Protein–RNA interactions for Protein: Q9D6J4

Necab3, N-terminal EF-hand calcium-binding protein 3, mousemouse

Predictions only

Length 353 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Necab3Q9D6J4 Bccip-201ENSMUST00000033282 1244 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Necab3Q9D6J4 Hps1-201ENSMUST00000026194 2647 ntAPPRIS P3 TSL 5 BASIC14.82□□□□□ -0.04
Necab3Q9D6J4 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Necab3Q9D6J4 Tbx3-202ENSMUST00000079719 4982 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Necab3Q9D6J4 Fzd7-201ENSMUST00000114246 4532 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
Necab3Q9D6J4 Sema6d-201ENSMUST00000051419 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Necab3Q9D6J4 Art3-205ENSMUST00000120193 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Necab3Q9D6J4 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Necab3Q9D6J4 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Necab3Q9D6J4 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Necab3Q9D6J4 Krt20-201ENSMUST00000017743 1927 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Necab3Q9D6J4 Cables1-202ENSMUST00000171109 3396 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Necab3Q9D6J4 Acrbp-205ENSMUST00000112414 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Necab3Q9D6J4 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Necab3Q9D6J4 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Necab3Q9D6J4 Sfta3-ps-205ENSMUST00000220379 2187 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Necab3Q9D6J4 Rgs6-203ENSMUST00000185665 2201 ntAPPRIS P4 TSL 5 BASIC14.81□□□□□ -0.04
Necab3Q9D6J4 Slc17a9-201ENSMUST00000094218 2275 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
Necab3Q9D6J4 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Necab3Q9D6J4 AI606473-201ENSMUST00000177201 1731 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Necab3Q9D6J4 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Necab3Q9D6J4 Asic1-201ENSMUST00000023758 4114 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Necab3Q9D6J4 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
Necab3Q9D6J4 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Necab3Q9D6J4 Grm6-204ENSMUST00000171427 4330 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
Necab3Q9D6J4 Llgl1-201ENSMUST00000052346 4303 ntAPPRIS P4 TSL 1 (best) BASIC14.81□□□□□ -0.04
Necab3Q9D6J4 Supt5-208ENSMUST00000209141 3755 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Necab3Q9D6J4 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC14.81□□□□□ -0.04
Necab3Q9D6J4 Crybb3-205ENSMUST00000120506 804 ntAPPRIS P1 TSL 3 BASIC14.81□□□□□ -0.04
Necab3Q9D6J4 Cyba-201ENSMUST00000017604 744 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Necab3Q9D6J4 Gm5108-201ENSMUST00000177891 543 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Necab3Q9D6J4 4833428L15Rik-201ENSMUST00000181230 1259 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Necab3Q9D6J4 Tpi-rs2-201ENSMUST00000182471 756 ntBASIC14.81□□□□□ -0.04
Necab3Q9D6J4 Sar1b-201ENSMUST00000020653 1201 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Necab3Q9D6J4 Ppcdc-205ENSMUST00000214144 724 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Necab3Q9D6J4 S100a7a-201ENSMUST00000079286 1280 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Necab3Q9D6J4 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Necab3Q9D6J4 Arpc4-203ENSMUST00000203578 1323 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Necab3Q9D6J4 H1fnt-201ENSMUST00000060855 1326 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
Necab3Q9D6J4 Vav1-204ENSMUST00000169220 2810 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Necab3Q9D6J4 Gas2l3-207ENSMUST00000220128 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Necab3Q9D6J4 BC037039-201ENSMUST00000192003 2205 ntBASIC14.81□□□□□ -0.04
Necab3Q9D6J4 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Necab3Q9D6J4 Tom1-202ENSMUST00000165630 2267 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Necab3Q9D6J4 Acot10-201ENSMUST00000052910 1537 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
Necab3Q9D6J4 Npr3-201ENSMUST00000066529 6892 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Necab3Q9D6J4 Mapk8ip2-201ENSMUST00000023291 5558 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Necab3Q9D6J4 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
