Protein–RNA interactions for Protein: Q9JKS4

Ldb3, LIM domain-binding protein 3, mousemouse

Known RBP Predictions only

Length 723 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ldb3Q9JKS4 Cadm2-203ENSMUST00000120898 2768 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Ldb3Q9JKS4 Btaf1-201ENSMUST00000099494 7204 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ldb3Q9JKS4 Tgfbr2-202ENSMUST00000061101 8092 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Ldb3Q9JKS4 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ldb3Q9JKS4 Tmem253-201ENSMUST00000100638 1234 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ldb3Q9JKS4 Gm12017-201ENSMUST00000122453 1003 ntBASIC13.29□□□□□ -0.28
Ldb3Q9JKS4 Mir1895-201ENSMUST00000122615 79 ntBASIC13.29□□□□□ -0.28
Ldb3Q9JKS4 Prss45-202ENSMUST00000146794 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ldb3Q9JKS4 Rprl2-201ENSMUST00000157150 290 ntBASIC13.29□□□□□ -0.28
Ldb3Q9JKS4 Gm16163-201ENSMUST00000161868 1119 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Ldb3Q9JKS4 Snu13-203ENSMUST00000166578 1061 ntTSL 2 BASIC13.29□□□□□ -0.28
Ldb3Q9JKS4 Dpf3-205ENSMUST00000177801 1092 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Ldb3Q9JKS4 Gm2213-201ENSMUST00000197485 688 ntBASIC13.29□□□□□ -0.28
Ldb3Q9JKS4 Gm45098-201ENSMUST00000207179 657 ntBASIC13.29□□□□□ -0.28
Ldb3Q9JKS4 Gm45504-201ENSMUST00000211407 2107 ntBASIC13.29□□□□□ -0.28
Ldb3Q9JKS4 Ndufs6-203ENSMUST00000222930 512 ntTSL 3 BASIC13.29□□□□□ -0.28
Ldb3Q9JKS4 Emg1-201ENSMUST00000004379 1034 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ldb3Q9JKS4 Guca2b-201ENSMUST00000044426 605 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ldb3Q9JKS4 Poc1b-204ENSMUST00000159990 3449 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Ldb3Q9JKS4 Syvn1-203ENSMUST00000134667 3159 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ldb3Q9JKS4 Pltp-201ENSMUST00000059954 1809 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ldb3Q9JKS4 Vdac3-201ENSMUST00000009036 1354 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ldb3Q9JKS4 Uck2-202ENSMUST00000053686 4731 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ldb3Q9JKS4 Gm16845-201ENSMUST00000180419 1415 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Ldb3Q9JKS4 Dip2b-202ENSMUST00000100203 8914 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ldb3Q9JKS4 Capn12-201ENSMUST00000066880 3040 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Ldb3Q9JKS4 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ldb3Q9JKS4 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC13.29□□□□□ -0.28
Ldb3Q9JKS4 Zfand3-201ENSMUST00000057897 2617 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Ldb3Q9JKS4 Klhl26-202ENSMUST00000166976 2734 ntTSL 2 BASIC13.28□□□□□ -0.28
Ldb3Q9JKS4 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Ldb3Q9JKS4 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ldb3Q9JKS4 Acly-202ENSMUST00000107385 1741 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Ldb3Q9JKS4 Epha1-203ENSMUST00000204357 2948 ntTSL 5 BASIC13.28□□□□□ -0.28
Ldb3Q9JKS4 Med22-202ENSMUST00000102899 3506 ntAPPRIS ALT1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ldb3Q9JKS4 Ambra1-205ENSMUST00000111317 4929 ntTSL 5 BASIC13.28□□□□□ -0.28
Ldb3Q9JKS4 Edem3-204ENSMUST00000191070 3127 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Ldb3Q9JKS4 Bcs1l-201ENSMUST00000027358 1890 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ldb3Q9JKS4 Dnajc28-201ENSMUST00000049244 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ldb3Q9JKS4 Pcsk4-201ENSMUST00000020340 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ldb3Q9JKS4 Trav3-1-201ENSMUST00000103569 385 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
Ldb3Q9JKS4 Trav3-4-201ENSMUST00000103670 458 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
Ldb3Q9JKS4 Dnajc8-205ENSMUST00000105939 746 ntTSL 5 BASIC13.28□□□□□ -0.28
Ldb3Q9JKS4 Tmsb4x-202ENSMUST00000112175 864 ntTSL 2 BASIC13.28□□□□□ -0.28
Ldb3Q9JKS4 Gm11543-201ENSMUST00000120758 370 ntBASIC13.28□□□□□ -0.28
Ldb3Q9JKS4 Dph3-205ENSMUST00000124303 809 ntTSL 2 BASIC13.28□□□□□ -0.28
Ldb3Q9JKS4 Rps10-ps2-201ENSMUST00000127484 496 ntBASIC13.28□□□□□ -0.28
Ldb3Q9JKS4 Nfya-203ENSMUST00000159063 1255 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Ldb3Q9JKS4 Arfgap1-213ENSMUST00000184394 1209 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Ldb3Q9JKS4 9230114J08Rik-201ENSMUST00000200375 350 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Ldb3Q9JKS4 Hapln3-202ENSMUST00000205782 930 ntTSL 5 BASIC13.28□□□□□ -0.28
