Protein–RNA interactions for Protein: Q9CZA6

Nde1, Nuclear distribution protein nudE homolog 1, mousemouse

Predictions only

Length 344 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nde1Q9CZA6 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC14.35□□□□□ -0.11
Nde1Q9CZA6 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Nde1Q9CZA6 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Nde1Q9CZA6 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Nde1Q9CZA6 Gm13003-201ENSMUST00000151040 2904 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Nde1Q9CZA6 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Nde1Q9CZA6 Plekha1-201ENSMUST00000048180 3321 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Nde1Q9CZA6 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Nde1Q9CZA6 Il4ra-201ENSMUST00000033004 5256 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Nde1Q9CZA6 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Nde1Q9CZA6 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Nde1Q9CZA6 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Nde1Q9CZA6 Ash2l-202ENSMUST00000110608 2134 ntTSL 5 BASIC14.35□□□□□ -0.11
Nde1Q9CZA6 Atp2a3-202ENSMUST00000108484 4467 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Nde1Q9CZA6 Car10-203ENSMUST00000107858 2742 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Nde1Q9CZA6 Wbp11-201ENSMUST00000116514 2739 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Nde1Q9CZA6 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Nde1Q9CZA6 Fut9-202ENSMUST00000108199 2579 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Nde1Q9CZA6 Axdnd1-204ENSMUST00000178036 3586 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Nde1Q9CZA6 Mbp-205ENSMUST00000091789 4797 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Nde1Q9CZA6 Dnaaf1-201ENSMUST00000093100 2821 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Nde1Q9CZA6 Palm2-202ENSMUST00000102905 3271 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Nde1Q9CZA6 Dnm1-203ENSMUST00000113350 3258 ntAPPRIS ALT1 TSL 5 BASIC14.34□□□□□ -0.11
Nde1Q9CZA6 Dnmt3b-209ENSMUST00000109773 4148 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Nde1Q9CZA6 Syngap1-202ENSMUST00000177932 3927 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Nde1Q9CZA6 1300017J02Rik-201ENSMUST00000035163 2284 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Nde1Q9CZA6 Lpar1-201ENSMUST00000055018 3512 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Nde1Q9CZA6 Smyd1-203ENSMUST00000114188 2064 ntTSL 5 BASIC14.34□□□□□ -0.11
Nde1Q9CZA6 Tmem8b-202ENSMUST00000107865 4775 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Nde1Q9CZA6 Pde7b-205ENSMUST00000169404 1697 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Nde1Q9CZA6 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC14.34□□□□□ -0.11
Nde1Q9CZA6 Gm42769-201ENSMUST00000198576 1659 ntBASIC14.34□□□□□ -0.11
Nde1Q9CZA6 Stox2-201ENSMUST00000079195 10467 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Nde1Q9CZA6 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC14.34□□□□□ -0.11
Nde1Q9CZA6 Tfe3-211ENSMUST00000137467 3390 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Nde1Q9CZA6 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Nde1Q9CZA6 Kctd20-203ENSMUST00000118762 3839 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Nde1Q9CZA6 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Nde1Q9CZA6 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC14.34□□□□□ -0.11
Nde1Q9CZA6 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC14.34□□□□□ -0.11
Nde1Q9CZA6 AC158538.2-201ENSMUST00000225455 906 ntBASIC14.34□□□□□ -0.11
Nde1Q9CZA6 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Nde1Q9CZA6 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Nde1Q9CZA6 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Nde1Q9CZA6 Col25a1-201ENSMUST00000080335 2624 ntAPPRIS P4 TSL 5 BASIC14.34□□□□□ -0.11
Nde1Q9CZA6 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Nde1Q9CZA6 Gtf2h1-201ENSMUST00000006774 2736 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Nde1Q9CZA6 Gns-201ENSMUST00000040344 3855 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Nde1Q9CZA6 Nudt18-201ENSMUST00000089049 3926 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Nde1Q9CZA6 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Nde1Q9CZA6 Pccb-201ENSMUST00000035116 2320 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Nde1Q9CZA6 Sp2-203ENSMUST00000107624 3055 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.11
