scn8aQ9WTU3 Neurod2-201ENSMUST00000041685 3142 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Scn8aQ9WTU3 P2rx3-202ENSMUST00000111613 1764 ntAPPRIS ALT1 TSL 5 BASIC14.64□□□□□ -0.07
Scn8aQ9WTU3 Gm44645-201ENSMUST00000205492 1653 ntBASIC14.64□□□□□ -0.07
Scn8aQ9WTU3 Nsmaf-201ENSMUST00000029910 3507 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Scn8aQ9WTU3 Rnf25-201ENSMUST00000027357 1479 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
Scn8aQ9WTU3 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Scn8aQ9WTU3 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Scn8aQ9WTU3 Xrcc2-204ENSMUST00000134972 464 ntTSL 3 BASIC14.64□□□□□ -0.07
Scn8aQ9WTU3 Gm12454-201ENSMUST00000139119 978 ntTSL 2 BASIC14.64□□□□□ -0.07
Scn8aQ9WTU3 2010015M23Rik-201ENSMUST00000181900 1199 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Scn8aQ9WTU3 Gm29585-201ENSMUST00000185270 514 ntTSL 5 BASIC14.64□□□□□ -0.07
Scn8aQ9WTU3 Gm33320-201ENSMUST00000192232 530 ntBASIC14.64□□□□□ -0.07
Scn8aQ9WTU3 Gm30934-201ENSMUST00000215803 815 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Scn8aQ9WTU3 Mfsd6l-201ENSMUST00000053211 2060 ntAPPRIS P1 BASIC14.64□□□□□ -0.07
Scn8aQ9WTU3 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Scn8aQ9WTU3 Hoxb8-201ENSMUST00000052650 2635 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Scn8aQ9WTU3 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
Scn8aQ9WTU3 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Scn8aQ9WTU3 Cldn14-201ENSMUST00000050962 1457 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Scn8aQ9WTU3 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC14.64□□□□□ -0.07
Scn8aQ9WTU3 Dsn1-202ENSMUST00000103130 2636 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Scn8aQ9WTU3 Zdhhc23-201ENSMUST00000036321 1380 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Scn8aQ9WTU3 Lcn5-202ENSMUST00000100312 660 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Scn8aQ9WTU3 Pla2g2e-202ENSMUST00000105803 381 ntTSL 5 BASIC14.64□□□□□ -0.07
Scn8aQ9WTU3 Gm28050-201ENSMUST00000124394 449 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Scn8aQ9WTU3 Gm11773-201ENSMUST00000138256 497 ntTSL 2 BASIC14.64□□□□□ -0.07
Scn8aQ9WTU3 Pax8-208ENSMUST00000153601 1226 ntTSL 5 BASIC14.64□□□□□ -0.07
Scn8aQ9WTU3 AC125206.2-201ENSMUST00000217454 574 ntBASIC14.64□□□□□ -0.07
Scn8aQ9WTU3 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
Scn8aQ9WTU3 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Scn8aQ9WTU3 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC14.63□□□□□ -0.07
Scn8aQ9WTU3 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Scn8aQ9WTU3 Pgap2-225ENSMUST00000156529 2034 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Scn8aQ9WTU3 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Scn8aQ9WTU3 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Scn8aQ9WTU3 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Scn8aQ9WTU3 Alox5-201ENSMUST00000026795 2821 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Scn8aQ9WTU3 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Scn8aQ9WTU3 Psrc1-202ENSMUST00000102629 1687 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Scn8aQ9WTU3 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Scn8aQ9WTU3 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC14.63□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 44.9 ms