Protein–RNA interactions for Protein: Q9QZM3

Clcf1, Cardiotrophin-like cytokine factor 1, mousemouse

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcf1Q9QZM3 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC13.32□□□□□ -0.28
Clcf1Q9QZM3 Ccny-201ENSMUST00000053917 4017 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Clcf1Q9QZM3 Dpm3-202ENSMUST00000107462 827 ntAPPRIS P1 TSL 3 BASIC13.32□□□□□ -0.28
Clcf1Q9QZM3 Bad-203ENSMUST00000113426 740 ntTSL 5 BASIC13.32□□□□□ -0.28
Clcf1Q9QZM3 Il15ra-206ENSMUST00000114834 784 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Clcf1Q9QZM3 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Clcf1Q9QZM3 Psmg3-202ENSMUST00000182602 733 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Clcf1Q9QZM3 3110079O15Rik-201ENSMUST00000027476 478 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Clcf1Q9QZM3 Gm8396-201ENSMUST00000057361 823 ntBASIC13.32□□□□□ -0.28
Clcf1Q9QZM3 Gm9898-201ENSMUST00000065469 1161 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Clcf1Q9QZM3 H2-K1-202ENSMUST00000087189 579 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Clcf1Q9QZM3 G0s2-201ENSMUST00000009777 871 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Clcf1Q9QZM3 Rbm26-201ENSMUST00000022715 3633 ntTSL 5 BASIC13.32□□□□□ -0.28
Clcf1Q9QZM3 Acss1-201ENSMUST00000028944 3618 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Clcf1Q9QZM3 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Clcf1Q9QZM3 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Clcf1Q9QZM3 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Clcf1Q9QZM3 Mcidas-201ENSMUST00000092089 2377 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Clcf1Q9QZM3 Elf4-202ENSMUST00000114958 6088 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Clcf1Q9QZM3 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Clcf1Q9QZM3 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Clcf1Q9QZM3 Tor1aip1-201ENSMUST00000027738 1952 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Clcf1Q9QZM3 Ylpm1-201ENSMUST00000021670 7003 ntAPPRIS P2 TSL 5 BASIC13.32□□□□□ -0.28
Clcf1Q9QZM3 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Clcf1Q9QZM3 Tmub1-201ENSMUST00000030799 1333 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Clcf1Q9QZM3 Foxs1-201ENSMUST00000099200 1311 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
Clcf1Q9QZM3 Ccdc157-202ENSMUST00000101626 5153 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Clcf1Q9QZM3 Iqck-202ENSMUST00000106547 2026 ntAPPRIS P2 TSL 5 BASIC13.32□□□□□ -0.28
Clcf1Q9QZM3 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Clcf1Q9QZM3 Kcnf1-201ENSMUST00000170580 4789 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
Clcf1Q9QZM3 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Clcf1Q9QZM3 Tsc22d1-202ENSMUST00000048371 4818 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Clcf1Q9QZM3 Zbtb20-202ENSMUST00000114690 2759 ntAPPRIS ALT1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Clcf1Q9QZM3 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Clcf1Q9QZM3 Ccdc85a-201ENSMUST00000042534 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Clcf1Q9QZM3 Mis12-201ENSMUST00000048807 3003 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Clcf1Q9QZM3 Fgfr2-207ENSMUST00000117872 4223 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Clcf1Q9QZM3 Nfya-206ENSMUST00000160319 1407 ntTSL 5 BASIC13.31□□□□□ -0.28
Clcf1Q9QZM3 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Clcf1Q9QZM3 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Clcf1Q9QZM3 Plod2-203ENSMUST00000160359 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Clcf1Q9QZM3 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Clcf1Q9QZM3 Zfp36-202ENSMUST00000209061 2465 ntAPPRIS ALT2 BASIC13.31□□□□□ -0.28
Clcf1Q9QZM3 Hlcs-205ENSMUST00000227141 4021 ntAPPRIS ALT2 BASIC13.31□□□□□ -0.28
Clcf1Q9QZM3 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Clcf1Q9QZM3 Cybrd1-201ENSMUST00000028403 5339 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Clcf1Q9QZM3 Igf2-203ENSMUST00000105935 650 ntAPPRIS P1 TSL 3 BASIC13.31□□□□□ -0.28
Clcf1Q9QZM3 Gm13365-201ENSMUST00000121188 973 ntBASIC13.31□□□□□ -0.28
Clcf1Q9QZM3 Gm14321-202ENSMUST00000139927 351 ntTSL 5 BASIC13.31□□□□□ -0.28
