Protein–RNA interactions for Protein: Q9D7S9

Chmp5, Charged multivesicular body protein 5, mousemouse

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp5Q9D7S9 Stk16-201ENSMUST00000027401 2876 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Chmp5Q9D7S9 Fh1-201ENSMUST00000027810 2636 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Chmp5Q9D7S9 Col4a2-201ENSMUST00000033899 6450 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Chmp5Q9D7S9 Fgfr1op2-201ENSMUST00000037836 687 ntTSL 3 BASIC18.36■□□□□ 0.53
Chmp5Q9D7S9 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
Chmp5Q9D7S9 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Chmp5Q9D7S9 Ss18-201ENSMUST00000040924 3090 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
Chmp5Q9D7S9 Rubcn-201ENSMUST00000040986 5257 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
Chmp5Q9D7S9 Elac1-201ENSMUST00000041138 4971 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Chmp5Q9D7S9 Slfnl1-201ENSMUST00000062990 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Chmp5Q9D7S9 Prkcb-202ENSMUST00000064989 2911 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
Chmp5Q9D7S9 Zhx3-203ENSMUST00000109460 4480 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Chmp5Q9D7S9 Egr1-201ENSMUST00000064795 4484 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Chmp5Q9D7S9 Kcnc1-201ENSMUST00000025202 7760 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Chmp5Q9D7S9 A930033H14Rik-201ENSMUST00000170048 2969 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Chmp5Q9D7S9 Psap-202ENSMUST00000105465 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Chmp5Q9D7S9 Kif7-204ENSMUST00000184137 4093 ntAPPRIS P3 TSL 5 BASIC18.35■□□□□ 0.53
Chmp5Q9D7S9 Susd6-201ENSMUST00000068519 4977 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Chmp5Q9D7S9 Gm12503-201ENSMUST00000146576 3127 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Chmp5Q9D7S9 Noct-201ENSMUST00000023849 3059 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Chmp5Q9D7S9 Acr-201ENSMUST00000023295 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Chmp5Q9D7S9 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
Chmp5Q9D7S9 Six3os1-211ENSMUST00000176958 2889 ntTSL 2 BASIC18.35■□□□□ 0.53
Chmp5Q9D7S9 Gm45188-201ENSMUST00000207592 1369 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Chmp5Q9D7S9 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
Chmp5Q9D7S9 Tbc1d7-202ENSMUST00000179852 1246 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Chmp5Q9D7S9 CT010506.4-201ENSMUST00000225457 351 ntBASIC18.35■□□□□ 0.53
Chmp5Q9D7S9 AC147366.1-201ENSMUST00000227671 852 ntBASIC18.35■□□□□ 0.53
Chmp5Q9D7S9 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Chmp5Q9D7S9 Sdhc-201ENSMUST00000081560 815 ntTSL 3 BASIC18.35■□□□□ 0.53
Chmp5Q9D7S9 Hes2-201ENSMUST00000030782 2521 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Chmp5Q9D7S9 Kcnj12-201ENSMUST00000041944 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Chmp5Q9D7S9 Zfp467-205ENSMUST00000114560 3266 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Chmp5Q9D7S9 Zfp784-201ENSMUST00000062428 2153 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Chmp5Q9D7S9 Rundc1-201ENSMUST00000040561 3223 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Chmp5Q9D7S9 Fhad1-202ENSMUST00000105779 4263 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
Chmp5Q9D7S9 Dmkn-204ENSMUST00000085691 2007 ntAPPRIS P4 TSL 1 (best) BASIC18.35■□□□□ 0.53
Chmp5Q9D7S9 Skida1-201ENSMUST00000066885 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Chmp5Q9D7S9 Gm39244-202ENSMUST00000210837 1857 ntTSL 5 BASIC18.35■□□□□ 0.53
Chmp5Q9D7S9 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Chmp5Q9D7S9 Ociad2-205ENSMUST00000201908 2378 ntTSL 2 BASIC18.34■□□□□ 0.53
Chmp5Q9D7S9 Sohlh2-201ENSMUST00000029369 2364 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Chmp5Q9D7S9 Grid2ip-202ENSMUST00000110733 3825 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Chmp5Q9D7S9 Ubiad1-201ENSMUST00000051633 2992 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Chmp5Q9D7S9 Rrp1b-201ENSMUST00000081339 4874 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Chmp5Q9D7S9 Tulp3-205ENSMUST00000157005 1053 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Chmp5Q9D7S9 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC18.34■□□□□ 0.53
Chmp5Q9D7S9 Dusp13-208ENSMUST00000183698 1019 ntTSL 5 BASIC18.34■□□□□ 0.53
Chmp5Q9D7S9 Kcnk16-201ENSMUST00000024155 916 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
