Protein–RNA interactions for Protein: Q9D1H0

Rita1, RBPJ-interacting and tubulin-associated protein 1, mousemouse

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rita1Q9D1H0 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
Rita1Q9D1H0 Iffo1-201ENSMUST00000117675 2833 ntAPPRIS P4 TSL 1 (best) BASIC13.49□□□□□ -0.25
Rita1Q9D1H0 Farp2-202ENSMUST00000122402 2816 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Rita1Q9D1H0 Tnnc2-201ENSMUST00000103095 700 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Rita1Q9D1H0 Gm14268-201ENSMUST00000132465 682 ntTSL 3 BASIC13.49□□□□□ -0.25
Rita1Q9D1H0 Gm13496-201ENSMUST00000141133 1165 ntTSL 2 BASIC13.49□□□□□ -0.25
Rita1Q9D1H0 Gm20646-202ENSMUST00000199521 660 ntTSL 3 BASIC13.49□□□□□ -0.25
Rita1Q9D1H0 Rbfox2-208ENSMUST00000227930 1218 ntBASIC13.49□□□□□ -0.25
Rita1Q9D1H0 Krtap19-4-201ENSMUST00000051103 304 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
Rita1Q9D1H0 Tmem116-202ENSMUST00000060004 1297 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
Rita1Q9D1H0 Usp51-201ENSMUST00000095755 2204 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Rita1Q9D1H0 Lgi3-201ENSMUST00000047331 3174 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Rita1Q9D1H0 Cald1-201ENSMUST00000031775 2142 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
Rita1Q9D1H0 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Rita1Q9D1H0 Dyx1c1-202ENSMUST00000098567 1612 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
Rita1Q9D1H0 Elf3-201ENSMUST00000003135 2095 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
Rita1Q9D1H0 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Rita1Q9D1H0 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
Rita1Q9D1H0 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Rita1Q9D1H0 Tle1-202ENSMUST00000072695 3644 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Rita1Q9D1H0 Stra8-203ENSMUST00000114999 1455 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Rita1Q9D1H0 Sftpb-204ENSMUST00000183018 1490 ntAPPRIS P2 TSL 5 BASIC13.48□□□□□ -0.25
Rita1Q9D1H0 Ppp2r5b-201ENSMUST00000025695 2742 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Rita1Q9D1H0 A530083I20Rik-203ENSMUST00000214426 1855 ntTSL 5 BASIC13.48□□□□□ -0.25
Rita1Q9D1H0 Gm10110-201ENSMUST00000081204 1891 ntTSL 5 BASIC13.48□□□□□ -0.25
Rita1Q9D1H0 Smyd4-201ENSMUST00000044530 3517 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Rita1Q9D1H0 Grm6-204ENSMUST00000171427 4330 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
Rita1Q9D1H0 Dnajb12-201ENSMUST00000020309 2238 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Rita1Q9D1H0 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
Rita1Q9D1H0 Rnf44-201ENSMUST00000037422 3734 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Rita1Q9D1H0 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Rita1Q9D1H0 Ydjc-202ENSMUST00000115702 1713 ntTSL 5 BASIC13.48□□□□□ -0.25
Rita1Q9D1H0 Aggf1-201ENSMUST00000022189 3249 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Rita1Q9D1H0 Slc9a3r2-202ENSMUST00000019684 1688 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Rita1Q9D1H0 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Rita1Q9D1H0 Tinf2-205ENSMUST00000227842 2001 ntAPPRIS ALT2 BASIC13.48□□□□□ -0.25
Rita1Q9D1H0 Ppil3-203ENSMUST00000114348 1033 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Rita1Q9D1H0 Gm13823-201ENSMUST00000119930 345 ntBASIC13.48□□□□□ -0.25
Rita1Q9D1H0 Gm15693-201ENSMUST00000120470 637 ntBASIC13.48□□□□□ -0.25
Rita1Q9D1H0 Hras-203ENSMUST00000124314 1073 ntTSL 5 BASIC13.48□□□□□ -0.25
Rita1Q9D1H0 Nespas-202ENSMUST00000150276 1262 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Rita1Q9D1H0 AA543401-201ENSMUST00000164248 1269 ntBASIC13.48□□□□□ -0.25
Rita1Q9D1H0 Erdr1-204ENSMUST00000179483 688 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Rita1Q9D1H0 Gm27618-201ENSMUST00000183671 60 ntBASIC13.48□□□□□ -0.25
Rita1Q9D1H0 5430427M07Rik-202ENSMUST00000221524 1023 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Rita1Q9D1H0 Npb-201ENSMUST00000061309 418 ntTSL 3 BASIC13.48□□□□□ -0.25
Rita1Q9D1H0 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Rita1Q9D1H0 Tomm70a-201ENSMUST00000166897 3778 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Rita1Q9D1H0 Sema4c-203ENSMUST00000191677 3779 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