Necab3Q9D6J4 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Necab3Q9D6J4 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
Necab3Q9D6J4 Asic1-205ENSMUST00000228185 1818 ntBASIC14.8□□□□□ -0.04
Necab3Q9D6J4 Camta1-202ENSMUST00000097774 8533 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
Necab3Q9D6J4 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Necab3Q9D6J4 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Necab3Q9D6J4 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Necab3Q9D6J4 Wac-201ENSMUST00000074919 3070 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Necab3Q9D6J4 Mapk9-210ENSMUST00000178543 4677 ntAPPRIS ALT1 TSL 5 BASIC14.8□□□□□ -0.04
Necab3Q9D6J4 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Necab3Q9D6J4 Kif21a-201ENSMUST00000067205 6307 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Necab3Q9D6J4 Gm4875-201ENSMUST00000118257 786 ntBASIC14.8□□□□□ -0.04
Necab3Q9D6J4 1700055C04Rik-201ENSMUST00000176450 355 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Necab3Q9D6J4 Gm3436-201ENSMUST00000179930 840 ntBASIC14.8□□□□□ -0.04
Necab3Q9D6J4 Gm42196-201ENSMUST00000209618 730 ntTSL 5 BASIC14.8□□□□□ -0.04
Necab3Q9D6J4 Gm26953-206ENSMUST00000212840 619 ntTSL 5 BASIC14.8□□□□□ -0.04
Necab3Q9D6J4 Armc12-201ENSMUST00000025060 1083 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Necab3Q9D6J4 Cav3-201ENSMUST00000075477 1157 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Necab3Q9D6J4 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Necab3Q9D6J4 Psmc3-202ENSMUST00000067663 1636 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Necab3Q9D6J4 Malt1-201ENSMUST00000049248 5073 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Necab3Q9D6J4 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
Necab3Q9D6J4 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
Necab3Q9D6J4 Tpcn1-201ENSMUST00000046426 4712 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Necab3Q9D6J4 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Necab3Q9D6J4 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Necab3Q9D6J4 Vwa5b2-203ENSMUST00000100074 2512 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
Necab3Q9D6J4 Ccdc160-201ENSMUST00000101588 1536 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Necab3Q9D6J4 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Necab3Q9D6J4 Oprl1-203ENSMUST00000108766 1241 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Necab3Q9D6J4 Dnajc5-202ENSMUST00000108796 934 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
Necab3Q9D6J4 Mrpl53-201ENSMUST00000113938 695 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Necab3Q9D6J4 Cdpf1-202ENSMUST00000125947 706 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
Necab3Q9D6J4 Gm12212-201ENSMUST00000141032 378 ntTSL 3 BASIC14.79□□□□□ -0.04
Necab3Q9D6J4 Adgrg5-205ENSMUST00000166802 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Necab3Q9D6J4 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Necab3Q9D6J4 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Necab3Q9D6J4 Ank3-223ENSMUST00000182557 1569 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Necab3Q9D6J4 Psmd12-201ENSMUST00000021063 1904 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Necab3Q9D6J4 AC151828.1-201ENSMUST00000219552 661 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Necab3Q9D6J4 4930459C07Rik-202ENSMUST00000219638 1805 ntTSL 5 BASIC14.79□□□□□ -0.04
Necab3Q9D6J4 Gm6218-201ENSMUST00000219812 628 ntBASIC14.79□□□□□ -0.04
Necab3Q9D6J4 Adk-207ENSMUST00000224069 1818 ntAPPRIS ALT1 BASIC14.79□□□□□ -0.04
Necab3Q9D6J4 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Necab3Q9D6J4 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Necab3Q9D6J4 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Necab3Q9D6J4 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
Necab3Q9D6J4 Fam162a-201ENSMUST00000004057 635 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Necab3Q9D6J4 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Necab3Q9D6J4 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Necab3Q9D6J4 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Necab3Q9D6J4 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 35.6 ms