Protein–RNA interactions for Protein: Q9ERD7

Tubb3, Tubulin beta-3 chain, mousemouse

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tubb3Q9ERD7 Aimp2-202ENSMUST00000100483 1073 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Tubb3Q9ERD7 Gm23935-201ENSMUST00000102303 57 ntBASIC14.59□□□□□ -0.07
Tubb3Q9ERD7 Gm24270-201ENSMUST00000102326 57 ntBASIC14.59□□□□□ -0.07
Tubb3Q9ERD7 Dhdds-203ENSMUST00000105886 1015 ntTSL 5 BASIC14.59□□□□□ -0.07
Tubb3Q9ERD7 Tmsb4x-202ENSMUST00000112175 864 ntTSL 2 BASIC14.59□□□□□ -0.07
Tubb3Q9ERD7 Rabepk-202ENSMUST00000113086 1106 ntTSL 5 BASIC14.59□□□□□ -0.07
Tubb3Q9ERD7 Sfxn5-203ENSMUST00000113787 638 ntTSL 2 BASIC14.59□□□□□ -0.07
Tubb3Q9ERD7 Zglp1-201ENSMUST00000115494 1010 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Tubb3Q9ERD7 Gm24245-201ENSMUST00000157318 57 ntBASIC14.59□□□□□ -0.07
Tubb3Q9ERD7 Aimp2-201ENSMUST00000031613 1185 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Tubb3Q9ERD7 Spr-201ENSMUST00000045986 1230 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Tubb3Q9ERD7 Crxos-201ENSMUST00000098801 934 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Tubb3Q9ERD7 Eif5-201ENSMUST00000050993 1969 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Tubb3Q9ERD7 Prickle1-201ENSMUST00000048982 4085 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Tubb3Q9ERD7 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Tubb3Q9ERD7 Khdrbs1-201ENSMUST00000066257 3738 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Tubb3Q9ERD7 Ahcy-201ENSMUST00000054607 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Tubb3Q9ERD7 Gm5366-201ENSMUST00000215494 1338 ntBASIC14.59□□□□□ -0.07
Tubb3Q9ERD7 Pak1-205ENSMUST00000206984 2794 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
Tubb3Q9ERD7 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Tubb3Q9ERD7 Wbp2-201ENSMUST00000074628 1826 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Tubb3Q9ERD7 Slc25a19-201ENSMUST00000021089 2307 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Tubb3Q9ERD7 Tmtc2-201ENSMUST00000061506 5629 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Tubb3Q9ERD7 Catip-201ENSMUST00000097697 2101 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Tubb3Q9ERD7 Cdon-202ENSMUST00000119129 7503 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
Tubb3Q9ERD7 Sidt2-201ENSMUST00000038488 4248 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Tubb3Q9ERD7 Map4k5-202ENSMUST00000110567 4250 ntTSL 5 BASIC14.58□□□□□ -0.07
Tubb3Q9ERD7 Kif21a-203ENSMUST00000100304 6439 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.07
Tubb3Q9ERD7 Kif21a-202ENSMUST00000088614 6439 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.07
Tubb3Q9ERD7 Hnrnpa3-202ENSMUST00000111961 1734 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.07
Tubb3Q9ERD7 Itfg1-201ENSMUST00000034140 3306 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Tubb3Q9ERD7 Gm3739-201ENSMUST00000165744 2011 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
Tubb3Q9ERD7 Spon2-201ENSMUST00000046186 2045 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Tubb3Q9ERD7 Arl11-202ENSMUST00000224727 2095 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
Tubb3Q9ERD7 Ubtf-209ENSMUST00000173870 2936 ntAPPRIS P3 TSL 5 BASIC14.58□□□□□ -0.08
Tubb3Q9ERD7 Cbln4-201ENSMUST00000087950 2902 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Tubb3Q9ERD7 Dennd1a-201ENSMUST00000102787 4342 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Tubb3Q9ERD7 Echdc1-202ENSMUST00000160399 1845 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Tubb3Q9ERD7 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Tubb3Q9ERD7 Cchcr1-202ENSMUST00000164242 2656 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Tubb3Q9ERD7 Tacc3-201ENSMUST00000074849 2669 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Tubb3Q9ERD7 Dlk1-203ENSMUST00000109842 1129 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Tubb3Q9ERD7 Gm13375-201ENSMUST00000126967 854 ntTSL 2 BASIC14.58□□□□□ -0.08
Tubb3Q9ERD7 Pcp2-204ENSMUST00000136105 504 ntAPPRIS P4 TSL 1 (best) BASIC14.58□□□□□ -0.08
Tubb3Q9ERD7 Rps2-ps5-201ENSMUST00000184266 849 ntBASIC14.58□□□□□ -0.08
Tubb3Q9ERD7 Mir7036b-201ENSMUST00000184791 63 ntBASIC14.58□□□□□ -0.08
Tubb3Q9ERD7 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Tubb3Q9ERD7 Olfr541-201ENSMUST00000080681 1103 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
Tubb3Q9ERD7 Mxra8os-201ENSMUST00000097740 687 ntBASIC14.58□□□□□ -0.08
Tubb3Q9ERD7 Gm7901-201ENSMUST00000120430 1597 ntBASIC14.58□□□□□ -0.08