Nde1Q9CZA6 Ttpa-202ENSMUST00000117632 3123 ntTSL 5 BASIC14.33□□□□□ -0.11
Nde1Q9CZA6 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Nde1Q9CZA6 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.11
Nde1Q9CZA6 Mecom-206ENSMUST00000172694 4381 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Nde1Q9CZA6 Slc52a3-201ENSMUST00000073228 2669 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Nde1Q9CZA6 Ssh3-202ENSMUST00000113852 2735 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Nde1Q9CZA6 Ssh3-201ENSMUST00000037992 2728 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Nde1Q9CZA6 Ubiad1-201ENSMUST00000051633 2992 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Nde1Q9CZA6 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Nde1Q9CZA6 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Nde1Q9CZA6 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Nde1Q9CZA6 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC14.33□□□□□ -0.12
Nde1Q9CZA6 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC14.33□□□□□ -0.12
Nde1Q9CZA6 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Nde1Q9CZA6 Col6a2-202ENSMUST00000105413 4653 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Nde1Q9CZA6 Reck-201ENSMUST00000030198 4433 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Nde1Q9CZA6 Emc7-201ENSMUST00000069747 5826 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Nde1Q9CZA6 D230025D16Rik-201ENSMUST00000034361 2916 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Nde1Q9CZA6 Ncor2-206ENSMUST00000111402 8862 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Nde1Q9CZA6 Spcs2-210ENSMUST00000209032 1610 ntTSL 5 BASIC14.33□□□□□ -0.12
Nde1Q9CZA6 Gm42928-201ENSMUST00000197338 3339 ntBASIC14.33□□□□□ -0.12
Nde1Q9CZA6 Cd3eap-201ENSMUST00000047036 2239 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Nde1Q9CZA6 Add3-202ENSMUST00000050096 4488 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Nde1Q9CZA6 Rxrb-202ENSMUST00000116612 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Nde1Q9CZA6 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Nde1Q9CZA6 Btbd10-201ENSMUST00000047091 2581 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Nde1Q9CZA6 Nat6-201ENSMUST00000093785 2053 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Nde1Q9CZA6 Ggn-202ENSMUST00000098609 2653 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Nde1Q9CZA6 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Nde1Q9CZA6 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Nde1Q9CZA6 Sim2-201ENSMUST00000072182 3670 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Nde1Q9CZA6 Rev3l-201ENSMUST00000019986 10713 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Nde1Q9CZA6 Bhlhb9-204ENSMUST00000180025 2812 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
Nde1Q9CZA6 Txlng-203ENSMUST00000112315 2525 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Nde1Q9CZA6 Arl6ip6-201ENSMUST00000028336 2548 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Nde1Q9CZA6 Nr4a3-201ENSMUST00000030025 5720 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Nde1Q9CZA6 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Nde1Q9CZA6 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC14.32□□□□□ -0.12
Nde1Q9CZA6 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC14.32□□□□□ -0.12
Nde1Q9CZA6 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC14.32□□□□□ -0.12
Nde1Q9CZA6 Vti1a-206ENSMUST00000225529 1244 ntBASIC14.32□□□□□ -0.12
Nde1Q9CZA6 Lancl1-202ENSMUST00000113979 4461 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Nde1Q9CZA6 Zfp367-201ENSMUST00000059817 3532 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Nde1Q9CZA6 Tcn2-204ENSMUST00000109990 1914 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Nde1Q9CZA6 8030474K03Rik-202ENSMUST00000151231 1940 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Nde1Q9CZA6 Gcfc2-201ENSMUST00000043195 4192 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Nde1Q9CZA6 Dnm1-201ENSMUST00000078352 3246 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Nde1Q9CZA6 Csrnp1-201ENSMUST00000035101 2906 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 28.5 ms