Protein–RNA interactions for Protein: Q9R100

Cdh17, Cadherin-17, mousemouse

Predictions only

Length 827 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh17Q9R100 Gm15590-201ENSMUST00000078419 552 ntBASIC14.31□□□□□ -0.12
Cdh17Q9R100 Cdt1-201ENSMUST00000006760 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cdh17Q9R100 Cdk18-201ENSMUST00000027697 4355 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cdh17Q9R100 AC126250.1-201ENSMUST00000228343 1768 ntBASIC14.31□□□□□ -0.12
Cdh17Q9R100 Slc25a19-201ENSMUST00000021089 2307 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cdh17Q9R100 Hmga2-201ENSMUST00000072777 3710 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cdh17Q9R100 Ly6h-207ENSMUST00000163116 2801 ntAPPRIS ALT1 TSL 2 BASIC14.31□□□□□ -0.12
Cdh17Q9R100 Rasl12-202ENSMUST00000165682 1903 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Cdh17Q9R100 Fbln7-201ENSMUST00000028864 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cdh17Q9R100 Clstn1-202ENSMUST00000105691 4459 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cdh17Q9R100 Atl1-201ENSMUST00000021466 5150 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cdh17Q9R100 Pomgnt1-202ENSMUST00000106496 2613 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Cdh17Q9R100 Sirt4-202ENSMUST00000112067 1645 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cdh17Q9R100 Hnrnpa2b1-204ENSMUST00000203220 1638 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cdh17Q9R100 Serp1-201ENSMUST00000029385 4611 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cdh17Q9R100 Mef2d-204ENSMUST00000119251 3488 ntTSL 5 BASIC14.3□□□□□ -0.12
Cdh17Q9R100 Gbp5-201ENSMUST00000090127 3055 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cdh17Q9R100 Park7-204ENSMUST00000105675 882 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Cdh17Q9R100 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cdh17Q9R100 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cdh17Q9R100 Dusp3-205ENSMUST00000143177 391 ntTSL 3 BASIC14.3□□□□□ -0.12
Cdh17Q9R100 Egfl8-201ENSMUST00000015611 1150 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cdh17Q9R100 Olfr1344-201ENSMUST00000168341 1061 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
Cdh17Q9R100 Mir5126-201ENSMUST00000175513 77 ntBASIC14.3□□□□□ -0.12
Cdh17Q9R100 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Cdh17Q9R100 1110035H17Rik-202ENSMUST00000205672 1231 ntBASIC14.3□□□□□ -0.12
Cdh17Q9R100 AC130671.1-201ENSMUST00000227384 1237 ntBASIC14.3□□□□□ -0.12
Cdh17Q9R100 Bex3-201ENSMUST00000053540 930 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cdh17Q9R100 Egfl8-202ENSMUST00000097345 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cdh17Q9R100 Aptx-202ENSMUST00000068125 5383 ntAPPRIS P4 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cdh17Q9R100 Acadm-201ENSMUST00000072697 2047 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cdh17Q9R100 Gpx3-201ENSMUST00000082430 1594 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cdh17Q9R100 Leng9-201ENSMUST00000058358 2460 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
Cdh17Q9R100 Mael-202ENSMUST00000194057 1691 ntTSL 5 BASIC14.3□□□□□ -0.12
Cdh17Q9R100 Med15-201ENSMUST00000012259 3383 ntAPPRIS P4 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cdh17Q9R100 Las1l-202ENSMUST00000113864 2581 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Cdh17Q9R100 Asic3-201ENSMUST00000049346 1853 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Cdh17Q9R100 Pcdha1-201ENSMUST00000070797 5248 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cdh17Q9R100 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cdh17Q9R100 Usp51-201ENSMUST00000095755 2204 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cdh17Q9R100 Tbc1d30-201ENSMUST00000064107 5695 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cdh17Q9R100 Pelp1-201ENSMUST00000019065 3435 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cdh17Q9R100 Spg20-201ENSMUST00000044116 3770 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cdh17Q9R100 Fubp1-206ENSMUST00000196739 2526 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cdh17Q9R100 Znhit1-204ENSMUST00000111091 1070 ntTSL 5 BASIC14.29□□□□□ -0.12
Cdh17Q9R100 Saa1-201ENSMUST00000128088 609 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cdh17Q9R100 Mir5131-201ENSMUST00000175426 93 ntBASIC14.29□□□□□ -0.12
Cdh17Q9R100 Gm28659-201ENSMUST00000188013 759 ntBASIC14.29□□□□□ -0.12
Cdh17Q9R100 Tma7-203ENSMUST00000192801 386 ntTSL 3 BASIC14.29□□□□□ -0.12
