Protein–RNA interactions for Protein: Q9ES64

Ush1c, Harmonin, mousemouse

Predictions only

Length 910 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ush1cQ9ES64 Cpne6-202ENSMUST00000163767 2004 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ush1cQ9ES64 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC16.84■□□□□ 0.29
Ush1cQ9ES64 Tjap1-211ENSMUST00000225080 2412 ntAPPRIS P2 BASIC16.84■□□□□ 0.29
Ush1cQ9ES64 Tfe3-211ENSMUST00000137467 3390 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
Ush1cQ9ES64 Abr-205ENSMUST00000108408 3534 ntTSL 5 BASIC16.83■□□□□ 0.29
Ush1cQ9ES64 Sphk1-205ENSMUST00000106387 1957 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
Ush1cQ9ES64 Txlng-203ENSMUST00000112315 2525 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Ush1cQ9ES64 Sgms1-212ENSMUST00000151289 2488 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Ush1cQ9ES64 Nxpe5-202ENSMUST00000159798 2568 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Ush1cQ9ES64 Diaph2-207ENSMUST00000167619 8439 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
Ush1cQ9ES64 Gemin5-205ENSMUST00000172035 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Ush1cQ9ES64 Syngap1-202ENSMUST00000177932 3927 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
Ush1cQ9ES64 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Ush1cQ9ES64 Gm17807-201ENSMUST00000186869 298 ntBASIC16.83■□□□□ 0.28
Ush1cQ9ES64 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Ush1cQ9ES64 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Ush1cQ9ES64 Fgfr1op2-201ENSMUST00000037836 687 ntTSL 3 BASIC16.83■□□□□ 0.28
Ush1cQ9ES64 Tbrg4-201ENSMUST00000000394 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Ush1cQ9ES64 Fam19a4-201ENSMUST00000089295 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Ush1cQ9ES64 Dlgap1-202ENSMUST00000097288 2626 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Ush1cQ9ES64 Mroh1-202ENSMUST00000096385 5268 ntAPPRIS P4 TSL 1 (best) BASIC16.83■□□□□ 0.28
Ush1cQ9ES64 Amotl2-201ENSMUST00000035121 4328 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Ush1cQ9ES64 Gm37844-201ENSMUST00000192473 4097 ntBASIC16.83■□□□□ 0.28
Ush1cQ9ES64 Slc39a3-201ENSMUST00000059551 3680 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Ush1cQ9ES64 Dnm1-201ENSMUST00000078352 3246 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Ush1cQ9ES64 Lgi3-201ENSMUST00000047331 3174 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Ush1cQ9ES64 Tbc1d16-203ENSMUST00000207655 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Ush1cQ9ES64 Prkcd-207ENSMUST00000112210 2777 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
Ush1cQ9ES64 Gpc2-201ENSMUST00000014089 2514 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
Ush1cQ9ES64 Miat-205ENSMUST00000182953 9163 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Ush1cQ9ES64 Klhl18-203ENSMUST00000198164 4538 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Ush1cQ9ES64 Irf7-203ENSMUST00000106023 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ush1cQ9ES64 Hipk3-202ENSMUST00000111124 4125 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
Ush1cQ9ES64 4930402H24Rik-202ENSMUST00000110243 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ush1cQ9ES64 Acot6-202ENSMUST00000222921 3622 ntBASIC16.82■□□□□ 0.28
Ush1cQ9ES64 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ush1cQ9ES64 Kank2-201ENSMUST00000034717 5040 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ush1cQ9ES64 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ush1cQ9ES64 Sirt5-203ENSMUST00000220576 1579 ntTSL 5 BASIC16.82■□□□□ 0.28
Ush1cQ9ES64 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC16.82■□□□□ 0.28
Ush1cQ9ES64 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Ush1cQ9ES64 Cnot7-201ENSMUST00000034012 2615 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ush1cQ9ES64 Grid2ip-202ENSMUST00000110733 3825 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ush1cQ9ES64 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Ush1cQ9ES64 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC16.82■□□□□ 0.28
Ush1cQ9ES64 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Ush1cQ9ES64 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC16.82■□□□□ 0.28
Ush1cQ9ES64 Gm27742-201ENSMUST00000184667 60 ntBASIC16.82■□□□□ 0.28
Ush1cQ9ES64 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC16.82■□□□□ 0.28