Tubb3Q9ERD7 Gm5648-201ENSMUST00000122244 1587 ntBASIC14.58□□□□□ -0.08
Tubb3Q9ERD7 Ccnf-201ENSMUST00000115390 3099 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Tubb3Q9ERD7 Ss18-201ENSMUST00000040924 3090 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
Tubb3Q9ERD7 Atp6v0d1-201ENSMUST00000013304 1629 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Tubb3Q9ERD7 Necap2-201ENSMUST00000030760 1906 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Tubb3Q9ERD7 Aim2-202ENSMUST00000147604 2839 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
Tubb3Q9ERD7 Ptprn2-201ENSMUST00000070733 3201 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Tubb3Q9ERD7 Itpk1-201ENSMUST00000046518 2918 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Tubb3Q9ERD7 Hoxb8-201ENSMUST00000052650 2635 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Tubb3Q9ERD7 Pdia2-201ENSMUST00000039113 1721 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Tubb3Q9ERD7 Plod2-203ENSMUST00000160359 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Tubb3Q9ERD7 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Tubb3Q9ERD7 Gtf2b-201ENSMUST00000029938 1455 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Tubb3Q9ERD7 AC166574.6-201ENSMUST00000227889 1806 ntBASIC14.57□□□□□ -0.08
Tubb3Q9ERD7 Zfp395-201ENSMUST00000066994 4229 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Tubb3Q9ERD7 Tgif2-202ENSMUST00000081335 2900 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Tubb3Q9ERD7 Dmtn-202ENSMUST00000022695 4080 ntTSL 5 BASIC14.57□□□□□ -0.08
Tubb3Q9ERD7 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Tubb3Q9ERD7 Mtif2-202ENSMUST00000093239 2741 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Tubb3Q9ERD7 Gm11453-201ENSMUST00000117318 1007 ntBASIC14.57□□□□□ -0.08
Tubb3Q9ERD7 H2af-ps-201ENSMUST00000119066 295 ntBASIC14.57□□□□□ -0.08
Tubb3Q9ERD7 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC14.57□□□□□ -0.08
Tubb3Q9ERD7 Btf3-204ENSMUST00000134542 780 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
Tubb3Q9ERD7 Gm27244-201ENSMUST00000184260 380 ntTSL 5 BASIC14.57□□□□□ -0.08
Tubb3Q9ERD7 Gpr160-207ENSMUST00000166278 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Tubb3Q9ERD7 Mef2b-203ENSMUST00000110143 1312 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Tubb3Q9ERD7 Arhgap44-203ENSMUST00000093002 3982 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
Tubb3Q9ERD7 Gm28182-201ENSMUST00000188354 2477 ntBASIC14.57□□□□□ -0.08
Tubb3Q9ERD7 H13-202ENSMUST00000089059 1743 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Tubb3Q9ERD7 Klc2-201ENSMUST00000025798 2940 ntTSL 5 BASIC14.57□□□□□ -0.08
Tubb3Q9ERD7 Prkcb-202ENSMUST00000064989 2911 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
Tubb3Q9ERD7 Gm9918-201ENSMUST00000181801 2192 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Tubb3Q9ERD7 Kpna6-201ENSMUST00000003828 2195 ntAPPRIS ALT1 TSL 5 BASIC14.57□□□□□ -0.08
Tubb3Q9ERD7 Tmem241-202ENSMUST00000055447 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Tubb3Q9ERD7 Gpd2-202ENSMUST00000112618 5759 ntTSL 5 BASIC14.57□□□□□ -0.08
Tubb3Q9ERD7 Sema6b-202ENSMUST00000167545 3847 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Tubb3Q9ERD7 Vamp2-201ENSMUST00000021273 2205 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Tubb3Q9ERD7 Opn5-201ENSMUST00000068355 1824 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Tubb3Q9ERD7 Col16a1-201ENSMUST00000044565 5206 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Tubb3Q9ERD7 Fuz-213ENSMUST00000209039 1453 ntTSL 5 BASIC14.57□□□□□ -0.08
Tubb3Q9ERD7 Lipo3-201ENSMUST00000025694 2768 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Tubb3Q9ERD7 Sept8-202ENSMUST00000117061 4563 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
Tubb3Q9ERD7 Lmna-202ENSMUST00000036252 1536 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Tubb3Q9ERD7 Zfp334-201ENSMUST00000103084 8205 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Tubb3Q9ERD7 Adck5-214ENSMUST00000162503 2040 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
Tubb3Q9ERD7 Rrnad1-206ENSMUST00000160074 1620 ntTSL 5 BASIC14.56□□□□□ -0.08
Tubb3Q9ERD7 Gm13425-201ENSMUST00000145389 5391 ntTSL 3 BASIC14.56□□□□□ -0.08
Tubb3Q9ERD7 Irs2-201ENSMUST00000040514 6323 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Tubb3Q9ERD7 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC14.56□□□□□ -0.08
Tubb3Q9ERD7 Repin1-201ENSMUST00000009420 3145 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 37.7 ms