Protein–RNA interactions for Protein: Q9EQH3

Vps35, Vacuolar protein sorting-associated protein 35, mousemouse

Known RBP Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps35Q9EQH3 Sirpa-213ENSMUST00000163034 677 ntTSL 3 BASIC14.69□□□□□ -0.06
Vps35Q9EQH3 Rpph1-201ENSMUST00000175096 319 ntBASIC14.69□□□□□ -0.06
Vps35Q9EQH3 Gm2756-201ENSMUST00000195851 400 ntBASIC14.69□□□□□ -0.06
Vps35Q9EQH3 Cyba-202ENSMUST00000212600 638 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Vps35Q9EQH3 Pecr-202ENSMUST00000097698 932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Vps35Q9EQH3 Olfr520-201ENSMUST00000098264 951 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
Vps35Q9EQH3 Zbtb7b-204ENSMUST00000107435 4333 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Vps35Q9EQH3 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Vps35Q9EQH3 Myrf-201ENSMUST00000088013 5674 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
Vps35Q9EQH3 Inha-201ENSMUST00000037330 1475 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Vps35Q9EQH3 Gm26852-201ENSMUST00000180691 5751 ntTSL 5 BASIC14.69□□□□□ -0.06
Vps35Q9EQH3 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Vps35Q9EQH3 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC14.69□□□□□ -0.06
Vps35Q9EQH3 Serp1-201ENSMUST00000029385 4611 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Vps35Q9EQH3 AI849053-201ENSMUST00000181021 2658 ntTSL 3 BASIC14.69□□□□□ -0.06
Vps35Q9EQH3 Nsun7-203ENSMUST00000201100 2775 ntAPPRIS P3 TSL 5 BASIC14.68□□□□□ -0.06
Vps35Q9EQH3 Luc7l3-201ENSMUST00000021226 3373 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Vps35Q9EQH3 Lancl3-201ENSMUST00000069763 3991 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Vps35Q9EQH3 Las1l-201ENSMUST00000079987 2530 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Vps35Q9EQH3 Thap12-201ENSMUST00000033009 3723 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Vps35Q9EQH3 Tchp-201ENSMUST00000094441 2882 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Vps35Q9EQH3 Luc7l-203ENSMUST00000119928 1441 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
Vps35Q9EQH3 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
Vps35Q9EQH3 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Vps35Q9EQH3 Gm12462-201ENSMUST00000140826 3056 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Vps35Q9EQH3 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Vps35Q9EQH3 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC14.68□□□□□ -0.06
Vps35Q9EQH3 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Vps35Q9EQH3 9330121J05Rik-201ENSMUST00000192267 3009 ntBASIC14.68□□□□□ -0.06
Vps35Q9EQH3 Gm43195-201ENSMUST00000200614 2332 ntBASIC14.68□□□□□ -0.06
Vps35Q9EQH3 Slc4a2-201ENSMUST00000080067 4179 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Vps35Q9EQH3 Ppil3-202ENSMUST00000114345 1175 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Vps35Q9EQH3 Gm16151-201ENSMUST00000129696 639 ntTSL 3 BASIC14.68□□□□□ -0.06
Vps35Q9EQH3 Dpf3-205ENSMUST00000177801 1092 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Vps35Q9EQH3 Gm29456-201ENSMUST00000189894 768 ntTSL 3 BASIC14.68□□□□□ -0.06
Vps35Q9EQH3 Gm29909-201ENSMUST00000214500 922 ntTSL 5 BASIC14.68□□□□□ -0.06
Vps35Q9EQH3 Higd1a-206ENSMUST00000215300 605 ntAPPRIS P1 TSL 3 BASIC14.68□□□□□ -0.06
Vps35Q9EQH3 Cfdp1-201ENSMUST00000034432 1178 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Vps35Q9EQH3 Crygn-201ENSMUST00000047119 768 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Vps35Q9EQH3 Hcrt-201ENSMUST00000055083 586 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Vps35Q9EQH3 C1qtnf2-201ENSMUST00000057679 1211 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Vps35Q9EQH3 Crxos-201ENSMUST00000098801 934 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Vps35Q9EQH3 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
Vps35Q9EQH3 Ptk7-201ENSMUST00000044442 4255 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Vps35Q9EQH3 Mms22l-201ENSMUST00000050446 4261 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Vps35Q9EQH3 Mast2-201ENSMUST00000003908 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Vps35Q9EQH3 Hacd4-201ENSMUST00000030221 2089 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Vps35Q9EQH3 Gm26534-201ENSMUST00000181687 1724 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Vps35Q9EQH3 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Vps35Q9EQH3 Fuz-213ENSMUST00000209039 1453 ntTSL 5 BASIC14.68□□□□□ -0.06