Ush1cQ9ES64 Armcx6-202ENSMUST00000113194 2120 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
Ush1cQ9ES64 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC16.82■□□□□ 0.28
Ush1cQ9ES64 D230025D16Rik-201ENSMUST00000034361 2916 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ush1cQ9ES64 Hist1h1e-201ENSMUST00000062045 1930 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
Ush1cQ9ES64 Iffo1-201ENSMUST00000117675 2833 ntAPPRIS P4 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ush1cQ9ES64 Bhlhb9-204ENSMUST00000180025 2812 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
Ush1cQ9ES64 Car10-203ENSMUST00000107858 2742 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Ush1cQ9ES64 Ggn-202ENSMUST00000098609 2653 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ush1cQ9ES64 Wsb1-201ENSMUST00000017821 2476 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ush1cQ9ES64 Hdac5-203ENSMUST00000107151 4852 ntTSL 5 BASIC16.81■□□□□ 0.28
Ush1cQ9ES64 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ush1cQ9ES64 Kcnq2-202ENSMUST00000049792 2920 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Ush1cQ9ES64 Dnaaf1-201ENSMUST00000093100 2821 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ush1cQ9ES64 Gm996-204ENSMUST00000191602 4812 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
Ush1cQ9ES64 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Ush1cQ9ES64 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Ush1cQ9ES64 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ush1cQ9ES64 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ush1cQ9ES64 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Ush1cQ9ES64 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ush1cQ9ES64 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
Ush1cQ9ES64 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ush1cQ9ES64 Eif4e3-201ENSMUST00000032151 2515 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ush1cQ9ES64 Ptpn11-202ENSMUST00000100770 5599 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ush1cQ9ES64 Mindy3-201ENSMUST00000028105 2344 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ush1cQ9ES64 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC16.81■□□□□ 0.28
Ush1cQ9ES64 Pear1-205ENSMUST00000172621 4490 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ush1cQ9ES64 Zfp747-201ENSMUST00000067425 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ush1cQ9ES64 Adad1-203ENSMUST00000144629 3101 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ush1cQ9ES64 Alx1-205ENSMUST00000218282 2012 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
Ush1cQ9ES64 Ermard-203ENSMUST00000097393 2535 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ush1cQ9ES64 Wdr36-202ENSMUST00000166214 2942 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ush1cQ9ES64 1810008I18Rik-201ENSMUST00000185464 2419 ntBASIC16.8■□□□□ 0.28
Ush1cQ9ES64 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ush1cQ9ES64 Spg20-201ENSMUST00000044116 3770 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ush1cQ9ES64 Ssh1-204ENSMUST00000159592 8436 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ush1cQ9ES64 Dis3l-203ENSMUST00000120760 3661 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Ush1cQ9ES64 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ush1cQ9ES64 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ush1cQ9ES64 Gm12503-201ENSMUST00000146576 3127 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Ush1cQ9ES64 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC16.8■□□□□ 0.28
Ush1cQ9ES64 Hnrnpm-202ENSMUST00000114385 2550 ntTSL 2 BASIC16.8■□□□□ 0.28
Ush1cQ9ES64 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Ush1cQ9ES64 Gm25406-201ENSMUST00000157599 105 ntBASIC16.8■□□□□ 0.28
Ush1cQ9ES64 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC16.8■□□□□ 0.28
Ush1cQ9ES64 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ush1cQ9ES64 Usp20-202ENSMUST00000102849 5088 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ush1cQ9ES64 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ush1cQ9ES64 Ccdc92b-201ENSMUST00000100866 4002 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ush1cQ9ES64 Ccser2-202ENSMUST00000090024 7509 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ush1cQ9ES64 Vta1-205ENSMUST00000154132 1974 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 23.4 ms