Rita1Q9D1H0 Slc38a7-201ENSMUST00000040481 3333 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Rita1Q9D1H0 Ano8-201ENSMUST00000093450 3653 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Rita1Q9D1H0 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Rita1Q9D1H0 Zbtb33-202ENSMUST00000115142 2567 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Rita1Q9D1H0 Zmym3-208ENSMUST00000121429 1890 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Rita1Q9D1H0 Disp2-202ENSMUST00000063975 1505 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Rita1Q9D1H0 4921504A21Rik-201ENSMUST00000180594 2156 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Rita1Q9D1H0 Mfsd2a-201ENSMUST00000030408 2151 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Rita1Q9D1H0 Ppia-206ENSMUST00000213200 1450 ntTSL 5 BASIC13.48□□□□□ -0.25
Rita1Q9D1H0 Syn2-201ENSMUST00000009538 2708 ntAPPRIS P4 TSL 1 (best) BASIC13.48□□□□□ -0.25
Rita1Q9D1H0 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Rita1Q9D1H0 Map7d1-203ENSMUST00000122129 3249 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
Rita1Q9D1H0 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
Rita1Q9D1H0 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Rita1Q9D1H0 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Rita1Q9D1H0 Plekhb1-207ENSMUST00000116287 1911 ntAPPRIS ALT1 TSL 3 BASIC13.47□□□□□ -0.25
Rita1Q9D1H0 Spcs2-210ENSMUST00000209032 1610 ntTSL 5 BASIC13.47□□□□□ -0.25
Rita1Q9D1H0 Phyhd1-204ENSMUST00000113645 1325 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Rita1Q9D1H0 Rfc3-201ENSMUST00000038131 1317 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Rita1Q9D1H0 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
Rita1Q9D1H0 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Rita1Q9D1H0 Nsun7-203ENSMUST00000201100 2775 ntAPPRIS P3 TSL 5 BASIC13.47□□□□□ -0.25
Rita1Q9D1H0 Ankrd44-201ENSMUST00000044359 6192 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
Rita1Q9D1H0 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC13.47□□□□□ -0.25
Rita1Q9D1H0 Cd209f-202ENSMUST00000138439 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Rita1Q9D1H0 Cd209f-203ENSMUST00000145007 1186 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Rita1Q9D1H0 Gm15458-201ENSMUST00000156950 709 ntTSL 5 BASIC13.47□□□□□ -0.25
Rita1Q9D1H0 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC13.47□□□□□ -0.25
Rita1Q9D1H0 Auts2-212ENSMUST00000178555 309 ntBASIC13.47□□□□□ -0.25
Rita1Q9D1H0 AC124732.2-201ENSMUST00000221977 316 ntBASIC13.47□□□□□ -0.25
Rita1Q9D1H0 Slc23a3-201ENSMUST00000027405 2059 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Rita1Q9D1H0 Sppl2b-201ENSMUST00000035597 2869 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Rita1Q9D1H0 Tmem59l-201ENSMUST00000045286 1491 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Rita1Q9D1H0 Prkcd-207ENSMUST00000112210 2777 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
Rita1Q9D1H0 Gm26850-201ENSMUST00000181653 2669 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Rita1Q9D1H0 Reep1-201ENSMUST00000121469 3924 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Rita1Q9D1H0 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Rita1Q9D1H0 Gatm-201ENSMUST00000028624 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Rita1Q9D1H0 Tbx15-201ENSMUST00000029462 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Rita1Q9D1H0 Lix1l-201ENSMUST00000062058 3312 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Rita1Q9D1H0 Rexo4-202ENSMUST00000114020 2278 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Rita1Q9D1H0 Arid5a-201ENSMUST00000097778 2270 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Rita1Q9D1H0 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
Rita1Q9D1H0 Gm15920-201ENSMUST00000118998 402 ntBASIC13.46□□□□□ -0.25
Rita1Q9D1H0 Gm12264-201ENSMUST00000123949 500 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Rita1Q9D1H0 Ccnh-202ENSMUST00000163600 1055 ntTSL 5 BASIC13.46□□□□□ -0.25
Rita1Q9D1H0 Zfp511-201ENSMUST00000168194 1076 ntAPPRIS P1 TSL 2 BASIC13.46□□□□□ -0.25
Rita1Q9D1H0 Arpp19-210ENSMUST00000170308 429 ntAPPRIS P1 TSL 2 BASIC13.46□□□□□ -0.25
Rita1Q9D1H0 Gm20650-201ENSMUST00000175690 198 ntTSL 3 BASIC13.46□□□□□ -0.25
Rita1Q9D1H0 Prok2-204ENSMUST00000203738 695 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Rita1Q9D1H0 Tmem86b-204ENSMUST00000206610 522 ntTSL 3 BASIC13.46□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 50.8 ms