Cdh17Q9R100 Gm2272-201ENSMUST00000194903 582 ntBASIC14.29□□□□□ -0.12
Cdh17Q9R100 9230114J08Rik-201ENSMUST00000200375 350 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Cdh17Q9R100 Olfr286-202ENSMUST00000205305 969 ntBASIC14.29□□□□□ -0.12
Cdh17Q9R100 AC155714.1-201ENSMUST00000214033 956 ntTSL 5 BASIC14.29□□□□□ -0.12
Cdh17Q9R100 Gins1-201ENSMUST00000028948 1087 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cdh17Q9R100 Fgfr1op2-201ENSMUST00000037836 687 ntTSL 3 BASIC14.29□□□□□ -0.12
Cdh17Q9R100 Ube2f-201ENSMUST00000059743 1154 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cdh17Q9R100 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC14.29□□□□□ -0.12
Cdh17Q9R100 P2rx3-203ENSMUST00000111616 1315 ntTSL 5 BASIC14.29□□□□□ -0.12
Cdh17Q9R100 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Cdh17Q9R100 Gm5069-201ENSMUST00000050581 1328 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Cdh17Q9R100 Pctp-201ENSMUST00000020864 2723 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cdh17Q9R100 Ralyl-206ENSMUST00000193117 2933 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
Cdh17Q9R100 Fam133b-201ENSMUST00000115527 1491 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cdh17Q9R100 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cdh17Q9R100 Dlk1-205ENSMUST00000109844 1703 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cdh17Q9R100 Zfp707-202ENSMUST00000109967 1703 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cdh17Q9R100 Sesn3-201ENSMUST00000034507 1827 ntTSL 5 BASIC14.29□□□□□ -0.12
Cdh17Q9R100 Ssbp2-201ENSMUST00000004094 3957 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cdh17Q9R100 Cox16-201ENSMUST00000002757 2007 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cdh17Q9R100 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Cdh17Q9R100 C230004F18Rik-203ENSMUST00000137153 2138 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Cdh17Q9R100 Gm11738-201ENSMUST00000134069 2158 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Cdh17Q9R100 Acbd5-215ENSMUST00000228050 4804 ntAPPRIS ALT2 BASIC14.29□□□□□ -0.12
Cdh17Q9R100 Fbxl4-201ENSMUST00000039234 2546 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cdh17Q9R100 Fh1-201ENSMUST00000027810 2636 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cdh17Q9R100 Mtif2-202ENSMUST00000093239 2741 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cdh17Q9R100 Pak1-205ENSMUST00000206984 2794 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Cdh17Q9R100 Dr1-201ENSMUST00000031190 3085 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cdh17Q9R100 Grm7-201ENSMUST00000071076 3127 ntAPPRIS ALT1 TSL 5 BASIC14.28□□□□□ -0.12
Cdh17Q9R100 Sacs-201ENSMUST00000089394 3345 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cdh17Q9R100 Midn-201ENSMUST00000042057 3727 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cdh17Q9R100 Tjp2-201ENSMUST00000099558 4591 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cdh17Q9R100 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC14.28□□□□□ -0.12
Cdh17Q9R100 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Cdh17Q9R100 Hdac10-202ENSMUST00000109347 1824 ntTSL 5 BASIC14.28□□□□□ -0.12
Cdh17Q9R100 Dnajc2-202ENSMUST00000115192 1132 ntTSL 2 BASIC14.28□□□□□ -0.12
Cdh17Q9R100 Krt42-201ENSMUST00000017270 1542 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cdh17Q9R100 Ush1c-207ENSMUST00000176371 1865 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Cdh17Q9R100 Mtcl1-211ENSMUST00000177034 5441 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Cdh17Q9R100 Olfr1411-202ENSMUST00000190844 1821 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Cdh17Q9R100 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cdh17Q9R100 Rtkn-202ENSMUST00000087938 3080 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cdh17Q9R100 Rogdi-202ENSMUST00000090453 652 ntTSL 5 BASIC14.28□□□□□ -0.12
Cdh17Q9R100 Cacng2-201ENSMUST00000019290 5510 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cdh17Q9R100 Bag6-201ENSMUST00000025250 3858 ntAPPRIS P3 TSL 5 BASIC14.28□□□□□ -0.12
Cdh17Q9R100 Tle1-204ENSMUST00000102848 3660 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Cdh17Q9R100 Plod2-203ENSMUST00000160359 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cdh17Q9R100 Moxd1-201ENSMUST00000095784 3090 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cdh17Q9R100 Krit1-211ENSMUST00000200386 2343 ntTSL 5 BASIC14.27□□□□□ -0.12
Cdh17Q9R100 Cfap99-201ENSMUST00000207754 2123 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 62.9 ms