Ldb3Q9JKS4 Gm29683-202ENSMUST00000208511 720 ntTSL 3 BASIC13.28□□□□□ -0.28
Ldb3Q9JKS4 March3-201ENSMUST00000035278 860 ntAPPRIS P1 TSL 3 BASIC13.28□□□□□ -0.28
Ldb3Q9JKS4 Olfr324-201ENSMUST00000054683 1122 ntAPPRIS P2 BASIC13.28□□□□□ -0.28
Ldb3Q9JKS4 Gm9789-201ENSMUST00000062524 397 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
Ldb3Q9JKS4 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Ldb3Q9JKS4 1700086L19Rik-201ENSMUST00000095617 706 ntBASIC13.28□□□□□ -0.28
Ldb3Q9JKS4 Micall2-201ENSMUST00000044642 3346 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ldb3Q9JKS4 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ldb3Q9JKS4 Chuk-201ENSMUST00000026217 3502 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ldb3Q9JKS4 Eif4a3-201ENSMUST00000026667 1509 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ldb3Q9JKS4 Nudt18-203ENSMUST00000228768 1578 ntBASIC13.28□□□□□ -0.28
Ldb3Q9JKS4 Kitl-202ENSMUST00000105283 5648 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ldb3Q9JKS4 Rsbn1-202ENSMUST00000068879 6712 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ldb3Q9JKS4 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Ldb3Q9JKS4 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Ldb3Q9JKS4 Echdc1-202ENSMUST00000160399 1845 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Ldb3Q9JKS4 Senp6-202ENSMUST00000164859 3853 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Ldb3Q9JKS4 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.28
Ldb3Q9JKS4 Unc93b1-204ENSMUST00000165711 1991 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.28
Ldb3Q9JKS4 1700012B07Rik-202ENSMUST00000106674 2035 ntAPPRIS P4 TSL 1 (best) BASIC13.27□□□□□ -0.28
Ldb3Q9JKS4 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Ldb3Q9JKS4 Cacna1g-201ENSMUST00000021234 8139 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.28
Ldb3Q9JKS4 Sec61a2-209ENSMUST00000193792 2110 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Ldb3Q9JKS4 Dmtn-201ENSMUST00000022694 5418 ntAPPRIS ALT1 TSL 5 BASIC13.27□□□□□ -0.28
Ldb3Q9JKS4 Psmd5-201ENSMUST00000028225 4397 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Ldb3Q9JKS4 Usp51-201ENSMUST00000095755 2204 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Ldb3Q9JKS4 Mbtps2-201ENSMUST00000058098 4797 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Ldb3Q9JKS4 Tle1-202ENSMUST00000072695 3644 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Ldb3Q9JKS4 Tmbim6-201ENSMUST00000023749 2452 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Ldb3Q9JKS4 Hnrnpul1-205ENSMUST00000206832 3784 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Ldb3Q9JKS4 Nme1-202ENSMUST00000107844 452 ntTSL 3 BASIC13.27□□□□□ -0.29
Ldb3Q9JKS4 Crybb3-202ENSMUST00000117143 749 ntAPPRIS P1 TSL 3 BASIC13.27□□□□□ -0.29
Ldb3Q9JKS4 Gm13365-201ENSMUST00000121188 973 ntBASIC13.27□□□□□ -0.29
Ldb3Q9JKS4 Mmab-203ENSMUST00000123256 1277 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Ldb3Q9JKS4 Gm13496-201ENSMUST00000141133 1165 ntTSL 2 BASIC13.27□□□□□ -0.29
Ldb3Q9JKS4 Gm23547-201ENSMUST00000158210 271 ntBASIC13.27□□□□□ -0.29
Ldb3Q9JKS4 Ccnh-202ENSMUST00000163600 1055 ntTSL 5 BASIC13.27□□□□□ -0.29
Ldb3Q9JKS4 Gm20481-201ENSMUST00000173680 564 ntAPPRIS P1 TSL 3 BASIC13.27□□□□□ -0.29
Ldb3Q9JKS4 1190007I07Rik-202ENSMUST00000176200 586 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.29
Ldb3Q9JKS4 1190007I07Rik-203ENSMUST00000183363 406 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Ldb3Q9JKS4 Gm37230-201ENSMUST00000194491 818 ntBASIC13.27□□□□□ -0.29
Ldb3Q9JKS4 Gm43073-201ENSMUST00000198200 1189 ntBASIC13.27□□□□□ -0.29
Ldb3Q9JKS4 Ftl1-ps1-202ENSMUST00000222435 938 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
Ldb3Q9JKS4 Lce1b-201ENSMUST00000029531 647 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Ldb3Q9JKS4 Lce3b-201ENSMUST00000046234 562 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Ldb3Q9JKS4 1190007I07Rik-201ENSMUST00000079648 716 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Ldb3Q9JKS4 AI849053-201ENSMUST00000181021 2658 ntTSL 3 BASIC13.27□□□□□ -0.29
Ldb3Q9JKS4 Coq6-203ENSMUST00000110278 1354 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
Ldb3Q9JKS4 Atp4b-201ENSMUST00000033826 1378 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 36.5 ms