Chmp5Q9D7S9 Lamtor4-201ENSMUST00000062067 877 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Chmp5Q9D7S9 Trappc9-203ENSMUST00000168191 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Chmp5Q9D7S9 Olfr1411-202ENSMUST00000190844 1821 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
Chmp5Q9D7S9 Kif7-203ENSMUST00000183846 4577 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
Chmp5Q9D7S9 Cage1-202ENSMUST00000089840 3449 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Chmp5Q9D7S9 Mst1-201ENSMUST00000035211 2262 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Chmp5Q9D7S9 Adgrb2-206ENSMUST00000106018 4470 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
Chmp5Q9D7S9 Brpf1-210ENSMUST00000204626 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Chmp5Q9D7S9 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Chmp5Q9D7S9 Mbp-203ENSMUST00000075372 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Chmp5Q9D7S9 Gm14451-201ENSMUST00000121581 1542 ntBASIC18.33■□□□□ 0.53
Chmp5Q9D7S9 Atp2a3-201ENSMUST00000021142 4593 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.53
Chmp5Q9D7S9 Mfsd1-201ENSMUST00000029344 3011 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Chmp5Q9D7S9 Sh3glb1-201ENSMUST00000163279 3961 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Chmp5Q9D7S9 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Chmp5Q9D7S9 H2-T23-201ENSMUST00000102678 1472 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Chmp5Q9D7S9 Syt13-201ENSMUST00000028648 3761 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Chmp5Q9D7S9 Gm10110-201ENSMUST00000081204 1891 ntTSL 5 BASIC18.33■□□□□ 0.53
Chmp5Q9D7S9 Tmem110-201ENSMUST00000006701 3742 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Chmp5Q9D7S9 Espn-220ENSMUST00000207676 4618 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.53
Chmp5Q9D7S9 Gpr155-202ENSMUST00000076463 5061 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.53
Chmp5Q9D7S9 Zbed4-201ENSMUST00000041297 5425 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Chmp5Q9D7S9 Irf7-203ENSMUST00000106023 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
Chmp5Q9D7S9 Aqp3-201ENSMUST00000055327 1765 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Chmp5Q9D7S9 Arl5b-202ENSMUST00000069870 6981 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Chmp5Q9D7S9 Prr18-201ENSMUST00000069742 3407 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Chmp5Q9D7S9 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Chmp5Q9D7S9 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC18.33■□□□□ 0.52
Chmp5Q9D7S9 Tmem270-202ENSMUST00000201316 847 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Chmp5Q9D7S9 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC18.33■□□□□ 0.52
Chmp5Q9D7S9 Gm18669-201ENSMUST00000216049 778 ntBASIC18.33■□□□□ 0.52
Chmp5Q9D7S9 Catip-201ENSMUST00000097697 2101 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Chmp5Q9D7S9 Zfp574-202ENSMUST00000179556 4140 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Chmp5Q9D7S9 2310011J03Rik-201ENSMUST00000020341 1649 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Chmp5Q9D7S9 Otop3-202ENSMUST00000106543 2369 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Chmp5Q9D7S9 Myl12a-206ENSMUST00000148960 1937 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Chmp5Q9D7S9 Slc25a34-201ENSMUST00000038661 2670 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Chmp5Q9D7S9 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
Chmp5Q9D7S9 Slc8a3-203ENSMUST00000182208 3433 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
Chmp5Q9D7S9 Trim10-201ENSMUST00000060524 2245 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Chmp5Q9D7S9 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Chmp5Q9D7S9 Ppia-206ENSMUST00000213200 1450 ntTSL 5 BASIC18.33■□□□□ 0.52
Chmp5Q9D7S9 Tmc8-201ENSMUST00000050874 2577 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
Chmp5Q9D7S9 Erich6-201ENSMUST00000041115 2195 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
Chmp5Q9D7S9 Sh2b1-204ENSMUST00000205497 2854 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Chmp5Q9D7S9 Rinl-206ENSMUST00000209035 2898 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Chmp5Q9D7S9 Mocos-201ENSMUST00000068006 2884 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Chmp5Q9D7S9 Sipa1-204ENSMUST00000169854 3583 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
Chmp5Q9D7S9 Gm37500-201ENSMUST00000192059 1443 ntBASIC18.32■□□□□ 0.52
Chmp5Q9D7S9 Anxa2-201ENSMUST00000034756 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Chmp5Q9D7S9 Tm6sf2-201ENSMUST00000049197 1418 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 38.8 ms