Vps35Q9EQH3 Gm45546-201ENSMUST00000211053 2394 ntBASIC14.68□□□□□ -0.06
Vps35Q9EQH3 Cdkn1b-201ENSMUST00000003115 2393 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Vps35Q9EQH3 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Vps35Q9EQH3 Gm8096-201ENSMUST00000209921 1591 ntBASIC14.68□□□□□ -0.06
Vps35Q9EQH3 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Vps35Q9EQH3 Dtd2-201ENSMUST00000021339 2564 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Vps35Q9EQH3 Abcf2-201ENSMUST00000030795 2569 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Vps35Q9EQH3 Mok-202ENSMUST00000070565 1693 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Vps35Q9EQH3 Abhd16b-201ENSMUST00000069649 1775 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
Vps35Q9EQH3 Pcdha11-202ENSMUST00000115657 5360 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Vps35Q9EQH3 Uros-203ENSMUST00000106145 1644 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Vps35Q9EQH3 Tpi1-205ENSMUST00000172132 1607 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Vps35Q9EQH3 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Vps35Q9EQH3 Erbb2-201ENSMUST00000058295 5012 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Vps35Q9EQH3 Cnn2-202ENSMUST00000105374 926 ntTSL 5 BASIC14.67□□□□□ -0.06
Vps35Q9EQH3 Park7-204ENSMUST00000105675 882 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
Vps35Q9EQH3 Asphd1-202ENSMUST00000106339 518 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
Vps35Q9EQH3 Slpi-201ENSMUST00000109367 876 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Vps35Q9EQH3 Gm24513-201ENSMUST00000174964 138 ntBASIC14.67□□□□□ -0.06
Vps35Q9EQH3 Gm27397-201ENSMUST00000184997 107 ntBASIC14.67□□□□□ -0.06
Vps35Q9EQH3 Idh2-207ENSMUST00000206714 392 ntTSL 3 BASIC14.67□□□□□ -0.06
Vps35Q9EQH3 Tspan32-211ENSMUST00000207211 1220 ntTSL 5 BASIC14.67□□□□□ -0.06
Vps35Q9EQH3 CT025555.1-201ENSMUST00000225901 1217 ntBASIC14.67□□□□□ -0.06
Vps35Q9EQH3 Galnt14-201ENSMUST00000024858 2990 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Vps35Q9EQH3 Gnmt-201ENSMUST00000002846 1035 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Vps35Q9EQH3 Khk-201ENSMUST00000031053 1257 ntTSL 5 BASIC14.67□□□□□ -0.06
Vps35Q9EQH3 Cul7-201ENSMUST00000043464 5530 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Vps35Q9EQH3 Spr-201ENSMUST00000045986 1230 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Vps35Q9EQH3 Lce1f-201ENSMUST00000047153 728 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Vps35Q9EQH3 1500035N22Rik-201ENSMUST00000075081 865 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Vps35Q9EQH3 Akirin2-201ENSMUST00000084299 1397 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Vps35Q9EQH3 Lrp11-201ENSMUST00000019931 3386 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Vps35Q9EQH3 Gm38042-201ENSMUST00000191614 5208 ntBASIC14.67□□□□□ -0.06
Vps35Q9EQH3 Osbpl10-201ENSMUST00000046627 1872 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Vps35Q9EQH3 Lix1l-201ENSMUST00000062058 3312 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Vps35Q9EQH3 Tmpo-202ENSMUST00000072239 3533 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Vps35Q9EQH3 Atp13a3-202ENSMUST00000100013 7310 ntAPPRIS P4 TSL 5 BASIC14.67□□□□□ -0.06
Vps35Q9EQH3 Zfp90-203ENSMUST00000212606 2685 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Vps35Q9EQH3 Dhx9-201ENSMUST00000042141 4616 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
Vps35Q9EQH3 Mef2b-204ENSMUST00000110146 1342 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
Vps35Q9EQH3 Mesd-201ENSMUST00000094215 4492 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Vps35Q9EQH3 AC131743.5-201ENSMUST00000220775 1618 ntBASIC14.66□□□□□ -0.06
Vps35Q9EQH3 Ccdc103-201ENSMUST00000021307 1841 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Vps35Q9EQH3 Gm45504-201ENSMUST00000211407 2107 ntBASIC14.66□□□□□ -0.06
Vps35Q9EQH3 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Vps35Q9EQH3 Hsp90b1-201ENSMUST00000020238 2825 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Vps35Q9EQH3 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Vps35Q9EQH3 Ints8-203ENSMUST00000108319 3220 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Vps35Q9EQH3 Ctdp1-201ENSMUST00000036229 3713 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Vps35Q9EQH3 Col4a1-201ENSMUST00000033898 6615 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 47.3 ms