Clcf1Q9QZM3 Bcl2l2-204ENSMUST00000172844 498 ntTSL 5 BASIC13.31□□□□□ -0.28
Clcf1Q9QZM3 Gm44081-201ENSMUST00000204406 643 ntTSL 3 BASIC13.31□□□□□ -0.28
Clcf1Q9QZM3 Mlnr-ps-201ENSMUST00000208959 969 ntBASIC13.31□□□□□ -0.28
Clcf1Q9QZM3 Gm5628-201ENSMUST00000222318 1049 ntBASIC13.31□□□□□ -0.28
Clcf1Q9QZM3 CT010506.4-201ENSMUST00000225457 351 ntBASIC13.31□□□□□ -0.28
Clcf1Q9QZM3 CT025555.1-201ENSMUST00000225901 1217 ntBASIC13.31□□□□□ -0.28
Clcf1Q9QZM3 Gpr146-202ENSMUST00000053120 1040 ntBASIC13.31□□□□□ -0.28
Clcf1Q9QZM3 Gm9789-201ENSMUST00000062524 397 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
Clcf1Q9QZM3 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Clcf1Q9QZM3 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Clcf1Q9QZM3 Ube2l6-201ENSMUST00000102642 1560 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Clcf1Q9QZM3 Klhl33-204ENSMUST00000227271 5513 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
Clcf1Q9QZM3 Gjb6-201ENSMUST00000039380 2105 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Clcf1Q9QZM3 Sowaha-201ENSMUST00000104955 3702 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
Clcf1Q9QZM3 Bbx-204ENSMUST00000114477 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Clcf1Q9QZM3 Mtss1-201ENSMUST00000080371 4938 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Clcf1Q9QZM3 Fbxl8-201ENSMUST00000036221 1901 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Clcf1Q9QZM3 Sirpa-202ENSMUST00000099113 3342 ntTSL 3 BASIC13.31□□□□□ -0.28
Clcf1Q9QZM3 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Clcf1Q9QZM3 Vapb-201ENSMUST00000067530 7029 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Clcf1Q9QZM3 Scap-201ENSMUST00000098350 4227 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Clcf1Q9QZM3 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Clcf1Q9QZM3 Hsd17b7-202ENSMUST00000111353 1446 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Clcf1Q9QZM3 Zfp703-202ENSMUST00000154256 3152 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Clcf1Q9QZM3 Pygo2-201ENSMUST00000060061 3198 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Clcf1Q9QZM3 Cyp4f37-201ENSMUST00000077639 2642 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Clcf1Q9QZM3 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Clcf1Q9QZM3 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Clcf1Q9QZM3 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Clcf1Q9QZM3 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Clcf1Q9QZM3 Rnf11-201ENSMUST00000030284 4061 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Clcf1Q9QZM3 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Clcf1Q9QZM3 Cbx6-201ENSMUST00000109623 996 ntTSL 5 BASIC13.3□□□□□ -0.28
Clcf1Q9QZM3 Meig1-204ENSMUST00000115083 567 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
Clcf1Q9QZM3 Gm14701-201ENSMUST00000117156 348 ntBASIC13.3□□□□□ -0.28
Clcf1Q9QZM3 Rerg-203ENSMUST00000119610 890 ntTSL 3 BASIC13.3□□□□□ -0.28
Clcf1Q9QZM3 Rprl2-201ENSMUST00000157150 290 ntBASIC13.3□□□□□ -0.28
Clcf1Q9QZM3 Gm30684-201ENSMUST00000205632 600 ntTSL 3 BASIC13.3□□□□□ -0.28
Clcf1Q9QZM3 Elof1-203ENSMUST00000213233 810 ntAPPRIS P1 TSL 3 BASIC13.3□□□□□ -0.28
Clcf1Q9QZM3 AC159635.2-201ENSMUST00000223092 817 ntTSL 5 BASIC13.3□□□□□ -0.28
Clcf1Q9QZM3 Hnrnpa1l2-ps2-201ENSMUST00000022493 963 ntBASIC13.3□□□□□ -0.28
Clcf1Q9QZM3 Snrnp25-201ENSMUST00000039601 821 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Clcf1Q9QZM3 Gm10073-201ENSMUST00000073722 496 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
Clcf1Q9QZM3 Rplp1-201ENSMUST00000008036 499 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Clcf1Q9QZM3 Gm11946-201ENSMUST00000123459 3941 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Clcf1Q9QZM3 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Clcf1Q9QZM3 Slc38a1-201ENSMUST00000088452 7266 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Clcf1Q9QZM3 Gm26728-202ENSMUST00000203423 1333 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Clcf1Q9QZM3 9130017K11Rik-202ENSMUST00000135670 3338 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Clcf1Q9QZM3 Pcdha11-201ENSMUST00000115658 5359 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Clcf1Q9QZM3 Mospd2-201ENSMUST00000004715 2015 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 26.6 ms